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  1. NTU Theses and Dissertations Repository
  2. 生物資源暨農學院
  3. 農業化學系
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/9871
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor王一雄(Yei-Shung Wang)
dc.contributor.authorWen-Ching Chenen
dc.contributor.author陳玟瑾zh_TW
dc.date.accessioned2021-05-20T20:46:28Z-
dc.date.available2010-07-17
dc.date.available2021-05-20T20:46:28Z-
dc.date.copyright2008-07-17
dc.date.issued2008
dc.date.submitted2008-07-10
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/9871-
dc.description.abstract丁基拉草 (N-butoxymethyl-2-chloro-2’,6’-diethylacetanilide)為水田中使用廣泛的除草劑,其快速降解及低毒性的特性使其成為具環境親和性的農藥選擇。本研究探討丁基拉草施用對非培養法(Culture-independent Method)及培養法(Culture-dependent Method)所得細菌族群組成及固氮活性的影響。結果顯示,水稻成活期時,於水田上層(0-3 cm)土壤中,兩種濃度(1.5 g are-1及15 g are-1)的丁基拉草施用皆能顯著的提高土壤的固氮活性。但在水稻成熟期時,只有高濃度的丁基拉草施用可以提升土壤的固氮活性。於水田下層(3-15 cm)土壤中,兩種濃度的丁基拉草施用皆能顯著的提高土壤的固氮活性,並且於水稻成熟期時,高濃度的丁基拉草施用較低濃度丁基拉草施用更能顯著地促進土壤固氮作用。由分析變性梯度凝膠電泳圖譜(Denaturing Gradient Gel Electrophoresis,簡稱DGGE)所得之不加權平均連結法(Un-paired Group Method Using Arithmetic Averages,簡稱UPGMA)圖譜結果得知,與對照組相比,微生物族群多樣性的變化在固氮菌族群中約為33-64 %,在細菌族群中約為28-52 %。為更進一步演繹集群分析結果,採用最小距離法(Minimum Distance,簡稱MD)決定UPGMA 圖譜的分群數目,所得結果顯示,丁基拉草的施用可影響游離固氮菌及真細菌菌族群之菌相組成,且經100天的水稻種植期後,未能恢復成原有的菌相狀態。高倍丁基拉草施用下,上層土壤中的可培養性優勢固氮菌種可能為Janthinobacterium sp.,而在下層土壤中,則為Arthrobacter sp.。在第39天時,固氮菌的族群種類多樣性增加,也因此造成土壤固氮作用的提升。zh_TW
dc.description.abstractButachlor (N-butoxymethyl-2-chloro-2’,6’-diethylacetanilide), one of the widely utilized herbicides in paddy fields, characterizes by its fast degradation rate and low toxicity and serves to be a herbicide that fulfills environmental friendliness purpose. The bacterial composition under butachlor application with rice plant cultivation was investigated by culture-independent and culture-dependent method and the change of nitrogenase activities under the same treatment were also investigated. The results showed that in the upper layer of paddy soils (0-3 cm), both concentrations of butachlor application (1.5 g are-1 and 15 g are-1) could significantly raise soil nitrogenase activities at rice survival stage. But at the rice ripening stage, only higer concentration of butachlor application could raise the soil nitrogenase activity significantly. In the lower layer of paddy soils (3-15 cm), both concentrations of butachlor could raise soil nitrogenase activities, while higher concentration of butachlor could raise the activity to a larger degree. From the results of un-paired group method using arithmetic averages (UPGMA) which interpreting the results of denaturing gradient gel electrophoresis (DGGE), the diazotrophic divergences upon butachlor application were ranged from 33-64% throughout rice growth stages; while that of eubacterial diversities were from 28-52%. For further interpretation and determination of the cluster numbers of each UPGMA dendrograms, minimum distance statistics (MD), was therefore applied. The results showed that the application of butachlor altered the composition of diazotrophic and eubacterial communities without recovery to the inceptive state after 100 days of rice cultivation. The predominant nitrogen fixation bacteria was Janthinobacterium sp. under higher dose of butachlor in upper layer soil, and was Arthrobacter sp. in lower layer soil. The diazothrophic biodiversity increased after 39 days and was the reason that boosted the soil nitrogenase activity.en
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dc.description.tableofcontents目錄
摘要…………………………………………………………….................... I
ABSTRACT………………………………………………………............... II
目錄………………………………………………………………………… IV
圖目錄………………………………………………………………............ VI
表目錄………………………………………………………………............ IX
附錄目錄…………………………………………………………………… X
一、前言…………………………………………………………………… 1
二、文獻回顧……..……………………………………………………….. 4
(一)農藥使用下之環境與土壤微生物多樣性………………………… 4
1. 農藥使用………………………………………………………....... 4
2. 農藥與環境的關係………………...……………………................ 6
3. 農藥與微生物生態的關係……………………………...………… 7
4. 農藥於水田的施用……………………...………………………… 10
(二)丁基拉草之特性…..……………….………………………………. 11
1. 一般特性…………………………………...……………………… 11
2. 丁基拉草的降解與分佈情形………………...…………...………. 13
3. 丁基拉草對生態環境的影響………………….…………...……... 15
(三)稻田土壤中的固氮作用與固氮微生物……………………………. 16
1. 稻田裡的固氮作用與游離固氮菌…………………………….….. 16
2. 控制固氮作用的基因………….………………………………….. 19
3. 固氮作用與丁基拉草………………...…………………………… 22
(四)本研究相關之生物技術……………………………………………. 23
1. 聚合酶鏈鎖反應………………...………………………………… 23
2. 變性梯度凝膠電泳………………………………………………... 24
(五)電泳圖譜結果的集群分析…….……………………………………. 26
1. 集群分析…………………………………………………………... 26
2. 集群數的決定……………………………………………………... 30
三、材料與方法……………………………………………………………. 31
(一)材料………………………………………………………………… 31
(二)方法………………………………………………………………… 36
四、結果與討論…………………………………………………………… 52
(一)丁基拉草施用下土壤固氮活性的改變……………………………. 52
(二)丁基拉草施用下土壤游離固氮菌相的改變(非培養法)………. 57
(三)丁基拉草施用下土壤真細菌菌相的改變(非培養法)…………… 69
(四)以MD統計量決定UPGMA圖譜的群數........................................ 73
(五)丁基拉草施用下土壤游離固氮菌的族群變化(可培養法)…….. 76
(六)丁基拉草施用下土壤真細菌的族群變化(可培養法)................. 86
五、結論…………………………………………………………………… 93
參考文獻…………………………………………………………………… 95
附錄………………………………………………………………………… 107





