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  1. NTU Theses and Dissertations Repository
  2. 理學院
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請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/7652
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dc.contributor.advisor董成淵(Chen-Yuan Dong)
dc.contributor.authorPo-Hang Tsengen
dc.contributor.author曾柏杭zh_TW
dc.date.accessioned2021-05-19T17:49:06Z-
dc.date.available2022-09-03
dc.date.available2021-05-19T17:49:06Z-
dc.date.copyright2017-09-03
dc.date.issued2017
dc.date.submitted2017-08-24
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[2] World Health Organization. Neurological Disorders: Public Health Challenges. World Health Organization, 2006, Annex4.
[3] Leoncini, Emanuele, et al. 'Frequency of holoprosencephaly in the International Clearinghouse Birth Defects Surveillance Systems: searching for population variations.' Birth Defects Research Part A: Clinical and Molecular Teratology82.8 (2008): 585-591.
[4] Lobo, I., and K. Zhaurova. 'Birth defects: causes and statistics. Nature Education 1: 18.' (2008).
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[6] Masuda, Tomoyuki, et al. 'How thick are the paraffin‐embedded tissue sections routinely prepared in laboratory? A morphometric study using a confocal laser scanning microscope.' Pathology international 48.3 (1998): 179-183.
[7] Chen, Shih-Chi, et al. 'DESIGN OF A PRECISION FLEXURE-BASED VIBRATION MICROTOME FOR WHOLE ORGAN IMAGING.'
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[9] Blumenfeld, Robert S., and Charan Ranganath. 'Prefrontal cortex and long-term memory encoding: an integrative review of findings from neuropsychology and neuroimaging.' The Neuroscientist 13.3 (2007): 280-291.
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[11] Amaral, David G., Helen E. Scharfman, and Pierre Lavenex. 'The dentate gyrus: fundamental neuroanatomical organization (dentate gyrus for dummies).' Progress in brain research 163 (2007): 3-790.
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[18] Cohen, M. Michael. 'Holoprosencephaly: clinical, anatomic, and molecular dimensions.' Birth Defects Research Part A: Clinical and Molecular Teratology76.9 (2006): 658-673.
[19] Ong, S., et al. 'An epidemiological study of holoprosencephaly from a regional congenital anomaly register: 1995–2004.' Prenatal diagnosis 27.4 (2007): 340-347.
[20] A. Jeans and M. Esiri, “Brain histology.” Pract Neurol 2008; 8: 303-310
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[23] Bancroft, John D., and Marilyn Gamble, eds. Theory and practice of histological techniques. Elsevier Health Sciences, 2008.
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[26] Copyright © 2011 National Diagnostics.
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[30] Selever, Jennifer, Jian-Qiang Kong, and Benjamin R. Arenkiel. 'A rapid approach to high-resolution fluorescence imaging in semi-thick brain slices.' Journal of visualized experiments: JoVE 53 (2011).
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[32] V. Schmidt, Comparative anatomy of the pig brain – an integrative magnetic resonance imaging (MRI) study of the porcine brain with special emphasis on the external morphology of the cerebral cortex, Dissertation, University of Giessen (2014)
[33] Mohammed, F., and T. F. Arishiya. 'MICROTOMES AND MICROTOME KNIVES–A REVIEW AND PROPOSED CLASSIFICATION.' Annals of Dentistry19.2 (2013).
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/7652-
dc.description.abstract前腦發育畸形症屬稀罕人腦疾病,胎兒發育期間會發展出不正常的腦室,可依據不同的腦室變形程度加以分類。得此病最嚴重的情況胎兒只會有一個腦室,無法順利發育雙眼與鼻子。通常胎兒發育期間最先會由醫學超音波檢查診斷出該疾病,在最嚴重的情況下出生後無法存活。根據病理學,研究異常人體器官取下之組織樣本時須將組織切片並且由光學顯微鏡在小於釐米尺度的範圍觀察切片的細節。在本研究中,我們利用連續石蠟切片染色後由高解析度白光顯微鏡分析組織切片,並試著比較正常與前腦發育畸形之胎兒腦組織在二維及三維結構上的差異。另外我們也希望透過新型振動式切片技術與雙光子顯微技術的結合發展出更好的腦組織三維完整取像方法。使用任何方式進行組織切片時都會有組織損失的問題,進而增加三維影像接合之變數,本文亦將探討此問題對三維結構重建之影響。zh_TW
dc.description.abstractHoloprosencephaly, a kind of brain disease, is usually identified by ultrasonography on fetuses during gestation and confirmed by Magnetic Resonance Imaging (MRI). In the most severe cases the fetus carries craniofacial malformations Cyclopia and Proboscis above the eye with the nose absent.
