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  1. NTU Theses and Dissertations Repository
  2. 醫學院
  3. 分子醫學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/82637
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dc.contributor.advisor李妮鍾(Ni-Chung Lee)
dc.contributor.authorChao-Fan Liuen
dc.contributor.author劉超凡zh_TW
dc.date.accessioned2022-11-25T07:48:20Z-
dc.date.available2024-10-31
dc.date.copyright2021-11-08
dc.date.issued2021
dc.date.submitted2021-10-21
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(2010). 'Recurrent microdeletions at 15q11. 2 and 16p13. 11 predispose to idiopathic generalized epilepsies.' Brain 133(1): 23-32. De Vries, B. B., et al. (2005). 'Diagnostic genome profiling in mental retardation.' The American Journal of Human Genetics 77(4): 606-616. Dupont, C., et al. (2015). 'Prenatal diagnosis of 24 cases of microduplication 22q11. 2: an investigation of phenotype‐genotype correlations.' Prenatal diagnosis 35(1): 35-43. Fiegler, H., et al. (2007). 'Construction and use of spotted large-insert clone DNA microarrays for the detection of genomic copy number changes.' Nature protocols 2(3): 577-587. Forrester, M. B. and R. D. Merz (2003). 'Pregnancy outcome and prenatal diagnosis of sex chromosome abnormalities in Hawaii, 1986–1999.' American Journal of Medical Genetics Part A 119(3): 305-310. Frezzo, T. M., et al. (2003). 'The genetic family history as a risk assessment tool in internal medicine.' Genetics in Medicine 5(2): 84-91. Garne, E., et al. (2010). 'Congenital hydrocephalus–prevalence, prenatal diagnosis and outcome of pregnancy in four European regions.' european journal of paediatric neurology 14(2): 150-155. Garne, E., et al. (2005). 'Prenatal diagnosis of severe structural congenital malformations in Europe.' Ultrasound in Obstetrics and Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 25(1): 6-11. Gil, M., et al. (2015). 'Analysis of cell‐free DNA in maternal blood in screening for fetal aneuploidies: updated meta‐analysis.' Ultrasound in obstetrics gynecology 45(3): 249-266. Gunn, S. R., et al. (2008). 'Whole-genome scanning by array comparative genomic hybridization as a clinical tool for risk assessment in chronic lymphocytic leukemia.' The Journal of molecular diagnostics 10(5): 442-451. Hoppman‐Chaney, N., et al. (2013). 'Identification of single gene deletions at 15q13. 3: further evidence that CHRNA7 causes the 15q13. 3 microdeletion syndrome phenotype.' Clinical genetics 83(4): 345-351. Jou, H. J., et al. (2005). 'The evolving national birth prevalence of Down syndrome in Taiwan. A study on the impact of second‐trimester maternal serum screening.' Prenatal diagnosis 25(8): 665-670. Kitsiou-Tzeli, S., et al. (2004). 'Detection of 22q11. 2 deletion among 139 patients with Di George/Velocardiofacial syndrome features.' in vivo 18(5): 603-608. Kochanek, K. D., et al. (2012). 'Annual summary of vital statistics: 2009.' Pediatrics 129(2): 338-348. Lee, C. N., et al. (2012). 'Clinical utility of array comparative genomic hybridisation for prenatal diagnosis: a cohort study of 3171 pregnancies.' BJOG: An International Journal of Obstetrics Gynaecology 119(5): 614-625. Li, S., et al. (2019). 'Prenatal diagnosis of microdeletions or microduplications in the proximal, central, and distal regions of chromosome 22q11. 2: ultrasound findings and pregnancy outcome.' Frontiers in genetics 10: 813. Liao, C., et al. (2014). 'Prenatal diagnosis of congenital heart defect by genome‐wide high‐resolution SNP array.' Prenatal diagnosis 34(9): 858-863. Lo, K. K., et al. (2016). 'Limited clinical utility of non-invasive prenatal testing for subchromosomal abnormalities.' The American Journal of Human Genetics 98(1): 34-44. Ma, N., et al. (2021). 'Integrated CNV-seq, karyotyping and SNP-array analyses for effective prenatal diagnosis of chromosomal mosaicism.' BMC medical genomics 14(1): 1-12. Medicine, S. f. M.-F. (2016). 