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| DC 欄位 | 值 | 語言 |
|---|---|---|
| dc.contributor.advisor | 李昆達(Kung-Ta Lee) | |
| dc.contributor.author | Shang-Yun Chen | en |
| dc.contributor.author | 陳尚昀 | zh_TW |
| dc.date.accessioned | 2021-07-11T14:46:57Z | - |
| dc.date.available | 2025-08-15 | |
| dc.date.copyright | 2020-08-28 | |
| dc.date.issued | 2020 | |
| dc.date.submitted | 2020-08-15 | |
| dc.identifier.citation | Aggarwal, B. B., Gupta, S. C., Kim, J. H. (2012). Historical perspectives on tumor necrosis factor and its superfamily: 25 years later, a golden journey. Blood Adv., 119: 651-665. Ali, L., Goraya, M. U., Arafat, Y., Ajmal, M., Chen, J.-L., Yu, D. (2017). Molecular mechanism of quorum-sensing in Enterococcus faecalis: Its role in virulence and therapeutic approaches. International journal of molecular sciences, 18: 960. Altan-Bonnet, G., Mukherjee, R. (2019). Cytokine-mediated communication: A quantitative appraisal of immune complexity. Nat. Rev. Immunol., 19: 205-217. Au - Letourneau, J., Au - Levesque, C., Au - Berthiaume, F., Au - Jacques, M., Au - Mourez, M. (2011). In vitro assay of bacterial adhesion onto mammalian epithelial cells. J. Vis. Exp.: e2783. Barnes, A. M. T., Ballering, K. S., Leibman, R. S., Wells, C. L., Dunny, G. M. (2012). Enterococcus faecalis produces abundant extracellular structures containing DNA in the absence of cell lysis during early biofilm formation. Mbio, 3: e00193-00112. Barrila, J., Yang, J., Crabbé, A., Sarker, S. F., Liu, Y., Ott, C. M., Nelman-Gonzalez, M. A., Clemett, S. J., Nydam, S. D., Forsyth, R. J., Davis, R. R., Crucian, B. E., Quiriarte, H., Roland, K. L., Brenneman, K., Sams, C., Loscher, C., Nickerson, C. A. (2017). Three-dimensional organotypic co-culture model of intestinal epithelial cells and macrophages to study Salmonella enterica colonization patterns. NPJ Microgravity, 3(1): 10. Barsumian, E. L., Isersky, C., Petrino, M. G., Siraganian, R. P. (1981). IgE-induced histamine release from rat basophilic leukemia cell lines: Isolation of releasing and nonreleasing clones. Eur. J. Immunol., 11: 317-323. Barzegari, A., Kheyrolahzadeh, K., Hosseiniyan Khatibi, S. M., Sharifi, S., Memar, M. Y., Zununi Vahed, S. (2020). The battle of probiotics and their derivatives against biofilms. Infect Drug Resist, 13: 659-672. Bi, D., Lai, Q., Cai, N., Li, T., Zhang, Y., Han, Q., Peng, Y., Xu, H., Lu, J., Bao, W., Liu, Q., Xu, X. (2018). Elucidation of the molecular-mechanisms and in vivo evaluation of the anti-inflammatory effect of alginate-derived seleno-polymannuronate. J. Agric. Food Chem., 66: 2083-2091. Breuer, R. J., Hirt, H., Dunny, G. M. (2018). Mechanistic features of the enterococcal pcf10 sex pheromone response and the biology of Enterococcus faecalis in its natural habitat. J. Bacteriol., 200: e00733-00717. Cabinian, A., Sinsimer, D., Tang, M., Jang, Y., Choi, B., Laouar, Y., Laouar, A. (2018). Gut symbiotic microbes imprint intestinal immune cells with the innate receptor slamf4 which contributes to gut immune protection against enteric pathogens. Gut, 67: 847-859. Cencič, A., Langerholc, T. (2010). Functional cell models of the gut and their applications in food microbiology — a review. Int. J. Food Microbiol., 141: S4-S14. Ch’ng, J.