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  1. NTU Theses and Dissertations Repository
  2. 醫學院
  3. 分子醫學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/83544
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dc.contributor.advisor楊偉勛(Wei-Shiung Yang)
dc.contributor.authorMin-Hui Chien
dc.contributor.author紀敏慧zh_TW
dc.date.accessioned2023-03-19T21:10:06Z-
dc.date.copyright2022-10-05
dc.date.issued2022
dc.date.submitted2022-08-30
dc.identifier.citation1. Pratt CH, King LE Jr, Messenger AG, Christiano AM, Sundberg JP. Alopecia areata. Nat Rev Dis Primers. 2017 Mar 16;3:17011. 2. Olayinka JJT, Richmond JM. Immunopathogenesis of alopecia areata. Curr Res Immunol. 2021 Feb 6;2:7-11. 3. Rajabi F, Drake LA, Senna MM, Rezaei N. Alopecia areata: a review of disease pathogenesis. Br J Dermatol. 2018 Nov;179(5):1033-1048. 4. Strazzulla LC, Wang EHC, Avila L, Lo Sicco K, Brinster N, Christiano AM, Shapiro J. Alopecia areata: Disease characteristics, clinical evaluation, and new perspectives on pathogenesis. J Am Acad Dermatol. 2018 Jan;78(1):1-12. 5. Molina L, Donati A, Valente NS, Romiti R. Alopecia areata incognita. Clinics (Sao Paulo). 2011;66(3):513-5. 6. Fonda-Pascual P, Vano-Galvan S, Garcia-Hernandez MJ, Camacho F. Alopecia Areata Sisaipho: Clinical and Therapeutic Approach in 13 Patients in Spain. Int J Trichology. 2016 Apr-Jun;8(2):99-100. 7. Guzm?n-S?nchez DA, Villanueva-Quintero GD, Alfaro Alfaro N, McMichael A. A clinical study of alopecia areata in Mexico. Int J Dermatol. 2007 Dec;46(12):1308-10. 8. Yang S, Yang J, Liu JB, Wang HY, Yang Q, Gao M, Liang YH, Lin GS, Lin D, Hu XL, Fan L, Zhang XJ. The genetic epidemiology of alopecia areata in China. Br J Dermatol. 2004 Jul;151(1):16-23. 9. Rodriguez TA, Fernandes KE, Dresser KL, Duvic M; National Alopecia Areata Registry. Concordance rate of alopecia areata in identical twins supports both genetic and environmental factors. J Am Acad Dermatol. 2010 Mar;62(3):525-7. 10. Tan E, Tay YK, Giam YC. A clinical study of childhood alopecia areata in Singapore. Pediatr Dermatol. 2002 Jul-Aug;19(4):298-301. 11. Petukhova L, Duvic M, Hordinsky M, Norris D, Price V, Shimomura Y, Kim H, Singh P, Lee A, Chen WV, Meyer KC, Paus R, Jahoda CA, Amos CI, Gregersen PK, Christiano AM. Genome-wide association study in alopecia areata implicates both innate and adaptive immunity. Nature. 2010 Jul 1;466(7302):113-7. 12. Chen PL, Fann CS, Chu CC, Chang CC, Chang SW, Hsieh HY, Lin M, Yang WS, Chang TC. Comprehensive genotyping in two homogeneous Graves' disease samples reveals major and novel HLA association alleles. PLoS One. 2011 Jan 28;6(1):e16635. 13. 賴勝凱。「應用次世代定序技術鑑定人類白血球表面抗原基因型」。碩士論文,國立臺灣大學分子醫學研究所,2018。https://hdl.handle.net/11296/q548hs。 14. Profiling Germline Adaptive Immune Receptor Repertoire with gAIRR Suite. Mao-Jan Lin, Yu-Chun Lin, Nae-Chyun Chen, Allen Chilun Luo, ShengKai Lai, Chia-Lang Hsu, Jacob Shujui Hsu, Chien-Yu Chen, WeiShiung Yang, Pei-Lung Chen bioRxiv 2020.11.27.399857. 