請用此 Handle URI 來引用此文件：
http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/75409完整後設資料紀錄
| DC 欄位 | 值 | 語言 |
|---|---|---|
| dc.contributor.author | Shang-Zhan Lee | en |
| dc.contributor.author | 李尚展 | zh_TW |
| dc.date.accessioned | 2021-07-01T08:13:04Z | - |
| dc.date.available | 2021-07-01T08:13:04Z | - |
| dc.date.issued | 2003 | |
| dc.identifier.citation | Alves MJ, Coelho H, Collares-Pereira MJ, Coelho MM (2001) Mitochondrial DNA variation in the highly endangered cyprinid fish Anaecypris hispanica: Importance for conservation. Heredity 87, 463-473. Angel B, Joseba E, Lorenzo M, Victor V (1998) Relationships between anchovy (Engraulis encrasicolus) recruitment and environment in the Bay of Biscay (1967-1996). Fisheries Oceanography 7, 375-380. Aoki I, Miyashita K (2000) Dispersal of larvae and juveniles of Japanese anchovy Engraulis japonicus in the Kuroshio Extension and Kuroshio-Oyashio transition regions, western North Pacific Ocean. Fisheries Research 49, 155-164. Begg GA, Waldman JR. (1999) An holistic approach to fish stock identification. Fisheries Research 43, 35-44. Begg GA, Hare JA, Sheehan DD. (1999) The role of life history parameters as indicators of stock structure. Fisheries Research 43, 141 -163. Bembo DG, Carvalho GR, Cingolani N, Pitcher TJ (1996) Electrophoretic analysis of stock structure in Northern Mediterranean anchovies, Engraulis encrasicolus. ICES Journal of Marine Science 53, 115-128. Cadrin SX (2000) Advances in morphometric indenfication of fishery stocks. Fish Biology and Fisheries 10, 91-112. Chen TS (1980) Study and investigation of Bull-ard and anchovy fisheries in coast water of Taiwan. Bull. Taiwan Fish. Res. Inst. 32, 219-233. Chiu TS, Chen CS (1995) Distribution of scombrid larvae (Pisces: Scombridae) in the waters around Taiwan. Journal of the Fisheries Society of Taiwan 22, 303-312. Chiu TS, Chen CS (2001) Growth and temporal variation of two Japanese anchovy cohorts during their recruitment to the East China Sea. Fisheries Research 53, 1-15. Chiu TS, Chen CS (2003) Early life history traits of Japanese anchovy in the northeastern waters of Taiwan, with reference to larval transport. Zoological Studies 42, 248-257. Chiu TS, Young SS, Chen CS (1997) Monthly variation of larval anchovy fishery in Ilan Bay, NE Taiwan, with an evaluation for optimal fishing season. Journal of Fisheries Society of Taiwan 24, 273-282. Chiu TS, Chen CS, Young SS (1999) Age and growth of two co-occurred anchovy species (Encrasicholina puntifer and E. heteroloba) during autumn larval anchovy fishing season in I-Ian Bay, NE Taiwan. Journal of the Fisheries Society of Taiwan 26, 183-190. Chiu TS, Lee YJ, Huang S-W, Yu HT (2002) Polymorphic microsatellite markers for stock identification in Japanese anchovy (Engraulis japonicus). Molecular Ecology Notes 2, 49-50. Churikov D, Matsuoka M, Luan X, Gray AK, Brykov VLA, Gharrett AJ (2001) Assessment of concordance among genealogical reconstructions from various mtDNA segments in three species of Pacific salmon (genus Oncorhynchus). Molecular Ecology 10, 2329-2339. DeWoody JA, Avise JC (2000) Microsatellite variation in marine, freshwater and anadromous fishes compared with other animals. Journal of Fish Biology 56, 461-473. Excoffier L, Smouse P, Quattro J (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131, 479-491. Fausto T, Cesare DN, Ilaria G, Monia T, Stefano T, Elena F, Corrado P (2002) Mitochondrial DNA Sequence variation suggests the lack of genetic heterogeneity in the Adriatic and Ionian stocks of Sardina pilchardus. Marine Biotechnology 4, 163-172. Grant WS (1985) Biochemical genetic stock structure of the southern African anchovy, Engraulis capensis Gilchrist. Journal of Fish Biology 27, 23-29. Grant WS, Bowen BW (1998) Shallow population histories in deep evolutionary lineages of marine fishes: insight from sardines and anchovies and lessons for conservation. Journal