-H., Chong, K. K. L., Lam, L. N., Wong, J. J., Kline, K. A. (2019). Biofilm-associated infection by enterococci. Nat. Rev. Microbiol., 17: 82-94. Chambers, H. F., Deleo, F. R. (2009). Waves of resistance: Staphylococcus aureus in the antibiotic era. Nat Rev Microbiol, 7: 629-641. Chaplin, D. D. (2010). Overview of the immune response. J Allergy Clin Immunol, 125: S3-S23. Dale, J. L., Cagnazzo, J., Phan, C. Q., Barnes, A. M., Dunny, G. M. (2015). Multiple roles for Enterococcus faecalis glycosyltransferases in biofilm-associated antibiotic resistance, cell envelope integrity, and conjugative transfer. Antimicrob. Agents Chemother., 59: 4094-4105. Fleming, A. (1929). On the antibacterial action of cultures of a penicillium, with special reference to their use in the isolation of B. influenza. Br J Exp Pathol, 10: 226-236. Fujiya, M., Musch, M. W., Nakagawa, Y., Hu, S., Alverdy, J., Kohgo, Y., Schneewind, O., Jabri, B., Chang, E. B. (2007). The Bacillus subtilis quorum-sensing molecule CSF contributes to intestinal homeostasis via OCTN2, a host cell membrane transporter. Cell Host Microbe, 1: 299-308. Gácser, A., Tiszlavicz, Z., Németh, T., Seprényi, G., Mándi, Y. (2014). Induction of human defensins by intestinal Caco-2 cells after interactions with opportunistic Candida species. Microbes Infect., 16: 80-85. Gill, D., Nicholas, B., Aaron, W., Kevin, O. K. (2009). The roles of antimicrobial peptides in innate host defense. Curr. Pharm. Des., 15: 2377-2392. Handel, A., Margolis, E., Levin, B. R. (2009). Exploring the role of the immune response in preventing antibiotic resistance. J. Theor. Biol., 256(4): 655-662. Helander, H. F., Fändriks, L. (2014). Surface area of the digestive tract – revisited. Scand. J. Gastroenterol., 49: 681-689. Hill, C., Guarner, F., Reid, G., Gibson, G. R., Merenstein, D. J., Pot, B., Morelli, L., Canani, R. B., Flint, H. J., Salminen, S., Calder, P. C., Sanders, M. E. (2014). The international scientific association for probiotics and prebiotics consensus statement on the scope and appropriate use of the term probiotic. Nat Rev Gastroenterol Hepatol, 11: 506-514. Hirt, H., Greenwood-Quaintance, K. E., Karau, M. J., Till, L. M., Kashyap, P. C., Patel, R., Dunny, G. M. (2018). Enterococcus faecalis sex pheromone ccf10 enhances conjugative plasmid transfer in Vivo. Mbio, 9: e00037-18. Huang, J. M., La Ragione, R. M., Nunez, A., Cutting, S. M. (2008). Immunostimulatory activity of Bacillus spores. FEMS Immunol Med Microbiol, 53: 195–203. Johnson, A. P. (1994). The pathogenicity of enterococci. J. Antimicrob. Chemother., 33: 