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  2. 醫學院
  3. 微生物學科所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/90815
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dc.contributor.advisor鄧述諄zh_TW
dc.contributor.advisorShu-Chun Tengen
dc.contributor.author陳怡安zh_TW
dc.contributor.authorYi-An Chenen
dc.date.accessioned2023-10-03T17:44:45Z-
dc.date.available2023-11-10-
dc.date.copyright2023-10-03-
dc.date.issued2023-
dc.date.submitted2023-08-10-
dc.identifier.citationBekris, L. M., Yu, C.-E., Bird, T. D., & Tsuang, D. (2011). The genetics of Alzheimer’s disease and Parkinson’s disease. Neurochemical mechanisms in disease, 695755.
Beurel, E., Grieco, S. F., & Jope, R. S. (2015). Glycogen synthase kinase-3 (GSK3):regulation, actions, and diseases. Pharmacol Ther, 148, 114-131. doi:10.1016/j.pharmthera.2014.11.016
Blass, J. P. (2010). Neurochemical mechanisms in disease (Vol. 1): Springer.
Braithwaite, S. P., Voronkov, M., Stock, J. B., & Mouradian, M. M. (2012). Targeting phosphatases as the next generation of disease modifying therapeutics for Parkinson’s disease. Neurochemistry International, 61(6), 899-906.
Chen, Y. C., Jiang, P. H., Chen, H. M., Chen, C. H., Wang, Y. T., Chen, Y. J., . . . Teng, S. C. (2018). Glucose intake hampers PKA-regulated HSP90 chaperone activity. Elife, 7. doi:10.7554/eLife.39925
Conradi, C., & Shiu, A. (2018). Dynamics of Posttranslational Modification Systems: Recent Progress and Future Directions. Biophys J, 114(3), 507-515. doi:10.1016/j.bpj.2017.11.3787
Cuende, J., Moreno, S., Bolanos, J., & Almeida, A. (2008). Retinoic acid downregulates Rae1 leading to APCCdh1 activation and neuroblastoma SH-SY5Y differentiation. Oncogene, 27(23), 3339-3344.
Genest, O., Wickner, S., & Doyle, S. M. (2019). Hsp90 and Hsp70 chaperones: Collaborators in protein remodeling. Journal of Biological Chemistry, 294(6), 2109-2120.
Gillis, J., Schipper-Krom, S., Juenemann, K., Gruber, A., Coolen, S., van den Nieuwendijk, R., . . . Reits, E. A. (2013). The DNAJB6 and DNAJB8 protein chaperones prevent intracellular aggregation of polyglutamine peptides. J Biol
Chem, 288(24), 17225-17237. doi:10.1074/jbc.M112.421685
Goldman, S. A., & Sim, F. (2005). Neural progenitor cells of the adult brain. Paper presented at the Stem Cells: Nuclear Reprogramming and Therapeutic Applications: Novartis Foundation Symposium 265.
Hipp, M. S., Kasturi, P., & Hartl, F. U. (2019). The proteostasis network and its decline in ageing. Nature reviews Molecular cell biology, 20(7), 421-435.
Hur, E.-M., & Zhou, F.-Q. (2010). GSK3 signalling in neural development. Nature Reviews Neuroscience, 11(8), 539-551.
Janesick, A., Wu, S. C., & Blumberg, B. (2015). Retinoic acid signaling and neuronal differentiation. Cellular and Molecular Life Sciences, 72, 1559-1576.
Kaidanovich-Beilin, O., & Woodgett, J. R. (2011). GSK-3: Functional Insights from Cell Biology and Animal Models. Front Mol Neurosci, 4, 40. doi:10.3389/fnmol.2011.00040
Karamanos, T. K., Tugarinov, V., & Clore, G. M. (2019). Unraveling the structure and dynamics of the human DNAJB6b chaperone by NMR reveals insights into Hsp40-mediated proteostasis. Proc Natl Acad Sci U S A, 116(43), 21529-21538. doi:10.1073/pnas.1914999116
López-Otín, C., Blasco, M. A., Partridge, L., Serrano, M., & Kroemer, G. (2023).
Hallmarks of aging: An expanding universe. Cell. Lal, H., Ahmad, F., Woodgett, J., & Force, T. (2015). The GSK-3 family as therapeutic target for myocardial diseases. Circulation research, 116(1), 138-149.
Li, J., Qian, X., & Sha, B. (2009). Heat shock protein 40: structural studies and their functional implications. Protein and peptide letters, 16(6), 606-612.
Liu, M., Iavarone, A., & Freedman, L. P. (1996). Transcriptional activation of the human p21WAF1/CIP1 gene by retinoic acid receptor: correlation with retinoid induction of U937 cell differentiation. Journal of Biological Chemistry, 271(49), 31723-31728.
Qian, F.-Y., Guo, Y.-D., Zu, J., Zhang, J.-H., Zheng, Y.-M., Abdoulaye, I. A., . . . Zhang, Z.-J. (2021). A novel recessive mutation affecting DNAJB6a causes myofibrillar myopathy. Acta Neuropathologica Communications, 9, 1-20.
