Skip navigation

DSpace

機構典藏 DSpace 系統致力於保存各式數位資料(如:文字、圖片、PDF)並使其易於取用。

點此認識 DSpace
DSpace logo
English
中文
  • 瀏覽論文
    • 校院系所
    • 出版年
    • 作者
    • 標題
    • 關鍵字
    • 指導教授
  • 搜尋 TDR
  • 授權 Q&A
    • 我的頁面
    • 接受 E-mail 通知
    • 編輯個人資料
  1. NTU Theses and Dissertations Repository
  2. 醫學院
  3. 法醫學科所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/89713
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor李俊億zh_TW
dc.contributor.advisorJames Chun-I Leeen
dc.contributor.author魏義峰zh_TW
dc.contributor.authorYi-Feng Weien
dc.date.accessioned2023-09-18T16:06:39Z-
dc.date.available2023-11-09-
dc.date.copyright2023-09-18-
dc.date.issued2023-
dc.date.submitted2023-06-26-
dc.identifier.citation[1] M. Krawczaj, J. Schmidtke, DNA Fingerprinting, Bios Scientific Publisher,1994, pp.17-18.
[2] S. K. Jurel, 2012. Tooth Pulp: A Foundation for DNA Analysis, Journal of Forensic Research. 3, e111. https://doi:10.4172/2157-7145.1000e111.
[3] F. X. Ricaut, C. Keyser-Tracqui, E. Crunezy, B. Ludes, STR-genotyping from human medieval tooth and bone samples. Forensic Science International. 151(2005) 31-35.
[4] M. T .Gilbert, L. Rudbeck, E. Willerslev, A. J. Hansen, C. Smith, K. E .H .Penkman, K. Prangenberg, C. M. NielsonMarsh, M. E .Jans, P. Arthur, N. Lynnerup, G. urner-Walker, M. Biddle, B Kjolbye-Biddle, M. J. Collins, Biochemical and physical correlates of DNA contamination in archaeological human bones and teeth excavated at Matera , Italy, Journal of Archaeological Science .32 (2005)785-793. https://doi: 10.1016/j.jas.2004.12.008.
[5] C. Sosa, M. Baeta, C. Nunez, Y. Casalod, A. Luna, B. Martinnez-Jarreta, Nuclear DNA typing from ancient teeth, The American Journal of Forensic Medicine and Pathology.33(2012) 211-214. https://doi: 10.1097/PAF.0b013e3181fe3401.
[6] A. Milos, A. Selmanovic, L. Smajlovic, R. L. Huel, C. Katzmarzk, A. Rizvic, T .Parsons, Success rates of nuclear short tandem repeat typing from different skeletal elements, Croatian Medical Journal.48 (2007) 486-493.
[7] R. Gaytmenn, D. Sweet, Quantification of forensic DNA from various regions of human teeth, Journal Forensic Sciences. 48 (2003) 622-625.
[8] V. Pinchi, F. Torricelli, A.L. Nutini, M. Conti, S.A. Norelli, Techniques of dental DNA extraction: some operative experiences, Forensic Science International. 204 (2011)111-114. https://doi: 10.1016/j.forsciint.2010.05.010.
[9] A. Bertacci, S. Chersoni, C.L. Davidson, C. Prati, In vivo enamel fluid movement, European Journal of Oral Sciences. 115 (2007) 111-114. https://doi: 10.1111/j.1600-0722.2007.00445. x.
[10] D.J. Chiego, Histology of the pulp, J.K. Avery, P.F. Steele, N. Avery (Eda), Oral Development and Histology, Thieme Medical Publishers, New York, 2002, pp.190-212.
[11] C. Yu, P.V. Abbort, An overview of the dental pulp: its functions and responses to injury, Australian Dental Journal. Supplement 52(2007) s4-s16. https:// doi: 10.1111/j.1834-7819. 2007.tb00525. x.
