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請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/56812
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dc.contributor.advisor孔繁璐(Fan-Lu Kung)
dc.contributor.authorChiao-Chen Linen
dc.contributor.author林巧澄zh_TW
dc.date.accessioned2021-06-16T05:50:02Z-
dc.date.available2019-10-20
dc.date.copyright2014-10-20
dc.date.issued2014
dc.date.submitted2014-08-08
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26. Ando, K.; Iijima, K.-i.; Elliott, J. I.; Kirino, Y.; Suzuki, T., Phosphorylation-dependent Regulation of the Interaction of Amyloid Precursor Protein with Fe65 Affects the Production of β-Amyloid. Journal of Biological Chemistry 2001, 276 (43), 40353-40361.
27. Pastorino, L.; Sun, A.; Lu, P.-J.; Zhou, X. Z.; Balastik, M.; Finn, G.; Wulf, G.; Lim, J.; Li, S.-H.; Li, X.; Xia, W.; Nicholson, L. K.; Lu, K. P., The prolyl isomerase Pin1 regulates amyloid precursor protein processing and amyloid-[beta] production. Nature 2006, 440 (7083), 528-534.
28. Sultana, R.; Perluigi, M.; Butterfield, D. A., Oxidatively modified proteins in Alzheimer’s disease (AD), mild cognitive impairment and animal models of AD: role of Abeta in pathogenesis. Acta Neuropathologica 2009, 118 (1), 131-150.
29. Markus, P. M.; Cai, X.; Ming, W.; Demetris, A. J.; Fung, J. J.; Starzl, T. E., Prevention of graft-versus-host disease following allogeneic bone marrow transplantation in rats using FK506. Transplantation 1991, 52 (4), 590-594.
30. Siekierka, J. J.; Hung, S. H. Y.; Poe, M.; Lin, C. S.; Sigal, N. H., A cytosolic binding protein for the immunosuppressant FK506 has peptidyl-prolyl isomerase activity but is distinct from cyclophilin. Nature 1989, 341 (6244), 755-757.
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32. Galat, A., A note on clustering the functionally-related paralogues and orthologues of proteins: a case of the FK506-binding proteins (FKBPs). Computational Biology and Chemistry 2004, 28 (2), 129-140.
33. Maki, N.; Sekiguchi, F.; Nishimaki, J.; Miwa, K.; Hayano, T.; Takahashi, N.; Suzuki, M., Complementary DNA encoding the human T-cell FK506-binding protein, a peptidylprolyl cis-trans isomerase distinct from cyclophilin. Proceedings of the National Academy of Sciences 1990, 87 (14), 5440-5443.
34. Cameron, A. M.; Steiner, J. P.; Sabatini, D. M.; Kaplin, A. I.; Walensky, L. D.; Snyder, S. H., Immunophilin FK506 binding protein associated with inositol 1,4,5-trisphosphate receptor modulates calcium flux. Proceedings of the National Academy of Sciences 1995, 92 (5), 1784-1788.
35. Jayaraman, T.; Brillantes, A. M.; Timerman, A. P.; Fleischer, S.; Erdjument-Bromage, H.; Tempst, P.; Marks, A. R., FK506 binding protein associated with the calcium release channel (ryanodine receptor). Journal of Biological Chemistry 1992, 267 (14), 9474-9477.
36. MacMillan, D.; Currie, S.; Bradley, K. N.; Muir, T. C.; McCarron, J. G., In smooth muscle, FK506-binding protein modulates IP3 receptor-evoked Ca2+ release by mTOR and calcineurin. Journal of Cell Science 2005, 118 (23), 5443-5451.
37. MacMillan, D., FK506 binding proteins: Cellular regulators of intracellular Ca2+ signalling. European Journal of Pharmacology 2013, 700 (1–3), 181-193.
38. Wang, T.; Donahoe, P. K.; Zervos, A. S., Specific interaction of type I receptors of the TGF-beta family with the immunophilin FKBP-12. 1994; Vol. 265, p 674-6.
39. Lopez-Ilasaca, M.; Schiene, C.; Kullertz, G.; Tradler, T.; Fischer, G.; Wetzker, R., Effects of FK506-binding Protein 12 and FK506 on Autophosphorylation of Epidermal Growth Factor Receptor. Journal of Biological Chemistry 1998, 273 (16), 9430-9434.