In this research we use the standard histological method to study the microscopic anatomy of brain tissue from human postmortem fetal brain with the Holoprosencephaly disease. Consecutive paraffin slices stained with Hematoxylin and Eosin were imaged by light microscopy and the images were then reconstructed into 3D stacks for more information on the anatomy of the disease. We also study the possibility of using agarose for embedding brain tissue along with the oscillating blade cutting technique to obtain better 3D image from slices with two-photon microscopy.
en
dc.description.provenanceMade available in DSpace on 2021-05-19T17:49:06Z (GMT). No. of bitstreams: 1
ntu-106-R04222054-1.pdf: 3013484 bytes, checksum: be3560001738c54f12485efb2736f3df (MD5)
Previous issue date: 2017
en
dc.description.tableofcontents致謝 i
中文摘要 iii
Abstract iv
CONTENTS v
LIST OF FIGURES viii
LIST OF TABLES x
Chapter 1 Introduction 1
1.1 Motivation 1
1.2 Experimental Approach 3
Chapter 2 The Brain 5
2.1 Anatomical Reference 5
2.2 Basic Structure 7
2.2.1 Cerebrum 7
2.2.2 Cerebral Cortex and Layering 8
2.2.3 Hippocampus 10
2.2.4 Corpus Callosum 11
2.2.5 The Ventricular System 12
2.3 Congenital Brain Disease and Holoprosencephaly 13
2.3.1 Anencephaly 14
2.3.2 Lissencephaly 14
2.3.3 Holoprosencephaly 15
Chapter 3 The Standard Histology Approach 18
3.1 Brain Histology and Histopathology 18
3.1.1 Fixation 20
3.1.2 Paraffin Embedding 21
3.1.3 Tissue Sectioning with Microtome 22
3.1.4 Hematoxylin and Eosin Staining 23
3.1.5 Light Microscopy 24
3.2 Methods 26
3.2.1 Sample Preparation 26
3.2.2 Experimental Setup for Light Microscopy 27
3.2.3 Experiment Procedure 28
3.3 Results and Discussion 29
3.3.1 Histological Findings from 2-D Images 29
3.3.2 3-D Analysis of 20 Consecutive Tissue Slices 32
3.3.3 Discussion 41
Chapter 4 The Fresh tissue Approach 43
4.1 Overview of Alternative Histology 43
4.1.1 Agarose 44
4.1.2 The Pig Brain 45
4.2 The Flexure-Based Oscillating Blade System 46
4.2.1 Design of the modified vibrating Microtome 46
4.2.2 Cutting Parameters 48
4.2.3 Blade Material 48
4.2.4 Surface Roughness 51
4.3 Two-Photon Microscopy 52
4.3.1 Fluorescence 52
4.3.2 Two-Photon Fluorescence 54
4.3.3 Fluorescent Dyes and DAPI 55
4.4 Methods 57
4.4.1 Sample preparation 57
4.4.2 Setup of the Oscillating Blade System and Two-Photon LSM 58
4.4.3 Experiment Procedure 60
4.5 Results and Discussion 61
4.5.1 Steel Blade 62
4.5.2 Sapphire Blade 63
4.5.3 Tungsten Carbide Blade 64
4.5.4 Discussion 64
Chapter 5 Conclusion 66
5.1 Comparison of the Histology Techniques 66
5.2 Present Limitations and Future Work 67
REFERENCE 69
dc.language.isoen
dc.title利用組織切片技術研究腦組織三維結構zh_TW
dc.titleSurvey on Brain Tissue 3-D Reconstruction using different Histology techniquesen
dc.typeThesis
dc.date.schoolyear105-2
dc.description.degree碩士
dc.contributor.coadvisor黃佩欣(Pei-Hsin Huang)
dc.contributor.oralexamcommittee陳永芳(Yang-Fang Chen),張顏暉(Yuan-Huei Chang)
dc.subject.keyword前腦發育畸形症,振動式切片技術,組織病理學,人腦,雙光子顯微技術,zh_TW
dc.subject.keywordHoloprosencephaly,Oscillating Microtome,Human Fetal Brain,Histopathology,Two Photon Microscopy,en
dc.relation.page71
dc.identifier.doi10.6342/NTU201704179
dc.rights.note同意授權(全球公開)
dc.date.accepted2017-08-25
dc.contributor.author-college理學院zh_TW
dc.contributor.author-dept物理學研究所zh_TW
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