15. Haida Y, Ikeda S, Takagi A, Komiyama E, Mabuchi T, Ozawa A, Kulski JK, Inoko H, Oka A. Association analysis of the HLA-C gene in Japanese alopecia areata. Immunogenetics. 2013 Jul;65(7):553-7. 16. Barahmani N, de Andrade M, Slusser JP, Wei Q, Hordinsky M, Price VH, Christiano A, Norris D, Reveille J, Duvic M. Human leukocyte antigen class II alleles are associated with risk of alopecia areata. J Invest Dermatol. 2008 Jan;128(1):240-3. 17. Furukawa H, Oka S, Shimada K, Hashimoto A, Komiya A, Tsunoda S, Suda A, Ito S, Saisho K, Katayama M, Shinohara S, Sato T, Nagatani K, Minota S, Matsui T, Fukui N, Sugii S, Sano H, Migita K, Nagaoka S, Tohma S. Independent association of HLA DPB1*02:01 with rheumatoid arthritis in Japanese populations. PLoS One. 2018 Sep 20;13(9):e0204459. 18. Shin DH, Baek IC, Kim HJ, Choi EJ, Ahn M, Jung MH, Suh BK, Cho WK, Kim TG. HLA alleles, especially amino-acid signatures of HLA-DPB1, might contribute to the molecular pathogenesis of early-onset autoimmune thyroid disease. PLoS One. 2019 May 15;14(5):e0216941. 19. Kular L, Liu Y, Ruhrmann S, Zheleznyakova G, Marabita F, Gomez-Cabrero D, James T, Ewing E, Lind?n M, G?rnikiewicz B, Aeinehband S, Stridh P, Link J, Andlauer TFM, Gasperi C, Wiendl H, Zipp F, Gold R, Tackenberg B, Weber F, Hemmer B, Strauch K, Heilmann-Heimbach S, Rawal R, Schminke U, Schmidt CO, Kacprowski T, Franke A, Laudes M, Dilthey AT, Celius EG, S?ndergaard HB, Tegn?r J, Harbo HF, Oturai AB, Olafsson S, Eggertsson HP, Halldorsson BV, Hjaltason H, Olafsson E, Jonsdottir I, Stefansson K, Olsson T, Piehl F, Ekstr?m TJ, Kockum I, Feinberg AP, Jagodic M. DNA methylation as a mediator of HLADRB1*15:01 and a protective variant in multiple sclerosis. Nat Commun. 2018 Jun 19;9(1):2397.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/83544-
dc.description.abstract圓禿落髮(Alopecia areata)是一種無疤痕的落髮疾病,是落髮的最常見原因之一。圓禿具有不可預測的病程和廣泛的臨床表現。不論男女性別都可能會有圓禿落髮發生,一般族群中約有2%的人口比例終其一生會受到圓禿落髮影響。圓禿疾病通常透過臨床上患處皮膚的特徵性『驚嘆號頭髮』來診斷,皮膚切片下的病理表現可在毛囊周邊發現淋巴球細胞浸潤的情形。 根據過去的觀察和研究,圓禿落髮目前被認為是一種複雜、多基因,並且與免疫相關的疾病。過去全基因組關聯分析(Genome-wide association study,GWAS)發現在圓禿落髮中涉及許多免疫和非免疫的相關基因,同時透過免疫螢光染色證實圓禿病灶處CD8+ NKG2D+ T淋巴球參與圓禿落髮的致病機轉。除遺傳因素外,研究發現圓禿疾病的發生和免疫豁免機制的崩損(Immune privilege collapse)息息相關,當頭皮的免疫豁免機制崩損時,體內IFN-r濃度增加,進一步活化頭皮細胞和 CD8+ T淋巴球、CD4+ T淋巴球及Natural killer細胞的作用,而導致落髮。 此次研究主題為研究臺灣圓禿落髮患者是否有異於過往已知圓禿疾病相關的免疫HLA基因,以及圓禿落髮在後天免疫受體庫(germline adaptive immune receptor repertoire,gAIRR)的基因表現。實驗中同時利用探針捕獲次世代定序技術(Capture-based Next-generation Sequencing)分析 DNA中的HLA基因型,以及利用gAIRR Suite探測後天免疫受體庫,包括: T cell receptor和B cell receptor(即Immunoglobulin)在DNA層級上的基因表現。最後分析結果有顯著差異的TCR及IG基因型有TRBJ2-4*01/2-5*01/2-6*01,為保護性基因。為了驗證分析結果,未來需要進一步利用Sanger sequencing及增加受試者人數來確認。zh_TW