圖目錄
圖1.1 台灣省水田旱田耕地面積比率圖……………………………… 3
圖2.1 除草劑丁基拉草之化學結構…………………………………… 11
圖2.2 除草劑於台中砂壤土及桃園黏壤土土壤管柱分佈之模式預測及實際量測值……………………………………………………
14
圖2.3 聚合酶鏈鎖反應示意圖………………………………………… 23
圖3.1 本研究所採用之坡堵系水田土壤……………………………… 31
圖3.2 丁基拉草之標準曲線…………………………………………… 32
圖3.3 水稻種植過程…………………………………………………… 37
圖3.4 PCR反應溫度控制圖…………………………………………… 41
圖4.1 本研究中PCR-DGGE圖譜之標準分子尺……………………... 59
圖4.2 Microbacterium sp. 之核酸定序電泳結果……………………... 60
圖4.3 Arthrobacter sp. 之核酸定序電泳結果……………………........ 61
圖4.4 Paenibacillus borealis之核酸定序電泳結果…………………… 62
圖4.5 Rhodococcus erythropolis之核酸定序電泳結果……………….. 63
圖4.6 Unidentified 菌株之核酸定序電泳結果………………..……… 64
圖4.7 於不同鎂離子濃度下,進行PCR反應擴增土壤DNA之16S rDNA片段後,以1% agarose 電泳分析之結果………………...
65
圖4.8 不同濃度丁基拉草處理下,第7、37、67及100天上層稻田土壤中之nifH 基因片段的(A)PCR-DGGE圖譜及(B)UPGMA樹狀圖………………………………………………….
66
圖4.9 不同濃度丁基拉草處理下,第7、37、67及100天下層稻田土壤中之nifH 基因片段的(A)PCR-DGGE圖譜及(B)UPGMA樹狀圖………………………………………………….