of Heredity 89, 415-426. Guarniero IFS, Ungaro N, Tommasini S, Piccinetti C, Tinti F (2002) Control region haplotype variation in the central Mediterranean common sole indicates geographical isolation and population structuring in Italian stocks. Journal of Fish Biology 60, 1459-1474. Hansen JE, Martos P, Madirolas A (2001) Relationship between spatial distribution of the Patagonian stock of Argentine anchovy, Engraulis anchoita, and sea temperatures during late spring to early summer. Fisheries Oceanography 10, 193-206. Hartl DL (1999) A Primer of Population Genetics. Sinauer Associates, Inc. USA. Hsia KY, Lee KT, Lee MA (1998) Fishing ground formation of larval anchovy in relation to oceanographic and meteorlogical conditions in the I-Lan Bay of notheastern Taiwan. Journal of Fisheries Society of Taiwan 25, 239-249. Huang JB, Chiu TS (1996) Daily growth and length distribution of larval Japanese anchovy (Engraulis japonica) in the neritic waters off Northeastern Taiwan. Acta Zoologica Taiwanica 7, 29-41. Huang JB, Chiu TS (1998) Comparison in nutritional status of larval Japanese anchovy collected from four Kuroshio related waters off northeastern Taiwan. Fisheries Science 64, 844-845. Inoue JG, Miya M, Tsukamoto K, Nishida M (2001) Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus. Fisheries Science 67, 825-835. Jiang SF, Zheng XY (1984) The morphological characters of eggs and larvae of Engraulis japonicus Temminck et Schlegel and its spawning areas in the fishing ground of the south Fujian and Taiwan bank. Taiwan Strait 3, 224-231. Junquera S, Perez-Ga ndaras G (1993) Population diversity in Bay of Biscay anchovy (Engraulis encrasicholus L. 1758) as revealed by multivariate analysis of morphometric and meristic characters. ICES Journal of Marine Science 50, 383-391. Kocher TD, Thomas WK, Meyer A, Edward SV, Paabo S, Villablanca FX, Wilson AC (1989) Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences of the United States of America 86, 6196-6200. Kotlik P, Berrebi P (2001) Phylogeography of the barbel (Barbus barbus) assessed by mitochondrial DNA variation. Molecular Ecology 10, 2177-2185. Lavery S, Moritz C, Fielder DR (1996) Genetic Patterns Suggest Exponential Population Growth in a Declining Species. Molecular Biology and Evolution 13, 1106-1113. Lee MA, Lee KT, Ou HC (1990) The larval anchovy fishing ground formation in the relation to osmotic pressure changes of the coastal waters along southern Taiwan. Journal of Fisheries Society of Taiwan 17, 233-245. Lee MA, Lee KT, Shiah GT (1994) Seasonal changes in commercial catches of larval anchovy in the southwest coastal waters of Taiwan. Journal of Fisheries Society of Taiwan 21, 49-56. Lee MA, Lee KT (1996) The larval anchovy (Engraulis japonicus) fishery in relation to the environmental factors in coastal waters of Fangliao, Taiwan. Fisheries Research 26, 37-48. Murta AG (2000) Morphological variation of horse mackerel (Trachurus trachurus) in the Iberian and North African Atlantic: implications for stock identification. ICES Journal of Marine Science 57, 1240-1248. Nakata H, Kimura S, Okazaki Y, Kasai A (2000) Implications of meso-scale eddies caused by frontal disturbances of the Kuroshio Current for anchovy recruitment. ICES Journal of Marine Science 57, 143-152. Nei M (1987) Molecular Evolutionary Genetics. Columbia University Press, New York, NY, USA. Philippe B (2002) Allozyme, mitochondrial-DNA, and morphometric variability indicate cryptic species of anchovy (Engraulis encrasicolus). Biological Journal of the Linnean Society 75, 261-269. Raymond M, Rousset F (1995a) GENEPOP (Version 1.2): Population genetics software for exact tests and ecumenicism. Journal of Heredity. 