1083-1089. Kaplanski, G., Marin, V., Montero-Julian, F., Mantovani, A., Farnarier, C. (2003). IL-6: A regulator of the transition from neutrophil to monocyte recruitment during inflammation. Trends Immunol., 24: 25-29. Kaur, S., Bansal, Y., Kumar, R., Bansal, G. (2020). A panoramic review of il-6: Structure, pathophysiological roles and inhibitors. Bioorg. Med. Chem., 28: 115327. Kaur, S., Sharma, P., Kalia, N., Singh, J., Kaur, S. (2018). Anti-biofilm properties of the fecal probiotic lactobacilli against Vibrio spp. Front. Cell. Infect. Microbiol., 8: 120. Kiymaci, M. E., Altanlar, N., Gumustas, M., Ozkan, S. A., Akin, A. (2018). Quorum sensing signals and related virulence inhibition of Pseudomonas aeruginosa by a potential probiotic strain's organic acid. Microb Pathog, 121: 190-197. Kuo, L.-C., Cheng, W.-Y., Wu, R.-Y., Huang, C.-J., Lee, K.-T. (2006). Hydrolysis of black soybean isoflavone glycosides by Bacillus subtilis natto. Appl. Microbiol. Biotechnol., 73: 314-320. Kuo, L. C., Lee, K. T. (2008). Cloning, expression, and characterization of two beta-glucosidases from isoflavone glycoside-hydrolyzing Bacillus subtilis natto. J Agric Food Chem, 56: 119-125. Lenaerts, K., Bouwman, F. G., Lamers, W. H., Renes, J., Mariman, E. C. (2007). Comparative proteomic analysis of cell lines and scrapings of the human intestinal epithelium. BMC Genom., 8: 91. Li, X., Xiupeng, W., Ito, A. (2018). Tailoring inorganic nanoadjuvants towards next-generation vaccines. Chem. Soc. Rev., 47: 4954-4980. Martín, R., Langella, P. (2019). Emerging health concepts in the probiotics field: Streamlining the definitions. Front. Microbiol., 10: 1047. Mohamed, J. A., Huang, D. B. (2007). Biofilm formation by enterococci. J. Med. Microbiol., 56: 1581-1588. Monastero, R. N., Pentyala, S. (2017). Cytokines as biomarkers and their respective clinical cutoff levels. Int. J. Inflam., 2017: 4309485-4309485. Monserrat-Martinez, A., Gambin, Y., Sierecki, E. (2019). Thinking outside the bug: Molecular targets and strategies to overcome antibiotic resistance. Int. J. Mol. Sci., 20: 1255. Morehead, M. S., Scarbrough, C. (2018). Emergence of global antibiotic resistance. Prim. Care, 45: 467-484. Munita, J. M., Arias, C. A. (2016). Mechanisms of antibiotic resistance. Microbiol. Spectr., 4(2). Okano, A., Isley, N. A., Boger, D. L. (2017). Peripheral modifications of [Ψ[CH2NH]Tpg4] vancomycin with added synergistic mechanisms of action provide durable and potent antibiotics. Proc. Natl. Acad. Sci. U.S.A., 114: e5052-5061. Paulsen, I. T., Banerjei, L., Myers, G. S. A., Nelson, K. E., Seshadri, R., Read, T. D., Fouts, D. E., Eisen, J. A., Gill, S. R., Heidelberg, J. F., Tettelin, H., Dodson, R. J., Umayam, L., Brinkac, L., Beanan, M., Daugherty, S., DeBoy, R. T., Durkin, S., Kolonay, J., Madupu, R., Nelson, W., Vamathevan, J., Tran, B., Upton, J., Hansen, T., Shetty, J., Khouri, H., Utterback, T., Radune, D., Ketchum, K. A., Dougherty, B. A., Fraser, C. M. (2003). Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis. Science, 299: 2071-2074. Piewngam, P., Zheng, Y., Nguyen, T. H., Dickey, S. W., Joo, H.-S., Villaruz, A. E., Glose, K. A., Fisher, E. L., Hunt, R. L., Li, B., Chiou, J., Pharkjaksu, S., Khongthong, S., Cheung, G. Y. C., Kiratisin, P., Otto, M. (2018). Pathogen elimination by probiotic bacillus via signalling interference. Nature, 562: 532-537. Saarela, M., Lähteenmäki, L., Crittenden, R., Salminen, S., Mattila-Sandholm, T. (2002). Gut bacteria and health foods—the European perspective. Int. J. Food Microbiol., 78: 99-117. Sanders, M. E., Merenstein, D., Merrifield, C. A., Hutkins, R. (2018). Probiotics for human use. Nutr. Bull., 43: 212-225. Solomon, S. L., Oliver, K. B. (2014). Antibiotic resistance threats in the United States: Stepping back from the brink. Am Fam Physician, 89: 938-941. Spinler, J. K., Taweechotipatr, M., Rognerud, C. L., Ou, C. N., Tumwasorn, S., Versalovic, J. (2008). Human-derived probiotic Lactobacillus reuteri demonstrate antimicrobial activities targeting diverse enteric bacterial pathogens. Anaerobe, 14: 166-171. Su, D.-L., Lu, Z.-M., Shen, M.-N., Li, X., Sun, L.-Y. (2012). Roles of pro- and anti-inflammatory cytokines in the pathogenesis of SLE. J. Biomed. Biotechnol., 2012: 347141. Tan, Y., Leonhard, M., Moser, D., Schneider-Stickler, B. (2017). Inhibition activity of Lactobacilli supernatant against fungal-bacterial multispecies biofilms on silicone. Microb. Pathog., 113: 197-201. Thankappan, B., Ramesh, D., Ramkumar, S., Natarajaseenivasan, K., Anbarasu, K. (2015). Characterization of Bacillus spp. From the gastrointestinal tract of Labeo rohita—towards to identify novel probiotics against fish pathogens. Appl. Biochem. Biotechnol., 175: 340-353. Thursby, E., Juge, N. (2017). Introduction to the human gut microbiota. Biochem. J., 474: 1823-1836. Tumor necrosis factor alfa. (2016). In J. K. Aronson (Ed.), Meyler's side effects of drugs 6: 230-232. Willett, J. L. E., Ji, M. M., Dunny, G. M. (2019). Exploiting biofilm phenotypes for functional characterization of hypothetical genes in Enterococcus faecalis. NPJ Biofilms Microbiomes, 5: 23. Zheng, J.-x., Bai, B., Lin, Z.-w., Pu, Z.-y., Yao, W.-m., Chen, Z., Li, D.-y., Deng, X.-b., Deng, Q.-w., Yu, Z.-j. (2018). Characterization of biofilm formation by Enterococcus faecalis isolates derived from urinary tract infections in China. J. Med. Microbiol., 67: 60-67. | |
| dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/78230 | - |
