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  1. NTU Theses and Dissertations Repository
  2. 生命科學院
  3. 生化科技學系
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/78436
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor張世宗
dc.contributor.authorYu-Fan Tuen
dc.contributor.author杜毓凡zh_TW
dc.date.accessioned2021-07-11T14:56:55Z-
dc.date.available2025-02-21
dc.date.copyright2020-02-21
dc.date.issued2020
dc.date.submitted2020-02-14
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12. Raj, V.S., Osterhaus, A.D., Fouchier, R.A., and Haagmans, B.L. (2014). MERS: emergence of a novel human coronavirus. Curr Opin Virol 5, 58-62.
13. Durai, P., Batool, M., Shah, M., and Choi, S. (2015). Middle East respiratory syndrome coronavirus: transmission, virology and therapeutic targeting to aid in outbreak control. Exp Mol Med 47, e181.
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16. Surya, W., Li, Y., Verdia-Baguena, C., Aguilella, V.M., and Torres, J. (2015). MERS coronavirus envelope protein has a single transmembrane domain that forms pentameric ion channels. Virus Res 201, 61-66.
17. Liu, J., Sun, Y., Qi, J., Chu, F., Wu, H., Gao, F., Li, T., Yan, J., and Gao, G.F. (2010). The membrane protein of severe acute respiratory syndrome coronavirus acts as a dominant immunogen revealed by a clustering region of novel functionally and structurally defined cytotoxic T-lymphocyte epitopes. J Infect Dis 202, 1171-1180.
18. de Haan, C.A., and Rottier, P.J. (2005). Molecular interactions in the assembly of coronaviruses. Adv Virus Res 64, 165-230.
19. Lin, S.C., Ho, C.T., Chuo, W.H., Li, S., Wang, T.T., and Lin, C.C. (2017). Effective inhibition of MERS-CoV infection by resveratrol. BMC Infect Dis 17, 144.
20. Lu, G., Hu, Y., Wang, Q., Qi, J., Gao, F., Li, Y., Zhang, Y., Zhang, W., Yuan, Y., Bao, J., et al. (2013). Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26. Nature 500, 227-231.
21. Wang, N., Shi, X., Jiang, L., Zhang, S., Wang, D., Tong, P., Guo, D., Fu, L., Cui, Y., Liu, X., et al. (2013). Structure of MERS-CoV spike receptor-binding domain complexed with human receptor DPP4. Cell Res 23, 986-993.
22. Chen, Y., Rajashankar, K.R., Yang, Y., Agnihothram, S.S., Liu, C., Lin, Y.L., Baric, R.S., and Li, F. (2013). Crystal structure of the receptor-binding domain from newly emerged Middle East respiratory syndrome coronavirus. J Virol 87, 10777-10783.
23. Gao, J., Lu, G., Qi, J., Li, Y., Wu, Y., Deng, Y., Geng, H., Li, H., Wang, Q., Xiao, H., et al. (2013). Structure of the fusion core and inhibition of fusion by a heptad repeat peptide derived from the S protein of Middle East respiratory syndrome coronavirus. J Virol 87, 13134-13140.
24. Lu, L., Liu, Q., Zhu, Y., Chan, K.H., Qin, L., Li, Y., Wang, Q., Chan, J.F., Du, L., Yu, F., et al. (2014). Structure-based discovery of Middle East respiratory syndrome coronavirus fusion inhibitor. Nat Commun 5, 3067.
25. Raj, V.S., Mou, H., Smits, S.L., Dekkers, D.H., Muller, M.A., Dijkman, R., Muth, D., Demmers, J.A., Zaki, A., Fouchier, R.A., et al. (2013). Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC. Nature 495, 251-254.
26. Liu, S., Xiao, G., Chen, Y., He, Y., Niu, J., Escalante, C.R., Xiong, H., Farmar, J., Debnath, A.K., Tien, P., et al. (2004). Interaction between heptad repeat 1 and 2 regions in spike protein of SARS-associated coronavirus: implications for virus fusogenic mechanism and identification of fusion inhibitors. Lancet 363, 938-947.