[12] M. Vavpotic, T. Turk, D.S. Martincie, J. Balazic, Characteristics of the number of odontoblasts in human dental pulp post-mortem, Forensic Science International .193 (2009) 122-126. https://doi: 10.1016/j.forsciint.2009.09.023.
[13] F.J. Vertucci, R.l. Anthony, A scanning electron microscopic investigation of accessory foramina in the furcation and pulp chamber floor of molar teeth, Oral Surgery, Oral Medicine, and Oral Pathology. 62 (1986) 319-326. https://doi: 10.1016/0030-4220(86)90015-0.
[14] P. Kanokwongnuwut, B. Martin, D. Taylor, K. P. Kirkbride, A. Linacre, How many cells are required for successful DNA profiling? Forensic Science International Genetics. 51 (2021) 102453-102463. https://doi.org/10.1016/j.fsigen.2020.102453
[15] H. Mornstad, H. Pfeiffer, C. Yoon, A. Teivens, Demonstration and semi-quantification of mtDNA from human dentine and its relation to age, International Journal of Legal Medicine. 112 (1999) 98-100. https://doi: 10.1007/s004140050209.
[16] S. Bernick, C. Nedelman, Effect of aging on the human pulp, Journal of Endodontics. 1 (1975) 88-94. https:// doi: 10.1016/S0099-2399(75)80024-0.
[17] P. Hunter, Pulling teeth from history, EMBO reports.15 (2014) 923-925. https://doi: 10.15252/embr.201439353.
[18] P. Zaslanskyu, S. Zabler, P. Fratzi, 3D variations in human crown dentin tubule orientation: a phase-contrast microtomography study, Dental Materials. 26 (2009) e1-e10. https://doi: 10.1016/j.dental.2009.09.007.
[19] T. Yamamoto, M. Li, Z. Lui, Y. Guo, T. Hasegawa, H. Masuki, R. Suzuki, N. Amizuka, Histological review of the human cellular cementum with special reference to an alternating lamellar pattern, Odontology .98 (2010) 102-109. https://doi: 10.1007/s10266-010-0134-3.
[20] D.D. Bossharct, Are cementoblasts a subpopulation of osteoblasts or a unique phenotype, Journal of Dental Research. 84 (2005) 390-406. https//doi: 10.1177/154405910508400501.
[21] S.I. Kvaal, T. Solheim, D. Bjerketvedt, Evaluation of preparation, staining and microscopic techniques for counting incremental lines in cementum of human teeth, Biotechnic and Histochemistry .71 (1996) 165-172. https://doi: 10.3109/10520299609117155.
[22] N. Zhao, B. Foster, L. Bonewald, The cementocyte - an osteocyte relative? Journal of Dental Research. 95 (2016) 734-741. https://doi: 10.1177/0022034516641898
[23] D. De Leo, S. Turrina, M. Marigo, Effects of individual dental factors on genomic DNA analysis, American Journal of Forensic Medical Pathology. 21 (2000) 411-415. https://doi.org/10.1097/00000433-200012000-00023
[24] D. Higgins, J.J. Austin, Teeth as a source of DNA for forensic identification of human remains: A Review, Science and Justice .52 (2013) 433-441. https://doi: 10.1016/j.scijus.2013.06.001.
[25] P.C. Malaver, J.J. Yunid, Different dental tissues as a source of DNA for human identification in forensic cases, Croatian Medical Journal .44 (2003) 306-309.
[26] K. Sinhg Soodan, P. Priyadarshn, R. Kshirsaga, J. Pal Singh, Scope and Application of Forensic Dentistry, The International of Science &Technology. 2 (2014) 292-297.
[27] A. Alvarez Garcia, I. Munoz, C. Pestoni, M.V. Lareu, M.S. Rodriguez-Calvo, A. Carracdo, Effect of environmental factors on PCR-DNA analysis from dental pulp, International Journal of Legal Medicine. 109 (1996) 125-129. https:// doi: 10.1007/BF01369671
[28] E. Harney et al., A minimally destructive protocol for DNA extraction from ancient teeth, Genome Research. 31 (2021) 472-483. https://doi: 10.1101/GR.267534.120.