68
圖4.10 不同濃度丁基拉草處理下,第7、37、67及100天上層稻田土壤中之16S rDNA基因片段的(A)PCR-DGGE圖譜及(B)UPGMA樹狀圖………………………………………………….
71
圖4.11 不同濃度丁基拉草處理下,第7、37、67及100天上層稻田土壤中之16S rDNA基因片段的(A)PCR-DGGE圖譜及(B)UPGMA樹狀圖………………………………………………….
72
圖4.12 以MD的結果決定UPGMA分群的數目。………………………………………………………………
75
圖4.13 水稻種植第7天(A)及第39天(B)時,15 g are-1丁基拉草施用對土壤真細菌及固氮菌之菌數影響。………………….
80
圖4.14 水稻種植第7天時,由上層土壤(0-3 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之具有固氮潛力的細菌族群。………………………………………………………….
82
圖4.15 水稻種植第7天時,由下層土壤(3-15 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之具有固氮潛力的細菌族群。………………………………………………………….
83
圖4.16 水稻種植第39天時,由上層土壤(0-3 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之具有固氮潛力的細菌族群。…………………………………………………………..
84
圖4.17 水稻種植第39天時,由下層土壤(3-15 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之具有固氮潛力的細菌族群。……………………………………………………….
85
圖4.18 水稻種植第7天時,由上層土壤(0-3 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之細菌族群。……..…
89
圖4.19 水稻種植第7天時,由下層土壤(3-15 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之細菌族群。……..…
90

圖4.20 水稻種植第39天時,由上層土壤(0-3 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之細菌族群。…..…..
91
圖4.21 水稻種植第39天時,由下層土壤(3-15 cm)中分離、培養並鑑定控制組與15 g are-1丁基拉草施用下之細菌族群。……..
92







表目錄
表2.1 常用分子生物技術縮寫表……………………………………… 9
表2.2 禾本科相關之游離固氮菌種…………………………………… 18
表2.3 Azospirillum屬之固氮、氮同化及調節作用的相關基因及其對應功能……………………………………………………………
21
表2.4 常用相似度參數表……………………………………………… 27
表3.1 水稻種植及取樣時間日程表…………………………………… 38
表3.2 本研究中所使用的引子………………………………………… 40
表3.3 PCR反應試劑成分……………………………………………… 40
表3.4 本研究所使用之無氮培養基成分表…………………………… 43
表3.5 不同濃度之Acrylamide/Bis所能分離之核酸長度…………….. 45
表3.6 7% 之Acrylamide/Bis變性梯度凝膠成分……………………. 45
表3.7 10% Ammonium persufate之成分………………………………. 45
表3.8 DCode染劑之成分……………………………………………… 46
表3.9 本研究所使用之營養培養基(NB)成分表…………………… 50
表4.1 不同濃度丁基拉草處理下,上層土壤(0-3 cm)於不同水稻生長期的乙炔還原反應變化……………………………………
55
表4.2 不同濃度丁基拉草處理下,下層土壤(3-15 cm)於不同水稻生長期的乙炔還原反應變化……………………………………
56







附錄目錄
附錄A 水稻種植第7天時所篩選出具固氮潛力之可培養性菌………. 107
附錄B 水稻種植第39天時所篩選出具固氮潛力之可培養性菌……... 109
附錄C 水稻種植第7天時所篩選出之可培養性菌……………………. 111
附錄D 水稻種植第39天時所篩選出之可培養性菌…………………... 115
dc.language.isozh-TW
dc.title除草劑丁基拉草對稻田土壤微生物多樣性與固氮作用影響之研究zh_TW
dc.titleEffects of the Herbicide Butachlor on Soil Microbial community and on Nitrogen Fixing Ability in Paddy Soilen
dc.typeThesis
dc.date.schoolyear96-2
dc.description.degree博士
dc.contributor.oralexamcommittee顏瑞泓(Jui-Hung Yen),林鴻淇(Hong-Chi Lin),鍾仁賜,畢修平,劉秀美,張碧芬
dc.subject.keyword丁基拉草,變性梯度凝膠電泳,固氮活性,細菌族群多樣性,UPGMA,zh_TW
dc.subject.keywordbutachlor,DGGE,nitrogenase activity,bacterial biodiversity,UPGMA,en
dc.relation.page117
dc.rights.note同意授權(全球公開)
dc.date.accepted2008-07-10
dc.contributor.author-college生物資源暨農學院zh_TW
dc.contributor.author-dept農業化學研究所zh_TW
顯示於系所單位:農業化學系

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