27. Wang, L., Shi, W., Chappell, J.D., Joyce, M.G., Zhang, Y., Kanekiyo, M., Becker, M.M., van Doremalen, N., Fischer, R., Wang, N., et al. (2018). Importance of Neutralizing Monoclonal Antibodies Targeting Multiple Antigenic Sites on the Middle East Respiratory Syndrome Coronavirus Spike Glycoprotein To Avoid Neutralization Escape. J Virol 92.
28. Corti, D., Zhao, J., Pedotti, M., Simonelli, L., Agnihothram, S., Fett, C., Fernandez-Rodriguez, B., Foglierini, M., Agatic, G., Vanzetta, F., et al. (2015). Prophylactic and postexposure efficacy of a potent human monoclonal antibody against MERS coronavirus. Proc Natl Acad Sci U S A 112, 10473-10478.
29. Niu, P., Zhao, G., Deng, Y., Sun, S., Wang, W., Zhou, Y., and Tan, W. (2018). A novel human mAb (MERS-GD27) provides prophylactic and postexposure efficacy in MERS-CoV susceptible mice. Sci China Life Sci 61, 1280-1282.
30. Niu, P., Zhang, S., Zhou, P., Huang, B., Deng, Y., Qin, K., Wang, P., Wang, W., Wang, X., Zhou, J., et al. (2018). Ultrapotent Human Neutralizing Antibody Repertoires Against Middle East Respiratory Syndrome Coronavirus From a Recovered Patient. J Infect Dis 218, 1249-1260.
31. Chen, Z., Bao, L., Chen, C., Zou, T., Xue, Y., Li, F., Lv, Q., Gu, S., Gao, X., Cui, S., et al. (2017). Human Neutralizing Monoclonal Antibody Inhibition of Middle East Respiratory Syndrome Coronavirus Replication in the Common Marmoset. J Infect Dis 215, 1807-1815.
32. Feikin, D.R., Alraddadi, B., Qutub, M., Shabouni, O., Curns, A., Oboho, I.K., Tomczyk, S.M., Wolff, B., Watson, J.T., and Madani, T.A. (2015). Association of Higher MERS-CoV Virus Load with Severe Disease and Death, Saudi Arabia, 2014. Emerg Infect Dis 21, 2029-2035.
33. Song, D., Ha, G., Serhan, W., Eltahir, Y., Yusof, M., Hashem, F., Elsayed, E., Marzoug, B., Abdelazim, A., and Al Muhairi, S. (2015). Development and validation of a rapid immunochromatographic assay for detection of Middle East respiratory syndrome coronavirus antigen in dromedary camels. J Clin Microbiol 53, 1178-1182.
34. Du, L., Zhao, G., Kou, Z., Ma, C., Sun, S., Poon, V.K., Lu, L., Wang, L., Debnath, A.K., Zheng, B.J., et al. (2013). Identification of a receptor-binding domain in the S protein of the novel human coronavirus Middle East respiratory syndrome coronavirus as an essential target for vaccine development. J Virol 87, 9939-9942.
35. Mou, H., Raj, V.S., van Kuppeveld, F.J., Rottier, P.J., Haagmans, B.L., and Bosch, B.J. (2013). The receptor binding domain of the new Middle East respiratory syndrome coronavirus maps to a 231-residue region in the spike protein that efficiently elicits neutralizing antibodies. J Virol 87, 9379-9383.
36. Tan, A.-J. (2018). Protien Exprssion and Isolation of the MERS-CoV Spike Protein, Membrane Protein and Envelope Protein. In Department of Biochemical Science and Technology, College of Life Science. (National Taiwan University).
37. Li, C.-C. (2016). Development of neutralizing antibodies against the membrane glycoproteins for emerging disease viruses. In Department of Biochemical Science and Technology, College of Life Science, Volume Master. (National Taiwan University).
38. O’Reilly, D.R. (1997). Use of Baculovirus Expression Vectors. In Recombinant Gene Expression Protocols, R.S. Tuan, ed. (Totowa, NJ: Humana Press), pp. 235-246.
39. Tan, B.H., Brown, G., and Sugrue, R.J. (2007). Secretion of the respiratory syncytial virus fusion protein from insect cells using the baculovirus expression system. Methods Mol Biol 379, 149-161.