[29] D. Higgins, J. Kaidonis, G. Townsend, T. Hughes, J.J. Austin, Targeted sampling of cementum for recovery of nuclear DNA form human teeth and the impact of common decontamination measures, Investigative genetics. 4 (2013) 8-18. https://doi: 10.1186/2041-2223-4-18.
[30] R. Pinhasi, D. Fernandes, K. Sirak, M. Novak, S. Connell, F.A. Gerritsen, Optimal ancient DNA yields from the inner ear part of the human petrous bone, PLoS One. 10 (2015) e0129102. https://doi: 10.1371/journal.pone.0129102
[31] A.E. Nizel, J.M. Navia, J.R. Moor, R.S. Harris, Quantitative technique for pulverizing rodent teeth, Journal of Dental Research. 43 (1964) 995-1260. https://doi.org/10.1177/00220345640430064201.
[32] C.Y. Shiroma, C.G. Fielding, J.A. Lewis, M.R. Gleisner, K.N. Dunn, A minimally destructive technique for sampling dentine powder for mitochondrial DNA testing, Journal of Forensic Science. 49 (2004) 1-5.
[33] C. Cafiero, A. Re, E. Stigliano, E. Bassotti, R. Moroni, C. Grippaudo, Optimization of DNA extraction from dental remains, Electrophoresis. 40 (2019) 1820-1823. https://doi.org/10.1002/elps.201900142.
[34] S. Hughes-Stamm, F. Warnke, A.van Daal, An alternate method for extracting DNA from environmentally challenged teeth for improved DNA analysis, Legal Medicine. 18 (2016) 31-36. https://doi: 10.1016/j.legalmed.2015.11.008.
[35] Y. D. Alakoç, P. S. Aka, “Orthograde entrance technique” to recover DNA from ancient teeth preserving the physical structure, Forensic Science International. 188 (2009) 96-98. https://doi: 10.1016/j.forsciint.2009.03.020.
[36] N. Zhao, B. Foster, L. Bonewald, The cementocyte - an osteocyte relative? Journal of Dental Research. 95 (2016) 734-741. https://doi: 10.1177/0022034516641898.
[37] HB. Hansen, PB. Damgaard, A. Margaryan, J. Stenderup, N. Lynnerup, E. Willerslev, ME. Allentoft, Comparing ancient DNA preservation in petrous bone and tooth cementum, PLoS One 12 (2017) e0170940. https://doi: 10.1371/journal.pone.0170940.
[38] C. Davis, M. Illescas, C. Tirado, R. Lopez, B. Budowle, T.D. Cruz, A case of Amelogenin Y null: a simple primer binding site mutation of unusual genetic anomaly? Legal Medicine (Tokyo). 14(6) (2012) 320-323. https://doi: 10.1016/j.legalmed.2012.05.002.
[39] M. J. Ludeman, Z. Chang, J. J. Mulero, R. E. Lagacé, L. K. Hennessy, M. L. Short, D. Y. Wang, Developmental validation of GlobalFiler™ PCR amplification kit: a 6-dye multiplex assay designed for amplification of casework samples, International Journal of Legal Medicine 132 (2018) 1555–1573. https://doi.org/10.1007/s00414-018-1817-5.
[40] S. Vernarecci, E. Ottaviani, A. Agostino, E. Mei, L. Calandro, P. Montagna, Quantifiler® Trio Kit and forensic samples management: A matter of degradation, Forensic Science of International Genetics 16 (2015) 77–85. https://doi.org/10.1016/j.fsigen.2014.12.005
[41] L. Potsch, U. Meyer, S. Rothschild, P. Schneider, C. Rittner, Application of DNA techniques for identification using human dental pulp as a source of DNA, International Journal of Legal Medicine 105 (1992) 139-143. https://doi: 10.1007/BF01625165.