'Committee Opinion No. 682: Microarrays and next-generation sequencing technology: the use of advanced genetic diagnostic tools in obstetrics and gynecology.' Obstetrics and gynecology 128(6): e262-e268. Miller, D. T., et al. (2010). 'Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.' The American Journal of Human Genetics 86(5): 749-764. Nussbaum, R. L., et al. (2015). Thompson Thompson genetics in medicine e-book, Elsevier Health Sciences. Obstetricians, A. C. o. and Gynecologists (2016). 'Practice bulletin no. 163: screening for fetal aneuploidy.' Obstet Gynecol 127(5): e123-137. Park, S.-J., et al. (2011). 'Clinical implementation of whole-genome array CGH as a first-tier test in 5080 pre and postnatal cases.' Molecular cytogenetics 4(1): 1-10. Pinkel, D., et al. (1998). 'High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays.' Nature genetics 20(2): 207-211. Prasad, A., et al. (2018). 'Clinical utility of exome sequencing in individuals with large homozygous regions detected by chromosomal microarray analysis.' BMC medical genetics 19(1): 1-11. Quadrelli, R., et al. (2007). 'Parental decisions to abort or continue a pregnancy following prenatal diagnosis of chromosomal abnormalities in a setting where termination of pregnancy is not legally available.' Prenatal Diagnosis: Published in Affiliation With the International Society for Prenatal Diagnosis 27(3): 228-232. Richardson, A. and K. E. Ormond (2018). Ethical considerations in prenatal testing: genomic testing and medical uncertainty. Seminars in Fetal and Neonatal Medicine, Elsevier. Sagi-Dain, L., et al. (2018). 'Chromosomal microarray analysis results from pregnancies with various ultrasonographic anomalies.' Obstetrics Gynecology 132(6): 1368-1375. Schluth-Bolard, C., et al. (2013). 'Breakpoint mapping by next generation sequencing reveals causative gene disruption in patients carrying apparently balanced chromosome rearrangements with intellectual deficiency and/or congenital malformations.' Journal of medical genetics 50(3): 144-150. Shaffer, B. L., et al. (2006). 'Variation in the decision to terminate pregnancy in the setting of fetal aneuploidy.' Prenatal Diagnosis: Published in Affiliation With the International Society for Prenatal Diagnosis 26(8): 667-671. Shaffer, L. G. (2005). 'American College of Medical Genetics guideline on the cytogenetic evaluation of the individual with developmental delay or mental retardation.' Genetics in Medicine 7(9): 650-654. Shaffer, L. G., et al. (2007). 'Microarray analysis for constitutional cytogenetic abnormalities.' Genetics in Medicine 9(9): 654-662. Shaffer, L. G. and B. A. Bejjani (2004). 'A cytogeneticist’s perspective on genomic microarrays.' Human reproduction update 10(3): 221-226. Shaffer, L. G., et al. (2012). 'Detection rates of clinically significant genomic alterations by microarray analysis for specific anomalies detected by ultrasound.' Prenatal diagnosis 32(10): 986-995. So, P. L., et al. (2017). 'Parental decisions following prenatal diagnosis of sex chromosome aneuploidy in Hong Kong.' Journal of Obstetrics and Gynaecology Research 43(12): 1821-1829. Stankiewicz, P. and A. L. Beaudet (2007). 'Use of array CGH in the evaluation of dysmorphology, malformations, developmental delay, and idiopathic mental retardation.' Current opinion in genetics development 17(3): 182-192. Steele, M. and W. R. Breg Jr (1966). 'Chromosome analysis of human amniotic-fluid cells.' The Lancet 287(7434): 383-385. Suzumori, N., et al. (2015). 'Parental decisions following prenatal diagnosis of chromosomal abnormalities: implications for genetic counseling practice in Japan.' Journal of genetic counseling 24(1): 117-121. Vanlerberghe, C., et al. (2015). '15q11. 2 microdeletion (BP1–BP2) and developmental delay, behaviour issues, epilepsy and congenital heart disease: A series of 52 patients.' European journal of medical genetics 58(3): 140-147. Verhoef, T. I., et al. (2016). 'Non‐invasive prenatal diagnosis (NIPD) for single gene disorders: cost analysis of NIPD and invasive testing pathways.' Prenatal diagnosis 36(7): 636-642. Wan, J., et al. (2018). 'Pregnancy outcome of autosomal aneuploidies other than common trisomies detected by noninvasive prenatal testing in routine clinical practice.' Prenatal diagnosis 38(11): 849-857. Wapner, R. J., et al. (2012). 