40. Rosano, G.L., and Ceccarelli, E.A. (2014). Recombinant protein expression in Escherichia coli: advances and challenges. Front Microbiol 5, 172.
41. Tomita, M., and Tsumoto, K. (2011). Hybridoma technologies for antibody production. Immunotherapy 3, 371-380.
42. Yuan, Y., Cao, D., Zhang, Y., Ma, J., Qi, J., Wang, Q., Lu, G., Wu, Y., Yan, J., Shi, Y., et al. (2017). Cryo-EM structures of MERS-CoV and SARS-CoV spike glycoproteins reveal the dynamic receptor binding domains. Nat Commun 8, 15092.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/78436-
dc.description.abstract2012年,在沙烏地阿拉伯通報了首例新型中東呼吸症候群冠狀病毒 (MERS-CoV) 感染人的病例,並開始在全球散播。MERS-CoV的致死率高達36%,高於曾經在2002年造成全球性傳染的SARS-CoV的9%致死率。因此,為了預防疫情發生,開發出有效的診斷方法和治療藥物為當務之急。MERS-CoV棘蛋白 (Spike protein) 是病毒表面的重要抗原,棘蛋白根據其不同的功能被分S1和S2兩段次單元,其S1含有一段受體結合域 (receptor binding domain, RBD),可介導病毒與宿主細胞的DPP4 (dipeptidyl peptidase receptor 4) 表面受體結合。本論文成功開發出可結合於MERS-CoV Spike RBD之C端的兩株單株抗體A8和G2,經比較之後發現與實驗室已開發的可結合在RBD 之N端的單株抗體 6-9具有不同之抗原決定基 (epitope)。單株抗體型別鑑定結果顯示A8、G2和6-9 皆屬於IgG1並帶有kappa 輕鏈。Sandwich ELISA 的實驗結果也揭示了G2和6-9能同時結合至RBD上。這些單株抗體將可開發成能準確診斷MERS-CoV的酵素連結免疫吸附分析法及快速免疫色譜分析試片。而這些單株抗體是否能阻斷棘蛋白與DPP4結合的能力仍需進一步測試。zh_TW
dc.description.abstractIn 2012, a novel coronavirus was reported in Saudi Arabia and spread out worldwide. The novel coronavirus was then officially named as Middle East respiratory syndrome coronavirus (MERS-CoV) by WHO. The mortality of MERS-CoV reaches 36%, much higher than 9.6% for SARS-CoV which caused worldwide pandemic in 2002. Thus, an effective diagnostic tool and medical treatment would be urgently needed to prevent worse pandemic. The MERS-CoV spike protein is an important surface antigen known to mediate host-receptor binding interaction and virus entry. This spike protein can be divided to two functional subunits. The S1 subunit, including receptor binding domain (RBD), can bind with dipeptidyl peptidase 4 (DPP4) on host cells. In this research, two clones of monoclonal antibodies (mAbs) A8 and G2 against MERS-CoV RBD were successfully produced. The epitope mapping experiments reveal that A8, G2, and another 6-9 mAbs previously developed in our laboratory have different binding epitopes. The results of antibody isotyping exhibit that A8, G2 and 6-9 mAbs are all IgG1 with kappa light chains. Results of sandwich ELISA (enzyme-linked immunosorbent assay) illustrated that G2 and 6-9 mAbs can simultaneously bind on RBD. G2 and 6-9 mAbs would be worth to develop into ELISA and rapid immunochromatographic strip test that accurately diagnose MERS-CoV. The capabilities of mAbs for blocking spike protein binding to DPP4 shall be further characterized.en
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dc.description.tableofcontents中文摘要 i
ABSTRACT ii
CONTENTS iii
LIST OF TABLES AND FIGURES vi
ABBREVIATION TABLE viii
Chapter 1 Introduction 1
1.1 Middle East respiratory syndrome coronavirus 1
1.1.1 History and epidemiology of MERS-CoV 1
1.1.2 Genomics of MERS-CoV 2
1.1.3 Structure of MERS-CoV 3
1.1.4 MERS-CoV viral entry to host cells 4
1.1.5 Therapeutic and diagnostic for MERS-CoV 4
Chapter 2 Rationale and Specific aims 6