[42] I. Stamfelj, G. Vidmat, E. Cvetko, D. Gaspersic, Cementum thickness in multirooted human molas: a histometric study by light microscopy, Annals of anatomy .190 (2008) 129-139. https:// doi: 10.1016/j.aanat.2007.10.006.
[43] Y. Ohno, Fine structural observations of age changes in cementocytes of human permanent teeth, Japanese Journal of Oral Biology 31(1989) 656-670 https://doi.org/10.230/joralbiosci1965.31.656.
-
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/89713-
dc.description.abstract牙齒可以作為人類遺骸基因組DNA的可靠來源。使用牙齒組織作為個體識別的 DNA 來源來自於其抵抗環境攻擊的特徵,例如焚燒、浸泡、創傷和肢解。從牙齒中提取 DNA 的傳統方法需要對牙齒進行完全機械破壞。雖然這方法簡單可靠,但對於希望進一步證據目的或人類學研究來說並不理想。牙齒細胞豐富的區域是牙髓 (pulp)和牙骨質(cementum)。 本研究分別採用牙髓和牙骨質樣本兩種對牙齒破壞最小的方法提取DNA進行個體鑑定。牙髓取樣是用牙科手機在牙齒的咬合面鑽孔,然後用牙銼取出牙髓和成牙本質細胞,然後用複合樹脂將孔回填。牙骨質取樣是用刀片刮牙根外表面的牙骨質。牙骨質的損失非常小,幾乎無法發現 本研究測試了 58 個埋藏和未埋藏的脫落牙齒樣本,以及 4 個法醫牙齒樣本。 將 DNA 產量和 STR 成功率與這兩種採樣方法進行了比較。 結果表明,牙骨質取樣在 DNA 質量和效率方面優於牙髓取樣。 這說明微生物在降解核DNA和降低 DNA 產量方面有至關重要的影響。門齒、小臼齒和大臼齒之間的STR基因分型成功率表明多牙根比單牙根提供更好的DNA數量和質量。在牙髓採集的樣本中,有蛀牙的牙齒的 DNA 產量非常少,而在牙骨質採集的樣本中則不然。如果牙齒型態保存是重中之重,那牙骨質取樣是一種理想的 DNA 提取方法。如果對病原菌 DNA 感興趣的話,從咬合方向鑽孔取牙髓可能是一種很好的替代方法,這兩種方法都可以在不破壞牙齒結構的情況下製備 DNA。zh_TW
dc.description.abstractThe teeth could serve as a reliable source of genomic DNA of human remains. Using dental tissues as a DNA source of individual identification is due to its particular character of resistance to environmental assaults such as incineration, immersion, trauma, mutilation and decomposition. The traditional method to extract DNA from teeth requires mechanical crush of the entire tooth. Although this is easy and reliable, it is not ideal for further evidence purpose or anthropological study. Cell-abundant areas of the tooth are pulp and cementum. Two methods of minimum destruction on tooth for pulp and cementum samplings respectively were used in this study to extract DNA for individual identification. About the pulp sampling, a dental handpiece was used to drill a hole on occlusal surface of the tooth, and then dental files were used to retrieve pulp and odontoblasts, after that the hole was filled back with composite resin. As for the cementum sampling, blades were used to scrape cementum which is on the outer surface of the root . The loss of cementum was so small that could hardly be found. Fifty-eight fallen tooth samples were buried and unburied, and 4 forensic tooth samples were tested in this study. DNA yields and STR success rates were compared with these two sampling methods. It showed that cementum sampling outperformed pulp sampling in DNA quality and efficiency. It indicated that microbes played an imperative role in degrading the nuclear material and reduced DNA yields. The success rates of STR genotyping among incisors, premolars, and molars showed