86, 248-249. Raymond M, Rousset F (1995b) An exact test for population differentiation. Evolution 49, 1280-1283. Rogers AR, Harpending H (1992) Population growth makes waves in the distribution of pairwise genetic differences. Molecular Biology and Evolution 9, 552-569. Ruzzante DE, Taggart CT, Cook D (1999) A review of the evidence for genetic structure of cod (Gadus morhua) populations in the NW Atlantic and population affinities of larval cod off Newfoundland and the Gulf of St. Lawrence. Fisheries Research 43, 79-97. Schneider S, Roessli D, Excoffier L (2000) Arlequin: A software for population genetics data analysis. Ver 2.000. Genetics and Biometry Lab, Dept. of Anthropology, University of Geneva. Slatkin M (1985) Rare alleles as indicators in gene flow. Evolution. 39, 53-65. Slatkin M (1995) A Measure of Population Subdivision Based on Microsatellite Allele Frequencies. Genetics 139, 457-462. Smith PJ, Robertson SG, Horn PL, Bull B, Anderson OF, Stanton BR (2002) Multiple techniques for determining stock relationships between orange roughy, Hoplostethus atlanticus, fisheries in the eastern Tasman Sea. Fisheries Research 58, 119-140. Tajima F (1993) Measurement of DNA polymorphism. In: Mechanisms of Molecular Evolution. Introduction to Molecular Palepopulation Biology, edited by Takahata N and Clark AG, Tokyo, Sunderland, MA: Japan Scientific Societies Press, Sinauer Associates, Inc., 37-59. Taylor MI, Verheyen E (2001) Microsatellite data reveals weak population substructuring in Copadichromis sp. 'virginalis kajose', a demersal cichlid from Lake Malawi, Africa. Journal of Fish Biology 59, 593-604. Tudela S, Garcia-Marin JL, Pla C (1999) Genetic structure of the European anchovy, Engraulis encrasicolus 1., in the north-west Mediterranean. Journal of Experimental Marine Biology and Ecology 234, 95-109. Walton C, Handley JM., Collins FH, Harbach RE, Baimai V, Butlin RK (2000) Population Structure and Population History of Anopheles dirus Mosquitoes in Southeast Asia. Molecular Biology and Evolution 17, 962-974. Wongranta T (1983) Diagnosis of 24 new species and proposal of a new name for a species of indo-Pacific clupeoid fishes. Japanese Journal of Ichthyology 29, 385-407. Xia X, Xie Z (2001) DAMBE: Data analysis in molecular biology and evolution. Journal of Heredity 92, 371-373. Young SS, Chiu TS, Chen CS (1992) Resource characteristics of young herring-like fish in the I-lan Bay area-fishing season, major species and size variation. Journal of Fisheries Society of Taiwan 19, 273-281. Young SS, Chiu TS (1994) Ovarian maturation of Japanese anchovy, Engraulis japonicas T. and S., from I-Lan Bay, northeastern Taiwan. Zoological Studies 33, 302-309. Young SS, Chiu TS, Chen CS (1994) A revision of the family Engraulidae (Pisces) from Taiwan. Zoological Studies 33, 217-227. Yu HT, Lee YJ, Huang SW, Chiu TS (2002) Genetic analysis of the populations of Japanese anchovy (Engraulis japonicus) using microsatellite DNA. Marine Biotechnology 4, 471-479. Yu PT, Chiu TS (1994) Fishery target species of larval anchovy fishery in the western central Taiwan. Journal of Fisheries Society of Taiwan 21, 227-239. 馬嘉昌（1995）臺灣北部與陸棚邊緣的夏季流場。國立臺灣大學海洋研究所碩士論文。 陳彥民（2002）衛星遙測應用在台灣東北及西南海域鯷科仔稚魚漁況變動之研究。國立台灣海洋大學漁業科學所碩士論文。 楊樹森（1994）宜蘭灣日本鯷之漁業生物學。國立臺灣大學動物所博士論文。 | |
| dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/75409 | - |
| dc.description.abstract | 棲息於台灣沿岸的日本鯷是其東海族群之端末分支，其仔魚因漁業的利用而受到相當強大的漁獲壓力。本論文藉由瞭解日本鯷經不同洄游路徑抵達台灣，在東、西部海域形成不同系群之關係，加以探討宜蘭灣日本鯷之春季群及秋季群是否為同一母族群所源出。 本分析至少取得133個有效樣本，分別是春季宜蘭灣(1E)44個，春季海峽(1W)44個，及秋季宜蘭灣(3E)45個。分析結果顯示，740個胞色素b表示的單套型岐異度均大於0.995；分子歧異度為0.0141(1E), 0.0130(1W) 及0.0144(3E)，顯示各群鹼基位之歧異度並不高。全體個體間之鹼基數差異平均為10.5±4.8(SD)位，呈單峰正規分佈。群間的變異佔全部變異的4.1％(Fst＝0.041)，但呈現顯著差異，暗示群間具有可區別的分化：1E群與3E群之距離最大，其次為1E群與1W群，但1W群及3E群則顯著性測驗不達5％。以微隨體對位基因分析發現，其對位基因數多達152-302個雙鹼基，除了1E群外，各群內均偏離哈溫平衡，為異形合子不足。形態分析經主成分變方匯集後，第一主成分軸分得81.6％之變異，而第二及第三主成分則共占13.1％之變異；逕以第二軸及第三軸之數值表現，三群之表型（phenotype）並不可區分。本實驗結果推論，宜蘭灣之春、秋系群不是由同一個母族群所從出，亦即其春、秋群間具有分化之痕跡。由FST及RST所反應之海峽系群與秋季宜蘭灣群的綜合性指數顯示，其間之差異不大，海峽與宜蘭灣之日本鯷可用一個均一的系群（stock）加以處理。秋季宜蘭灣群與春季海峽群間之洄游率為10.8-25.0％之間。 | zh_TW |