Chapter 3 Materials and Methods 7
3.1 Baculovirus expression system 7
3.1.1 Generation of pFastBacTM expression vectors 7
3.1.2 Generation of expression bacmids 9
3.1.3 Expression of recombinant protein in insect cell 9
3.2 E. coli expression system 10
3.2.1 Generation of pET-28a (+) expression vectors 10
3.2.2 Expression of target genes in E. coli BL21 (DE3) 11
3.2.3 Purification of recombinant proteins by Ni-NTA Affinity Chromatography 12
3.2.4 Desalting and buffer exchange for recombinant proteins 13
3.3 Hybridoma technology 14
3.3.1 Antigen immunization 14
3.3.2 Mice serum collection 15
3.3.3 Mice B-lymphocytes fusion with myeloma cells 15
3.3.4 Monoclonal antibody screening 17
3.4 Monoclonal antibody characterization 18
3.4.1 Epitope mapping 18
3.4.2 Antibody isotyping 19
3.4.3 Sandwich ELISA 19
Chapter 4 Results 21
4.1 Production of MERS-CoV RBD and HR1-HR2 recombinant proteins in baculovirus expression system 21
4.1.1 Plasmid construction of MERS-CoV RBD and HR1-HR2 for baculovirus expression system 21
4.1.2 Protein expression of recombinant MERS-CoV RBD and HR1-HR2 in baculovirus expression system 22
4.2 Production of MERS-CoV RBD and HR1-HR2 recombinant proteins in E. coli expression system 23
4.2.1 Plasmid construction of MERS-CoV RBD and HR1-HR2 for E. coli expression system 23
4.2.2 Protein purification of recombinant MERS-CoV RBD and HR1-HR2 in E. coli expression system 24
4.2.3 Recombinant MERS-CoV RBD and HR1-HR2 antigen preparation for monoclonal antibody production 25
4.3 Production of anti-RBD and anti-HR1-HR2 monoclonal antibodies by hybridoma technology 26
4.3.1 Titer confirmation of serum antibody for antigens immunized mice 26
4.3.2 Screening of monoclonal antibody recognizing recombinant MERS-CoV RBD and HR1-HR2 27
4.4 Characteristics of anti-RBD monoclonal antibodies 28
4.4.1 Binding specificity of anti-RBD monoclonal antibodies 28
4.4.2 Binding epitopes for anti-RBD monoclonal antibodies 29
4.4.3 Isotypes of anti-RBD monoclonal antibodies 31
4.4.4 Capability of G2 and 6-9 mAbs simultaneously binding on MERS-CoV RBD 31
Chapter 5 Discussion 33
REFERENCE 37
TABLES AND FIGURES 44
dc.language.isoen
dc.subject單株抗體zh_TW
dc.subject中東呼吸症候群冠狀病毒zh_TW
dc.subject棘蛋白zh_TW
dc.subject受體結合域zh_TW
dc.subjectDPP4zh_TW
dc.subjectmonoclonal antibodyen
dc.subjectspike proteinen
dc.subjectMERS-CoVen
dc.subjectdipeptidyl peptidase 4 (DPP4)en
dc.subjectreceptor binding domain (RBD)en
dc.title開發抗中東呼吸症候群冠狀病毒棘蛋白之單株抗體zh_TW
dc.titleDevelopment of Monoclonal Antibodies Targeting the MERS-CoV Spike Proteinen
dc.typeThesis
dc.date.schoolyear108-1
dc.description.degree碩士
dc.contributor.oralexamcommittee廖憶純,吳?承,陳慧文
dc.subject.keyword中東呼吸症候群冠狀病毒,棘蛋白,受體結合域,單株抗體,DPP4,zh_TW
dc.subject.keywordMERS-CoV,spike protein,receptor binding domain (RBD),monoclonal antibody,dipeptidyl peptidase 4 (DPP4),en
dc.relation.page70
dc.identifier.doi10.6342/NTU201904163
dc.rights.note有償授權
dc.date.accepted2020-02-14
dc.contributor.author-college生命科學院zh_TW
dc.contributor.author-dept生化科技學系zh_TW
dc.date.embargo-lift2025-02-21-
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