| dc.description.abstract | 糞腸球菌 (Enterococcus faecalis) 為一常見於脊椎動物腸道之革蘭氏陽性菌,一般對人體無害。近年來發現,因糞腸球菌對多種抗生素具抗性,當病人服用抗生素以治療細菌感染時,糞腸球菌為少數可倖存並於腸胃道形成優勢之菌種。當其產生群體感應效應 (quorum-sensing) 並發展出成熟生物膜 (biofilm) 之後,會表達與致病性及多種抗藥性相關之基因。且糞腸球菌可藉由接合式質體轉移 (conjugative plasmid transfer),將其抗藥性基因轉移予不具抗藥性之菌株,使得抗藥性快速擴散,為院內感染 (nosocomial infection) 之主要病原菌之一。本實驗室先前研究發現,納豆菌 (Bacillus subtilis natto NTU18) 之培養上清液可有效抑制接合式質體 pCF10 轉移,具有應用於抑制糞腸球菌抗藥性基因傳遞之潛力。糞腸球菌多由傷口處或腸胃道感染人體,本研究欲於腸道表皮細胞及免疫細胞等胞外環境模擬人體腸胃道,探討納豆菌培養上清液對糞腸球菌之影響。首先,評估該上清液對細胞存活率及特定細胞激素之影響。結果顯示,納豆菌培養上清液對人體腸道上皮細胞株 Caco-2、大鼠嗜鹼性白血病細胞株 RBL-2H3 及小鼠巨噬細胞株 Raw264.7 之細胞存活率皆無明顯影響,且可顯著提升小鼠免疫細胞 TNF- 之分泌量達 3375 pg/ml,顯示其可提升免疫力。接著探討該上清液對糞腸球菌貼附於腸道上皮細胞之影響,並觀察糞腸球菌之生長情形及其形成生物膜之能力。實驗結果發現,隨著納豆菌培養上清液的添加,雖然糞腸球菌之生長無明顯變化,然而其對於腸道表皮細胞之貼附率相較於未添加之組別大幅降低超過 50%,且於 24 小時內形成生物膜之總量亦減少約 11.4%,推測其可預防糞腸球菌於腸道上皮細胞表面形成菌落並且抑制其生物膜之生成。接下來的實驗,我們將進一步探討納豆菌培養上清液是透過何種機制以達到上述功效,期許未來能發展為預防糞腸球菌感染及抗藥性傳遞之新興成分。 | zh_TW |
| dc.description.abstract | Enterococcus faecalis is a commensal bacterium in human gastrointestinal tract that is generally regarded as harmless. Recently, it is found that when antibiotics are used to treat bacterial infections, due to the resistance of E. faecalis to multiple antibiotics, E. faecalis is the small minority of bacterium that can survive in the gastrointestinal tract after patients take antibiotics. Once E. faecalis become the dominant bacterium in the gastrointestinal tract, they would generate a quorum-sensing effect and develop into a mature biofilm. At this time, E. faecalis would express more virulence and antibiotic resistance genes. What makes it trickier is that E. faecalis could transfer antibiotic resistance genes to resistance-free strains via their conjugative plasmid transfer systems. This event further spreads the antibiotic resistance and let E. faecalis gradually becomes one of the main pathogens of nosocomial infections. In previous study of our laboratory, it was found that the culture supernatant of Bacillus subtilis natto NTU18 could inhibit transfer of the antibiotic resistance plasmid pCF10 between E. faecalis. E. faecalis mostly infects the human body from the wound or gastrointestinal tract; therefore, the purpose of this study is to evaluate whether the culture supernatant of B. subtilis natto NTU18 has the similar effect we had observed in simulated intestinal model created by intestinal epithelial cells and immune cells. We first evaluated the cell viability of cells, and explore whether the culture supernatant has the effect of cytokines production. The results showed that the culture supernatant of B. subtilis natto had no obvious effect on the cell survival rate of Caco-2 (human intestinal epithelial cell), RBL-2H3 (rat basophilic leukemia cell) and Raw264.7 (mouse macrophage cell). The supernatant can also significantly increase the secretion of TNF-α in mice immune cells (up to 3375 pg / ml), which is the symbol for immunity improvement. In addition, we further explored that with the treatment of culture supernatant of B. subtilis natto, the adhesion rate of E. faecalis to intestinal epithelial cells would significantly decrease by more than 50% compared with the untreated group, which indicated that it could prevent E. faecalis from forming colonies on the intestinal cells’ surface. Besides, the supernatant could also decrease 11.4% of