| dc.description.abstract | The coastal populations of Japanese anchovy are marginal distribution of the fish in the East China Sea. Larval Japanese anchovy suffers huge fishing pressure since 1976 when artisan fishing shifted to commercial pair-trawlers. In order to obtaining fundamental information for reasonable management, I analyze the stock differences between Strait and Ilan Bay, and cohort differences between spring and autumn in the Ilan Bay. At least 133 effective samples without missing data was categorized into 3 groups of spring Ilan Bay (1E), spring Strait (1W) and autumn Ilan Bay (3E). Categorized analysis on cytochrome b gene indicated that haplotypic gene diversity indices greater than 0.995, but molecular diversity indices are low; 0.0141 (1E), 0.0130 (1W) and 0.0144(3). Pair-wise base difference is estimated to 10.5±4.8, showing a normal-type distribution. Although between-group variation takes 4.1% of the total, however group differentiation is supported by 5% significant tests. Microsatellite genes are highly diversified as measured by various allelic numbers of 152-302 di-nucleotides, most of the loci deviated from H-W equilibrium as heterozygote deficiency. Principal analysis on the morphometric variables indicated a subtle phenotypic difference. Based on the finding, I postulate that the spring and autumn anchovy larvae are cohorts originated from 2 spawning populations; the fishes from the Strait and autumn Ilan Bay could be treated as a single unit, and there migration rates are estimated 10.8-25.0%. | en |
| dc.description.provenance | Made available in DSpace on 2021-07-01T08:13:04Z (GMT). No. of bitstreams: 0 Previous issue date: 2003 | en |
| dc.description.tableofcontents | 目錄……………………………………………………I 中文摘要……………………………………………………III 英文摘要……………………………………………………IV 一、前言……………………………………………………1 1．日本鯷……………………………………………………1 2．漁業……………………………………………………2 3．分佈……………………………………………………2 4．系群……………………………………………………4 5．系群及管理……………………………………………………5 6．研究目標……………………………………………………5 二、材料與方法……………………………………………………7 1．採樣……………………………………………………7 2．形態測量……………………………………………………7 2．1 特徵點……………………………………………………7 2．2 測量……………………………………………………7 3．分子資料……………………………………………………8 3．1 DNA萃取……………………………………………………8 3．2 聚合脢連鎖反應……………………………………………………8 3．2．1 胞色素b……………………………………………………8 3．2．2 微隨體……………………………………………………9 4．資料分析……………………………………………………9 4．1 胞色素b之序列分析……………………………………………………9 4．1．1 群內之遺傳變異……………………………………………………9 4．1．2 群間變異……………………………………………………10 4．1．3 AMOVA分析群間的遺傳結構……………………………………………………11 4．2 微隨體基因之分析……………………………………………………11 4．2．1 遺傳變異………………………………………………………………11 4．2．2 哈溫平衡………………………………………………………………12 4．2．3 群間之分化與遺傳距離………………………………………………12 4．2．3．1 群間之分化…………………………………………………………12 4．2．3．2 群間之遺傳距離……………………………………………………13 4．2．3．3 群間之基因交流程度………………………………………………13 4．3 形態資料分析………………………………………………………………13 三、結果…………………………………………………………………………15 1．胞色素b序列…………………………………………………………………15 1．1 群內關係……………………………………………………………………15 1．2 群間關係……………………………………………………………………16 2．微隨體基因……………………………………………………………………16 2．1 群內關係……………………………………………………………………16 2．2 群間差異……………………………………………………………………17 3．形態分析………………………………………………………………………17 3．1 主成分………………………………………………………………………17 3．2 條件因數……………………………………………………………………18 四、討論…………………………………………………………………………19 1．季節群…………………………………………………………………………19 2．系群……………………………………………………………………………20 3．族群分化與群內多樣性………………………………………………………21 4．系群關係與洄游模式之推測…………………………………………………22 五、參考文獻……………………………………………………………………23 圖說………………………………………………………………………………29 表…………………………………………………………………………………31 圖…………………………………………………………………………………41 附錄………………………………………………………………………………58 | |
| dc.language.iso | zh-TW | |
| dc.title | 台灣水域日本鯷系群之分子及形態分析 | zh_TW |
| dc.title | Molecular and morphological analysis on Japanese anchovy stocks around Taiwan | en |
| dc.date.schoolyear | 91-2 | |
| dc.description.degree | 碩士 | |
| dc.relation.page | 58 | |
| dc.rights.note | 未授權 | |
| dc.contributor.author-dept | 生命科學院 | zh_TW |
| dc.contributor.author-dept | 動物學研究所 | zh_TW |
| 顯示於系所單位： | 動物學研究所 | |
文件中的檔案：
沒有與此文件相關的檔案。
系統中的文件，除了特別指名其著作權條款之外，均受到著作權保護，並且保留所有的權利。