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  1. NTU Theses and Dissertations Repository
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請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/74745
完整後設資料紀錄
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dc.contributor.advisor張英?(Ing-Feng Chang)
dc.contributor.authorSih-Sian Wuen
dc.contributor.author吳思賢zh_TW
dc.date.accessioned2021-06-17T09:06:51Z-
dc.date.available2021-12-26
dc.date.copyright2019-12-26
dc.date.issued2019
dc.date.submitted2019-12-20
dc.identifier.citationAchard, P., Cheng, H., De Grauwe, L., Decat, J., Schoutteten, H., Moritz, T., & Harberd, N. P. (2006). Integration of plant responses to environmentally activated phytohormonal signals. Science 311, 91-94.
Achard, P., Gusti, A., Cheminant, S., Alioua, M., Dhondt, S., Coppens, F., & Genschik, P. (2009). Gibberellin signaling controls cell proliferation rate in Arabidopsis. Current Biology 19, 1188-1193.
Agarwal, P. K., & Jha, B. (2010). Transcription factors in plants and ABA dependent and independent abiotic stress signalling. Biologia Plantarum 54, 201-212.
Akula, R., & Ravishankar, G. A. (2011). Influence of abiotic stress signals on secondary metabolites in plants. Plant Signaling & Behavior 6, 1720-1731.
Amara, I., Zaidi, I., Masmoudi, K., Ludevid, M. D., Pagès, M., Goday, A., & Brini, F. (2014). Insights into late embryogenesis abundant (LEA) proteins in plants: from structure to the functions. American Journal of Plant Sciences 5, 3440-3455.
Atkinson, N. J., & Urwin, P. E. (2012). The interaction of plant biotic and abiotic stresses: from genes to the field. Journal of Experimental Botany 63, 3523-3543.
Battaglia, M., Olvera-Carrillo, Y., Garciarrubio, A., Campos, F., & Covarrubias, A. A. (2008). The enigmatic LEA proteins and other hydrophilins. Plant Physiology 148, 6-24.
Chang, H. C., Tsai, M. C., Wu, S. S., & Chang, F. (2019). Regulation of ABI5 expression by ABF3 during salt stress responses in Arabidopsis thaliana. Botanical Studies 60, 16-29.
Chen, Y. T., Liu, H., Stone, S., & Callis, J. (2013). ABA and the ubiquitin E3 ligase KEEP ON GOING affect proteolysis of the Arabidopsis thaliana transcription factors ABF 1 and ABF 3. The Plant Journal 75, 965-976.
Clough, S.J., & Bent, A.F. (1998). Floral dip: a simplified method for Agrobacterium -mediated transformation of Arabidopsis thaliana. The Plant Journal 16, 735-743.
De Ollas, C., & Dodd, I. C. (2016). Physiological impacts of ABA–JA interactions under water-limitation. Plant Molecular Biology 91, 641-650.
Egerton‐Warburton, L. M., Balsamo, R. A., & Close, T. J. (1997). Temporal accumulation and ultrastructural localization of dehydrins in Zea mays. Physiologia Plantarum, 101, 545-555.
Finkelstein, R. (2013). Abscisic acid synthesis and response. The Arabidopsis book/American Society of Plant Biologists 11.
Finkelstein, R., Gampala, S. S., Lynch, T. J., Thomas, T. L., & Rock, C. D. (2005). Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE (ABI) 5 and ABRE-BINDING FACTOR (ABF) 3. Plant Molecular Biology 59, 253-267.
Fujita, M., Fujita, Y., Noutoshi, Y., Takahashi, F., Narusaka, Y., Yamaguchi-Shinozaki, K., & Shinozaki, K. (2006). Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks. Current Opinion in Plant Biology 9, 436-442.
Fujita, Y., Fujita, M., Satoh, R., Maruyama, K., Parvez, M.M., Seki, M., Hiratsu, K., Ohme-Takagi, M., Shinozaki, K., & Yamaguchi-Shinozaki, K. (2005). AREB1 is a transcription activator of novel ABRE-dependent ABA signaling that enhances drought stress tolerance in Arabidopsis. The Plant Cell 17, 3470-3488.
Gendrel, A. V., Lippman, Z., Martienssen, R., & Colot, V. (2005). Profiling histone modification patterns in plants using genomic tiling microarrays. Nature Methods 2, 213-218.