Rippin, I., Bonder, K., Joseph, S., Sarsor, A., Vaks, L., & Eldar-Finkelman, H. (2021). Inhibition of GSK-3 ameliorates the pathogenesis of Huntington's disease. Neurobiology of Disease, 154, 105336.
Terrab, L., & Wipf, P. (2020). Hsp70 and the unfolded protein response as a challenging drug target and an inspiration for probe molecule development. In (Vol. 11, pp.232-236): ACS Publications.
Thiruvalluvan, A., de Mattos, E. P., Brunsting, J. F., Bakels, R., Serlidaki, D., Barazzuol, L., . . . Cattaneo, E. (2020). DNAJB6, a key factor in neuronal sensitivity to amyloidogenesis. Molecular cell, 78(2), 346-358. e349.
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/90815-
dc.description.abstract統計已知大於九成的神經退化疾病是找不到遺傳相關變異的,這意味著大部分的病人是在環境中的受到壓力累積而在老年時期產生疾病,我們實驗室日前在酵母菌模型中發現與HSP90的共伴侶蛋白Ids2在卡路里限制的壓力下會增加其磷酸化,並喪失功能、細胞存活率顯著降低。
反觀人類中,已知伴侶蛋白HSP70參與最多重要機制,而參與其中的重要輔助型伴侶蛋白HSP40所參與的機制尚未被完全了解,實驗室在幾年前針對一系列DNAJ family蛋白和疾病蛋白進行screening,想找出與清除致病蛋白相關的輔助型伴侶蛋白,學長發現其中DNABJ6家族與阿茲海默症的致病蛋白不正常堆積有關,且先前研究也表明亨廷頓舞蹈症中的huntingtin 蛋白也與其相關。有鑑於DNAJB6b在這兩種疾病的貢獻,我想去釐清是否上頭有磷酸化能調控其活性,並想探討上游的主要激酶、壓力來源為何。
在這裡,我發現了對於DNAJB6b有重要調控作用的磷酸化位點Ser 15,並發現Ser 15受GSK3調控,我推測GSK3活化時將使Ser 15位點磷酸化增加,進而降低DNAJB6b與受質結合的能力導造成胞致病蛋白不正常堆積,本篇的發現可以了解神經退化性疾病的機轉,為治療及診斷方法提供新方向。
zh_TW
dc.description.abstractStatistics show that over 90% of neurodegenerative diseases cannot be attributed to genetic variations (Blass, 2010), this suggests that most patients develop the diseases in their later years due to accumulated stress from environmental factors. Recently, our laboratory discovered a co-chaperone protein of HSP90 in a yeast model, Ids2, which undergoes phosphorylation to lose its normal function, leading to a significant decrease in cell viability under calorie restriction.
In humans, HSP70 is the main chaperone protein in the chaperone system, which isassisted by co-chaperone protein HSP40. Several years ago, our lab conducted a screening and identified that the human DNABJ6 family is associated with an abnormal accumulation of pathogenic tau proteins in Alzheimer's disease (Appendix 2.). Moreover, a previous study also indicated its relevance to Huntington’s disease (Gillis et al., 2013; Thiruvalluvan et al., 2020).
Considering the contribution of DNAJB6b to these two diseases, I aim to investigate whether its activity can be regulated by phosphorylation and explore the main upstream kinases and related stress.
Here, I found Ser 15 phosphorylation plays an important role in DNAJB6b activity and is specifically regulated by GSK3. I speculate that activation of GSK3 increases the phosphorylation of Ser15, thereby reducing the binding capacity of DNAJB6b to its substrate, which leads to abnormal accumulation of pathogenic proteins in cells. These findings shed light on the mechanism of neurodegenerative diseases and provide new directions for treatment and diagnostic approaches. My findings also dissect the disease mechanisms and provide new directions for diagnosis and treatment.