multirooted teeth provided better DNA quantity and quality than single-root teeth. The DNA quantity of teeth with cavities were seriously affected in pulp samples, while the cementum was not observed in this matter. Cementum sampling is an ideal method for DNA extraction if tooth morphological preservation is the highest priority. If pathogen DNA is of interest, occlusal approach to retrieve pulp may serve as a good alternative to prepare DNA without destruction of the tooth structure.en
dc.description.provenanceSubmitted by admin ntu (admin@lib.ntu.edu.tw) on 2023-09-18T16:06:39Z
No. of bitstreams: 0
en
dc.description.provenanceMade available in DSpace on 2023-09-18T16:06:39Z (GMT). No. of bitstreams: 0en
dc.description.tableofcontents致謝 i
中文摘要 ii
ABSTRACT iii
List of Figures vii
List of Tables xi
Chapter 1 Introduction 1
Chapter 2 Literature Review 10
2.1 Pulverizing the entire tooth 10
2.2 Horizontal sectioning through the cementoenamel junction 11
2.3 Vertical split of the tooth 12
2.4 Retrograde access to pulp chamber 13
2.5 Orthograde or conventional occlusal access 14
2.6 Scraping cementum by blades 15
Chapter 3 Materials and method 17
3.1 Sample preparation 17
3.2 Pulp (including odontoblastic powder) sampling 23
3.3 Cementum sampling 29
3.4 Restore tooth morphology 30
3.5 DNA extraction, amplification and STR genotyping 31
3.6 Case study 33
Chapter 4 Results 34
Chapter 5 Discussion 70
5.1 DNA extraction 70
5.2 STR genotyping 74
5.3 Secondary samplings in cementum 84
5.4 Forensic samples 85
Chapter 6 Conclusion 86
References 87
-
dc.language.isoen-
dc.subject牙髓zh_TW
dc.subject人別鑑定zh_TW
dc.subjectSTRzh_TW
dc.subjectDNAzh_TW
dc.subject牙骨質zh_TW
dc.subject牙齒型態zh_TW
dc.subjectpulpen
dc.subjecttooth morphplogyen
dc.subjectindividual identificationen
dc.subjectcementumen
dc.subjectDNAen
dc.subjectSTRen
dc.title牙齒DNA之人別鑑定zh_TW
dc.titleIndividual Identification from Dental DNAen
dc.typeThesis-
dc.date.schoolyear111-2-
dc.description.degree碩士-
dc.contributor.oralexamcommittee蔡麗琴;林俊彥zh_TW
dc.contributor.oralexamcommitteeLi-Chin Tsai;Chun-Yen Linen
dc.subject.keyword人別鑑定,牙髓,牙骨質,DNA,STR,牙齒型態,zh_TW
dc.subject.keywordindividual identification,pulp,cementum,DNA,STR,tooth morphplogy,en
dc.relation.page94-
dc.identifier.doi10.6342/NTU202301086-
dc.rights.note同意授權(全球公開)-
dc.date.accepted2023-06-27-
dc.contributor.author-college醫學院-
dc.contributor.author-dept法醫學研究所-
顯示於系所單位:法醫學科所

文件中的檔案:
檔案 大小格式 
ntu-111-2.pdf3.91 MBAdobe PDF檢視/開啟
顯示文件簡單紀錄


系統中的文件,除了特別指名其著作權條款之外,均受到著作權保護,並且保留所有的權利。

社群連結
聯絡資訊
10617臺北市大安區羅斯福路四段1號
No.1 Sec.4, Roosevelt Rd., Taipei, Taiwan, R.O.C. 106
Tel: (02)33662353
Email: ntuetds@ntu.edu.tw
意見箱
相關連結
館藏目錄
國內圖書館整合查詢 MetaCat
臺大學術典藏 NTU Scholars
臺大圖書館數位典藏館
本站聲明
© NTU Library All Rights Reserved