Grelet, J., Benamar, A., Teyssier, E., Avelange-Macherel, M. H., Grunwald, D., & Macherel, D. (2005). Identification in pea seed mitochondria of a late-embryogenesis abundant protein able to protect enzymes from drying. Plant Physiology. 137, 157-167.
Han, C., & Yang, P. (2015). Studies on the molecular mechanisms of seed germination. Proteomics 15, 1671-1679.
Holdsworth, M. J., Bentsink, L., & Soppe, W. J. (2008). Molecular networks regulating Arabidopsis seed maturation, after‐ripening, dormancy and germination. New Phytologist 179, 33-54.
Hundertmark, M., & Hincha, D. K. (2008). LEA (late embryogenesis abundant) proteins and their encoding genes in Arabidopsis thaliana. BMC genomics 9, 118-140.
Jakoby, M., Weisshaar, B., Dröge-Laser, W., Vicente-Carbajosa, J., Tiedemann, J., Kroj, T., & Parcy, F. (2002). bZIP transcription factors in Arabidopsis. Trends in Plant Science 7, 106-111.
Ji, H., Pardo, J. M., Batelli, G., Van Oosten, M. J., Bressan, R. A., & Li, X. (2013). The Salt Overly Sensitive (SOS) pathway: established and emerging roles. Molecular Plant 6, 275-286.
Kang, J. Y., Choi, H. I., Im, M. Y., & Kim, S. Y. (2002). Arabidopsis basic leucine zipper proteins that mediate stress-responsive abscisic acid signaling. The Plant Cell 14, 343-357.
Lata, C., Yadav, A., & Pras, M. (2011). Role of plant transcription factors in abiotic stress tolerance. Abiotic Stress Response in Plants 10, 270-296.
Lee, M., & Yoe, H. (2015). Analysis of environmental stress factors using an artificial growth system and plant fitness optimization. BioMed Research International 2015, 6-12.
Lefebvre, V., North, H., Frey, A., Sotta, B., Seo, M., Okamoto, M., & Marion‐Poll, A. (2006). Functional analysis of Arabidopsis NCED6 and NCED9 genes indicates that ABA synthesized in the endosperm is involved in the induction of seed dormancy. The Plant Journal 45, 309-319.
Liu, Y., Liu, G., Li, R., Zou, Y., & Zheng, Y. (2010). Functions of late embryogenesis abundant proteins in desiccation-tolerance of organisms: a review. Chinese Journal of Biotechnology 26, 569-575.
Magome, H., Yamaguchi, S., Hanada, A., Kamiya, Y., & Oda, K. (2008). The DDF1 transcriptional activator upregulates expression of a gibberellin‐deactivating gene, GA2ox7, under high‐salinity stress in Arabidopsis. The Plant Journal 56, 613-626.
Munns, R., & Tester, M. (2008). Mechanisms of salinity tolerance. Annu Rev Plant Biol 59, 651-681.
Nambara, E., Okamoto, M., Tatematsu, K., Yano, R., Seo, M., & Kamiya, Y. (2010). Abscisic acid and the control of seed dormancy and germination. Seed Science Research 20, 55-67.
Ng, L. M., Melcher, K., Teh, B. T., & Xu, H. E. (2014). Abscisic acid perception and signaling: structural mechanisms and applications. Acta Pharmacologica Sinica 35, 567-584.
Okamoto, M., Kuwahara, A., Seo, M., Kushiro, T., Asami, T., Hirai, N., & Nambara, E. (2006). CYP707A1 and CYP707A2, which encode abscisic acid 8′-hydroxylases, are indispensable for proper control of seed dormancy and germination in Arabidopsis. Plant Physiology 141, 97-107.
Olvera-Carrillo, Y., Campos, F., Reyes, J. L., Garciarrubio, A., & Covarrubias, A. A. (2010). Functional analysis of the group 4 late embryogenesis abundant proteins reveals their relevance in the adaptive response during water deficit in Arabidopsis. Plant Physiology 154, 373-390.
Raghavendra, A. S., Gonugunta, V. K., Christmann, A., & Grill, E. (2010). ABA perception and signalling. Trends in Plant Science 15, 395-401.
Rajjou, L., Duval, M., Gallardo, K., Catusse, J., Bally, J., Job, C., & Job, D. (2012). Seed germination and vigor. Annual Review of Plant Biology 63, 507-533.