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dc.description.tableofcontents口試委員會審定書........................................................................................................... i
致謝.................................................................................................................................. ii
中文摘要:........................................................................................................................ iii
Abstract:......................................................................................................................... iv
Introduction .....................................................................................................................1
I. Neural degenerative disease ............................................................................... 1
II. Proteostasis......................................................................................................... 2
III. DNAJB6 and HSP70 folding system .............................................................. 4
IV. GSK3.................................................................................................................. 6
Results...............................................................................................................................8
I. Dephosphomimetic mutation at Ser 15 of DNAJB6b promotes the clearance
of aggregated protein through increased binding affinity with tau protein...... 8
II. DANJB6b S15D mRNA expression level is the highest among all groups. .. 9
III. Homemade phosphor antibodies distinguish Ser15 phosphorylation on
DNAJB6b in cells.................................................................................................... 9
IV. GSK3 participates in DNAJB6b phosphorylation through serine 15........ 10
doi:10.6342/NTU202303023
V. Knockdown of GSK3 in neuroblastoma promotes the clearance function
of DNAJB6b through dephosphorylation on DNAJB6 Ser15. ..........................11
VI. ...... Without protein aggregation, phosphorylation of Ser15 on DNAJB6 is
abolished under GSK3 knockdown in the neuroblastoma. ............................ 12
Discussion .......................................................................................................................13
List of abbreviations......................................................................................................17
Materials/Methods.........................................................................................................18
Cell culture ............................................................................................................ 20
Filter Trap Assay (tau) ......................................................................................... 20
Filter Trap Assay (Htt) ......................................................................................... 21
Western blot analysis............................................................................................ 22
Co-immunoprecipitation (potential substrate (tau, Htt) and chaperone (HSP
70)) ......................................................................................................................... 22
RNA isolation ........................................................................................................ 23
RNA to cDNA........................................................................................................ 23
qPCR...................................................................................................................... 24
Self-generated phosphor-antibody...................................................................... 24
Immunofluorescence ............................................................................................ 25
Flow cytometry ..................................................................................................... 25
doi:10.6342/NTU202303023
Lenti virus knockdown......................................................................................... 26
Plasmid transfection............................................................................................. 26
E. coli recombinant protein purification ............................................................ 27
In vitro kinase assay ............................................................................................. 27
Figures and figure legends............................................................................................29
Figure 1. The strongest two phosphorylation sites on DNAJB6 recorded in
PhosphositePlus are S15 and Y53. ...................................................................... 29
Figure 2. DNAJB6b S15A mutants resolve tau protein aggregation better than
DNAJB6b WT. ...................................................................................................... 30
Figure 3. Non-phosphomimetics mutant of Ser15 on DNAJB6b enhances the
function of protein clearance. .............................................................................. 31
Figure 4. mRNA expression level of S15D is the highest among all groups. ... 33
Figure 5. GSK3 might be the potential kinase of Ser15 on DNAJB6b. ........... 34
Figure 6. GSK3 inhibitor reduces huntingtin protein aggregation through
DNAJB6b............................................................................................................... 36
Figure 7. GSK3 knockdown enhances the function of DNAJB6 to resolve
huntingtin protein aggregation............................................................................ 37
Figure 8. The overexpressed p-DNAJB6b(Ser15) signal diminishes under
GSK3 knockdown............................................................................................... 38
doi:10.6342/NTU202303023
Figure 9. GSK3 interacts with DNAJB6b. ......................................................... 40
Figure 10. It is cell confluency but not RA-induced differentiation that trigger
DANJB6b phosphorylation on Ser15.................................................................. 42
Appendix ........................................................................................................................43
Appendix 1. A screen for JDPs on tau folding in neuronal cells....................... 43
Appendix 2. DNAJB6 participates in tau folding. ............................................. 44
Appendix 3. DNAJB6b is a more significant isoform to reduce tau
aggregation............................................................................................................ 46
Appendix 4. Tau protein requires DNAJB6 and HSP70 folding system. ........ 47
Appendix 5. Non-phosphorylatable S15A mutation enhances DNAJB6b-tau
interaction. ............................................................................................................ 48
References.......................................................................................................................50
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dc.language.isoen-
dc.subject亨廷頓舞蹈症zh_TW
dc.subject伴侶蛋白zh_TW
dc.subject磷酸化zh_TW
dc.subject糖原合成酶激酶3zh_TW
dc.subject蛋白質堆積zh_TW
dc.subject神經退化性疾病zh_TW
dc.subject輔助型伴侶蛋白zh_TW
dc.subject阿茲海默症zh_TW
dc.subjectprotein aggregationen
dc.subjectAlzheimer’s diseaseen
dc.subjectneurodegenerative diseaseen
dc.subjectGSK3en
dc.subjectco-chaperoneen
dc.subjectHuntington’s diseaseen
dc.subjectchaperoneen
dc.subjectphosphorylationen
dc.titleGSK3磷酸化DNAJB6b造成阿茲海默症及亨廷頓舞蹈症中不正常蛋白質聚集zh_TW
dc.titleGSK3 activates DNAJB6b phosphorylation and induces aggregation of Alzheimer's and Huntington's related proteinsen
dc.typeThesis-
dc.date.schoolyear111-2-
dc.description.degree碩士-
dc.contributor.oralexamcommittee陳韻如;余兆松;林靜嫻zh_TW
dc.contributor.oralexamcommitteeYun-Ru Chen;Jau-Song Yu;Chin-Hsien Linen
dc.subject.keyword蛋白質堆積,伴侶蛋白,輔助型伴侶蛋白,磷酸化,亨廷頓舞蹈症,阿茲海默症,神經退化性疾病,糖原合成酶激酶3,zh_TW
dc.subject.keywordprotein aggregation,Huntington’s disease,Alzheimer’s disease,neurodegenerative disease,GSK3,co-chaperone,chaperone,phosphorylation,en
dc.relation.page53-
dc.identifier.doi10.6342/NTU202303023-
dc.rights.note同意授權(全球公開)-
dc.date.accepted2023-08-10-
dc.contributor.author-college醫學院-
dc.contributor.author-dept微生物學研究所-
dc.date.embargo-lift2028-08-01-
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