40. Huse, M.; Chen, Y.-G.; Massague, J.; Kuriyan, J., Crystal Structure of the Cytoplasmic Domain of the Type I TGF β Receptor in Complex with FKBP12. Cell 96 (3), 425-436.
41. DeCenzo, M. T.; Park, S. T.; Jarrett, B. P.; Aldape, R. A.; Futer, O.; Murcko, M. A.; Livingston, D. J., FK506-binding protein mutational analysis: defining the active-site residue contributions to catalysis and the stability of ligand complexes. Protein Engineering 1996, 9 (2), 173-180.
42. Ikura, T.; Ito, N., Requirements for peptidyl-prolyl isomerization activity: a comprehensive mutational analysis of the substrate-binding cavity of FK506-binding protein 12. Protein science : a publication of the Protein Society 2007, 16 (12), 2618-2625.
43. Klettner, A.; Baumgrass, R.; Zhang, Y.; Fischer, G.; Burger, E.; Herdegen, T.; Mielke, K., The neuroprotective actions of FK506 binding protein ligands: neuronal survival is triggered by de novo RNA synthesis, but is independent of inhibition of JNK and calcineurin. Molecular Brain Research 2001, 97 (1), 21-31.
44. Suen, K.-C.; Lin, K.-F.; Elyaman, W.; So, K.-F.; Chang, C.R.-C.; Hugon, J., Reduction of calcium release from the endoplasmic reticulum could only provide partial neuroprotection against beta-amyloid peptide toxicity. Journal of Neurochemistry 2003, 87 (6), 1413-1426.
45. Kato, H.; Oikawa, T.; Otsuka, K.; Takahashi, A.; Itoyama, Y., Postischemic changes in the immunophilin FKBP12 in the rat brain. Molecular Brain Research 2000, 84 (1–2), 58-66.
46. Liu, F.-L.; Liu, P.-H.; Shao, H.-W.; Kung, F.-L., The intracellular domain of amyloid precursor protein interacts with FKBP12. Biochemical and Biophysical Research Communications 2006, 350 (2), 472-477.
47. Fischer, G.; Bang, H.; Berger, E.; Schellenberger, A., Conformational specificity of chymotrypsin toward proline-containing substrates. Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology 1984, 791 (1), 87-97.
48. Rouviere, P. E.; Gross, C. A., SurA, a periplasmic protein with peptidyl-prolyl isomerase activity, participates in the assembly of outer membrane porins. Genes & Development 1996, 10 (24), 3170-3182.
49. Kofron, J. L.; Kuzmic, P.; Kishore, V.; Colon-Bonilla, E.; Rich, D. H., Determination of kinetic constants for peptidyl prolyl cis-trans isomerases by an improved spectrophotometric assay. Biochemistry 1991, 30 (25), 6127-6134.
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/56812-
dc.description.abstractAICD,又名類澱粉前驅蛋白胞內區塊 (APP intracelluar domain),是由類澱粉前驅蛋白(amyloid precursor protein,APP) 經過α-或是β-secretase,再經由γ-secretase切割後釋放到細胞質中的片段。過去的研究發現一些chaperone會與AICD產生交互作用,Pin1即是其中一個例子。Pin1為一具有PPIase活性的chaperone蛋白,曾經有研究指出Pin1可催化APP上的pT668P669間胜肽鍵構形轉換,使其構形趨向從cis form轉為trans form,進而造成Aβ減少。之前利用酵母菌雙雜交的實驗發現免疫親合素FKBP12與AICD有交互作用,FKBP12同樣也是具有PPIase活性的chaperone,當在HEK293T細胞中過度表現FKBP12時,C99與C83的比例會改變。FKBP12結構之研究中,曾指出Asp37、Phe46、Trp59和Tyr82位於FKBP12之基質結合位置。在本研究中我們利用一系列在這些位置點突變的FKBP12突變株 (FKBP12D37V、 FKBP12F46L、FKBP12W59A、FKBP12W59L、FKBP12Y82F),來觀察究竟是FKBP12與AICD間的交互作用還是FKBP12的PPIase活性,對前述APP水解途徑的改變有較大的影響。
在此我們利用bio-layer interferometry技術來觀察不同的FKBP12 與AICD間的交互作用,並用chymotrypsin coupled-assay來測試各個FKBP12的PPIase活性。實驗結果顯示,FKBP12W59A突變株改變了野生種FKBP12原本催化的淨反應方向,同時也觀察到在COS7細胞中過度表現FKBP12W59A,會使C99/C83比值較表現野生種FKBP12時為低。依據這些結果,我們認為FKBP12的PPIase活性在其對APP的水解過程之調控中扮演著較重要的角色。FKBP12可能催化APP上T668P669之間胜肽鍵的構形從trans轉為cis,進而導致Aβ增加。此結果使我們對於AICD的生理功能和FKBP12在阿茲海默氏症中所扮演的角色有了更進一步的了解。