the total biomass of biofilm that E. faecalis formed within 24 hours. In the next step, we would collect the cells and E. faecalis that have been treated with the supernatant to look into their gene expression. We hope to find the mechanisms that natto culture supernatant used to achieve the inhibition effects on bioactivities on E. faecalis we have observed, and expect that it can be developed into a new drug for preventing E. faecalis infection and drug resistance transmission in the future. | en |
| dc.description.provenance | Made available in DSpace on 2021-07-11T14:46:57Z (GMT). No. of bitstreams: 1 U0001-1308202015314300.pdf: 5349596 bytes, checksum: 6341b94710dd2041dcdaa82e929dcbd2 (MD5) Previous issue date: 2020 | en |
| dc.description.tableofcontents | 口試委員會審定書 iii 致謝 iv 摘要 v Abstract vi 目錄 viii 圖目錄 xi 第1章 文獻回顧與探討 1 1.1 抗生素 1 1.1.1 抗生素之發展 1 1.1.2 抗藥性之危機 3 1.2 糞腸球菌 4 1.2.1 糞腸球菌之抗藥性及致病性 4 1.2.2 糞腸球菌之感染途徑 5 1.3 益生菌 8 1.3.1 益生菌之定義 8 1.3.2 益生菌對致病菌之影響 10 1.3.3 納豆菌 11 1.4 人體免疫系統 12 1.4.1 人體免疫系統之簡介 12 1.4.2 細胞激素之簡介 13 1.4.3 與先天型免疫相關之常見細胞激素 15 1.5 以細胞實驗於體外模擬人體腸胃道微環境 15 1.5.1 人類腸道上皮細胞 Caco-2 15 1.5.2 小鼠巨噬細胞 Raw264.7 及大鼠嗜鹼性球細胞 RBL-2H3 16 第2章 研究動機 18 實驗架構 20 第3章 材料與方法 21 3.1 實驗菌株 21 3.2 實驗細胞 21 3.3 納豆菌培養上清液的製備 22 3.4 細胞培養 22 3.5 細胞毒性測試 23 3.6 細胞激素之測定(酵素連結免疫吸附分析法) 23 3.7 糞腸球菌對腸道表皮細胞之貼附 24 3.8 糞腸球菌生物膜及生長之測定 25 3.9 統計與分析方法 26 第4章 結果與討論 27 4.1 顯微鏡觀察納豆菌培養上清液對細胞之影響 27 4.2 納豆菌培養上清液對細胞存活率之影響 29 4.3 納豆菌培養上清液對 Raw264.7 細胞激素分泌之影響 31 4.4 納豆菌培養上清液對糞腸球菌於 Caco-2 貼附之影響 35 4.5 納豆菌培養上清液對糞腸球菌生長情形及生物膜生成之影響 39 第5章 討論 42 第6章 結論及未來展望 46 第7章 參考資料 47 | |
| dc.language.iso | zh-TW | |
| dc.subject | 抗生物膜 | zh_TW |
| dc.subject | 糞腸球菌 | zh_TW |
| dc.subject | 納豆菌 | zh_TW |
| dc.subject | 抗生素抗藥性 | zh_TW |
| dc.subject | 細胞激素 | zh_TW |
| dc.subject | 貼附 | zh_TW |
| dc.subject | Enterococcus faecalis | en |
| dc.subject | anti-biofilm | en |
| dc.subject | adhesion | en |
| dc.subject | cytokines | en |
| dc.subject | antibiotic resistance | en |
| dc.subject | Bacillus subtilis natto | en |
| dc.title | 納豆菌培養液於細胞模擬之腸道微環境對糞腸球菌生長之影響 | zh_TW |
| dc.title | Effects on the growth of Enterococcus faecalis by Bacillus subtilis natto NTU18 culture supernatant treatment in vitro | en |
| dc.type | Thesis | |
| dc.date.schoolyear | 108-2 | |
| dc.description.degree | 碩士 | |
| dc.contributor.oralexamcommittee | 許輔(Fuu Sheu),何士慶(Shih-Ching Ho),劉啟德(Chi-Te Liu),蔡黛華(Dai-Hua Tsai) | |
| dc.subject.keyword | 糞腸球菌,納豆菌,抗生素抗藥性,細胞激素,貼附,抗生物膜, | zh_TW |
| dc.subject.keyword | Enterococcus faecalis,Bacillus subtilis natto,antibiotic resistance,cytokines,adhesion,anti-biofilm, | en |
| dc.relation.page | 53 | |
| dc.identifier.doi | 10.6342/NTU202003272 | |
| dc.rights.note | 有償授權 | |
| dc.date.accepted | 2020-08-17 | |
| dc.contributor.author-college | 生命科學院 | zh_TW |
| dc.contributor.author-dept | 生化科技學系 | zh_TW |
| dc.date.embargo-lift | 2025-08-15 | - |
| 顯示於系所單位: | 生化科技學系 | |
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