'Chromosomal microarray versus karyotyping for prenatal diagnosis.' New England Journal of Medicine 367(23): 2175-2184. Weise, A., et al. (2012). 'Microdeletion and microduplication syndromes.' Journal of Histochemistry Cytochemistry 60(5): 346-358. Xiang, J., et al. (2020). 'Clinical utility of SNP array analysis in prenatal diagnosis: a cohort study of 5000 pregnancies.' Frontiers in genetics 11: 1401. Xie, C. and M. T. Tammi (2009). 'CNV-seq, a new method to detect copy number variation using high-throughput sequencing.' BMC bioinformatics 10(1): 1-9. Xu, Y., et al. (2019). 'Screening, prenatal diagnosis, and prenatal decision for sex chromosome aneuploidy.' Expert review of molecular diagnostics 19(6): 537-542. Zarrei, M., et al. (2015). 'A copy number variation map of the human genome.' Nature reviews genetics 16(3): 172-183.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/82637-
dc.description.abstract造成胎兒異常的因素很多,染色體不平衡分配、拷貝數變異與單基因疾病約佔整體異常的45~55%,因此產前檢測被認為是避免生產先天異常胎兒的重要方式之一。本研究蒐集2015-2020年於國立臺灣大學附設醫院進行產前單核苷酸多型性晶片篩檢的陽性個案共95例與留存結果,並比對遺傳來源與留存率的影響。結果顯示在單一染色體多倍體異常的陽性個案留存率為17.4%,留存者皆為性染色體異常的胎兒;至於在微片段缺失留存率為63.64%,異常源自遺傳及自發性突變的留存率各為89.47%與36.36%;而微片段擴增留存率為82.35%,異常源自遺傳及自發性突變的留存率則各為90.91%與60.00%,本研究證實相比於自發性突變,父母更傾向留存異常遺傳自雙親的胎兒。而蒐集到的95例陽性個案中以22號染色體q11.21位點變異最為常見,含7例微片段缺失與4例微片段擴增,本文數據也呈現缺失與擴增片段大小對於活產胎兒的週數與出生體重尚無相關。zh_TW
dc.description.provenanceMade available in DSpace on 2022-11-25T07:48:20Z (GMT). No. of bitstreams: 1
U0001-2110202101302800.pdf: 3249246 bytes, checksum: 19ba69aa93a567dfcf060d4db8ee01b4 (MD5)
Previous issue date: 2021
en
dc.description.tableofcontents口試委員審定書………………………………………………………….i 誌謝………………………………………………………………………ii 中文摘要………………………………………………………………...iii 英文摘要………………………………………………………………...iv 第一章 研究背景與動機..……………………………………………..01 1.1 產前檢測的歷史演變…………………………………….01 1.2 目前產前檢測目標、方式及種類……………………….01 1.3 拷貝數變異………………………………...……………..02 1.3.1 染色體核型分析……………………………………..…02 1.3.2 染色體晶片……………………………………………..04 1.3.3 染色體晶片與染色體核型比較………………………..05 1.3.4 次世代定序於拷貝數變異偵測的發展…………..……06 1.4 現今對產前檢測異常胎兒去留的文獻回顧…………….07 1.5 研究目的………………………………………………….09 第二章 研究方法……………………………………………………....10 2.1 檢體來源…………………………………………..……...10 2.2 羊水DNA萃取…………………………………………...10 2.3 SNP晶片試驗…………………………………………….11 2.4 Chromosome Analysis Suite分析………………………...25 2.5 晶片檢測後追蹤…………………………………………..28 2.6 資料統計…………………………………………………..28 第三章 結果…………………………………………………………....29 3.1 2015-2020臺大醫院產前晶片結果…………..…………..29 3.2 產前晶片異常案例適應症分布…………………….……30 3.3 產前晶片異常類型……………………………………….31 3.4 單一染色體多倍體/單倍體異常案例、複檢與留存結…32 3.5 微片段缺失異常案例、複檢與留存結果……………….33 3.6 微片段擴增異常案例、複檢與留存結果……………….34 3.7 常見異常微片段遺傳來源與胎兒留存率……………….36 3.8 常見異常微片段留存胎兒之出生體重、生產週數與產前 適應症……………………………………………………..37 3.9 缺失/擴增片段大小對於留存胎兒之出生體重與生產週數 影響………………………………………………………..37 第四章 討論…………………………………………………………....39 4.1 產前晶片之陽性檢測率、孕婦年齡與胎兒性別……….40 4.2 產前晶片異常類別與留存結果………………………….41 4.3 性染色體變異留存探討………………………………….42 4.4 體染色體變異留存探討………………………………….42 4.5 微片段變異與遺傳性留存探討………………………….44 4.6 常見微片段變異與超音波檢測之留存關聯………….....45 4.7 微片段變異遺傳來源探討……………………………….47 4.8 晶片平台限制………...…………………………………..48 4.9 未來展望………………………………………………….49 4.10 結論…………………………..………………………….50 第五章 參考文獻……………………………………………………....51 第六章 圖表…………………………………………………………....57
dc.language.isozh-TW
dc.subject微片段缺失zh_TW
dc.subject單核苷酸多型性晶片zh_TW
dc.subject微片段擴增zh_TW
dc.subject留存率zh_TW
dc.subjectSingle-nucleotide polymorphism arrayen
dc.subjectmicroduplicationen
dc.subjectmicrodeletionen
dc.subjectCNVen
dc.subjectretention rateen
dc.title產前晶片篩檢陽性個案之胎兒留存探討zh_TW
dc.titleDiscussion the fetal retention of positive case by prenatal array screeningen
dc.date.schoolyear109-2
dc.description.degree碩士
dc.contributor.oralexamcommittee胡務亮(Hsin-Tsai Liu),林芯伃(Chih-Yang Tseng)
dc.subject.keyword單核苷酸多型性晶片,留存率,微片段缺失,微片段擴增,zh_TW
dc.subject.keywordCNV,Single-nucleotide polymorphism array,retention rate,microdeletion,microduplication,en
dc.relation.page87
dc.identifier.doi10.6342/NTU202103952
dc.rights.note同意授權(限校園內公開)
dc.date.accepted2021-10-22
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept分子醫學研究所zh_TW
dc.date.embargo-lift2024-10-31-
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