zh_TW
dc.description.abstractAPP intracellular domain (AICD) is the cytoplasmic fragment released from amyloid precursor protein (APP) processed by α- or β, and γ-secretases. Previous studies indicated that some chaperones, such as Pin1, can interact with AICD. Pin1 is a chaperone with peptidyl-prolyl cis-trans isomerase (PPIase) activity. It was reported Pin1 can catalyze cis to trans isomerization of prolyl peptide bond in APP pT668P669, resulting in a decrease of Aβ. FKBP12, another chaperone and an immunophilin with PPIase activity, was found to interact with AICD by yeast two-hybrid screening. It has been shown that overexpression of FKBP12 altered C99/C83 ratio in HEK293T cells. Previous structure studies of FKBP12 indicate that the residues Asp37, Phe46, Trp59, Tyr82 are present in the substrate binding cavity of FKBP12. Here we generate a series of point mutations at those sites (FKBP12D37V, FKBP12F46L, FKBP12W59A, FKBP12W59L, FKBP12Y82F) to investigate whether the interaction between FKBP12 and AICD, or the PPIase activity is more important in altering APP processing.
In this study, bio-layer interferometry technology was used to analyze the binding affinity of FKBP12 (wild-type and mutants) to AICD, and the chymotrypsin coupled-assay was used to characterize the PPIase activity of various FKBP12. Our results indicate that FKBP12W59A, the mutant which changes the overall direction of the isomerization reaction catalyzed by the wild-type FKBP12, decreases C99/C83 ratio in COS7 cell line. Based on these observations, we suggest that the PPIase activity of FKBP12 plays a more important role in the regulation of APP processing. FKBP12 may catalyze trans to cis isomerization of the prolyl peptide bond in APP T668P669, resulting in an increase of Aβ level. This result allows us to have a clearer picture of the physiological and biological function of AICD and the role FKBP12 plays in the development of Alzheimer’s disease.
en
dc.description.provenanceMade available in DSpace on 2021-06-16T05:50:02Z (GMT). No. of bitstreams: 1
ntu-103-R01423018-1.pdf: 2550288 bytes, checksum: e4c0f8fe1cf02de0dc8ff0a8cbeafd72 (MD5)
Previous issue date: 2014
en
dc.description.tableofcontents目錄
口試委員會審定書 I
致謝 II
中文摘要 III
英文摘要 IV
英文縮寫表 Ⅵ
目錄 Ⅸ
序論 1
實驗目的 7
實驗材料與方法 8
實驗結果與討論 20
一、
確認FKBP12與AICD間的交互作用,並比較不同FKBP12與AICD間交互作用差異 20

二、
觀察FKBP12 wild-type與mutants的PPIase活性差異 23
三、
FKBP12 wild-type及mutants對AICD上T668P669間的異構化作用和與AICD的interaction是否會影響APP的水解過程 26

圖表 29
參考文獻 42
dc.language.isozh-TW
dc.subject阿茲海默症zh_TW
dc.subject類澱粉前驅蛋白zh_TW
dc.subjectFKBP12en
dc.subjectAICDen
dc.subjectAPP processingen
dc.title探討FKBP12與AICD間交互作用對APP代謝之影響zh_TW
dc.titleInvestigation of the Effect of FKBP12-AICD Interaction on APP Processingen
dc.typeThesis
dc.date.schoolyear102-2
dc.description.degree碩士
dc.contributor.oralexamcommittee顧記華(Jih-Hwa Guh),許麗卿(Lih-Ching Hsu)
dc.subject.keyword阿茲海默症,類澱粉前驅蛋白,zh_TW
dc.subject.keywordFKBP12,AICD,APP processing,en
dc.relation.page48
dc.rights.note有償授權
dc.date.accepted2014-08-08
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept藥學研究所zh_TW
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