dc.description.abstractAlopecia area (AA), a nonscarring hair loss disorder, is one of the most common causes of hair loss. AA has an unpredictable course and a wide spectrum of clinical manifestations including patchy AA, alopecia totalis, alopecia universalis, alopecia incognita, ophiasis, sisapho and Marie Antoinette syndrome. AA affects both genders equally and nearly 2% of the general population at some point during their lifetime. AA is usually diagnosed clinically by the characteristic “exclamation mark hair” on the affected skin. Histopathological studies may be required in some cases in which the lesions reveal peribulbar lymphocytic infiltration. According to the recent observations and research, AA is now firmly established as a complex, polygenic, immune-mediated disease. Previous genome-wide association studies (GWAS) have implicated numbers of immune and non-immune loci in the etiology of AA, and the further immunofluorescence stains have showed the critical role of CD8+ NKG2D+ T cells in the pathogenesis of AA. Besides genetic factors, the breakdown of immune privilege in AA also has the great impact on the pathophysiology of AA. In our study, we used the capture-based next-generation sequencing to identify the HLA of alopecia area, and the gAIRR suite to establish the database of the germline adaptive immune receptor repertoires (gAIRR) of alopecia areata. TRBJ2-4*01/ 2-5*01/ 2-6*01 are found to be the significant and protective alleles in this study. In the future, Sanger sequencing and recruiting more subjects will be needed to confirm and replicate the results.en
dc.description.provenanceMade available in DSpace on 2023-03-19T21:10:06Z (GMT). No. of bitstreams: 1
U0001-2908202200094100.pdf: 7628759 bytes, checksum: fea1372970d587c2c6e8e331ae5737cf (MD5)
Previous issue date: 2022
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dc.description.tableofcontents口試委員會審定書 -- i 謝辭 -- ii 中文摘要 -- iii 英文摘要 -- iv 第一章 緒論 1.1 毛髮週期(Hair cycle)-- 01 1.2 圓禿落髮疾病(Alopecia areata)簡介 1.2.1 圓禿落髮的流行病學 -- 02 1.2.2 圓禿落髮的臨床表現 -- 03 1.2.3 圓禿落髮的診斷 -- 04 1.3 圓禿落髮致病機轉 1.3.1 基因相關 -- 06 1.3.2 免疫系統相關 -- 06 1.3.3 其他相關因子 -- 07 1.4 研究動機 -- 08 第二章 研究方法與材料 2.1 受試者選取 -- 09 2.2 基因分型與研究方法 2.2.1 HLA 基因分型與研究方法 -- 10 2.2.2 Germline AIRR 基因分型與研究方法 -- 11 2.3 分析方法 2.3.1 HLA 基因型分析 -- 15 2.3.2 Germline AIRR 基因型分析 -- 15 第三章 結果 3.1 HLA 基因型分析結果 -- 17 3.2 Germline AIRR 基因型分析結果 -- 26 第四章 討論與未來展望 4.1 HLA 基因型分析 -- 32 4.2 Germline 基因型分析 -- 33 參考文獻 -- 34 附錄 -- 37
dc.language.isozh-TW
dc.subject後天免疫受體庫zh_TW
dc.subjectHLA基因zh_TW
dc.subject圓禿zh_TW
dc.subjectgermline adaptive immune receptor repertoiresen
dc.subjectalopecia areataen
dc.subjectHLAen
dc.title圓禿疾病之基因分析zh_TW
dc.titleGenetic Analysis of Alopecia Areataen
dc.typeThesis
dc.date.schoolyear110-2
dc.description.degree碩士
dc.contributor.coadvisor陳沛隆(Pei-Lung Chen)
dc.contributor.oralexamcommittee鐘文宏(Wen-Hung Chung)
dc.subject.keyword圓禿,HLA基因,後天免疫受體庫,zh_TW
dc.subject.keywordalopecia areata,HLA,germline adaptive immune receptor repertoires,en
dc.relation.page70
dc.identifier.doi10.6342/NTU202202902
dc.rights.note未授權
dc.date.accepted2022-08-31
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept分子醫學研究所zh_TW
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