Reyes, J. L., Rodrigo, M. J., Colmenero‐flores, J. M., Gil, J. V., Garay‐arroyo, A. D. R. I. A. N. A., Campos, F., & Covarrubias, A. A. (2005). Hydrophilins from distant organisms can protect enzymatic activities from water limitation effects in vitro. Plant, Cell & Environment. 28, 709-718.
Schwartz, S. H., Qin, X., & Zeevaart, J. A. (2003). Elucidation of the indirect pathway of abscisic acid biosynthesis by mutants, genes, and enzymes. Plant Physiology 131, 1591-1601.
Seif El-Yazal, S., A Seif El-Yazal, M., F Dwidar, E., & M Rady, M. (2015). Phytohormone crosstalk research: cytokinin and its crosstalk with other phytohormones. Current Protein and Peptide Science 16, 395-405.
Shen, Q., Zhang, P. & Ho, T.H. (1996). Modular nature of abscisic acid (ABA) response complexes: composite promoter units that are necessary and sufficient for ABA induction of gene expression in barley. Plant Cell 8, 1107–1119.
Shinozaki, K., & Yamaguchi-Shinozaki, K. (2007). Gene networks involved in drought stress response and tolerance. Journal of Experimental Botany 58, 221-227.
Shoji, T., Suzuki, K., Abe, T., Kaneko, Y., Shi, H., Zhu, J. K., & Hashimoto, T. (2006). Salt stress affects cortical microtubule organization and helical growth in Arabidopsis. Plant and Cell Physiology 47, 1158-1168.
Su, M., Huang, G., Zhang, Q., Wang, X., Li, C., Tao, Y., & Wang, Y. (2016). The LEA protein, ABR, is regulated by ABI5 and involved in dark-induced leaf senescence in Arabidopsis thaliana. Plant Science. 247, 93-103.
Svensson, J., Palva, E. T., & Welin, B. (2000). Purification of recombinant Arabidopsis thaliana dehydrins by metal ion affinity chromatography. Protein Expression and Purification. 20, 169-178.
Wang, W. Q., Liu, S. J., Song, S. Q., & Møller, I. M. (2015). Proteomics of seed development, desiccation tolerance, germination and vigor. Plant Physiology and Biochemistry. 86, 1-15.
Xiang, D. J., Man, L. L., Zhang, C. L., Li, Z. G., & Zheng, G. C. (2018). A new Em-like protein from Lactuca sativa, LsEm1, enhances drought and salt stress tolerance in Escherichia coli and rice. Protoplasma 255, 1089-1106.
Xu, D., Duan, X., Wang, B., Hong, B., Ho, T. H. D., & Wu, R. (1996). Expression of a late embryogenesis abundant protein gene, HVA1, from barley confers tolerance to water deficit and salt stress in transgenic rice. Plant Physiology 110, 249-257.
Yamaguchi-Shinozaki, K., & Shinozaki, K. (2005). Organization of cis-acting regulatory elements in osmotic-and cold-stress-responsive promoters. Trends in Plant Science 10, 88-94.
Yoshida, T., Mogami, J., & Yamaguchi-Shinozaki, K. (2014). ABA-dependent and ABA-independent signaling in response to osmotic stress in plants. Current Opinion in Plant Biology 21, 133-139.
Zhang, W., Ruan, J., Ho, T.H., You, Y., Yu, T., & Quatrano, R.S. (2005). Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana. Bioinformatics 21, 3074-3081.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/74745-
dc.description.abstract在過去研究中,LEA蛋白家族被認為參與在像是乾旱、寒害、鹽分逆境或是離層素處理等的植物逆境反應中。阿拉伯芥第四群中的lea4-1/4-2雙突變株與lea4-5 單突變株被發現在鹽逆境處理下與野生型相較有較低的萌芽率。但是是否有其他第四群LEA也有參與在鹽逆境或是離層酸反應中還不是很清楚。此外,研究室先前發現ABF3會結合ABI5的啟動子並正向調控ABI5表現。另一方面,abf3突變株的DNA晶片微陣列的實驗結果顯示LEA4-3可能是ABF3的下游目標。為了探討在阿拉伯芥中ABF3和LEA4-3之間的轉錄關係與LEA4-3在鹽逆境和離層酸影響下的功能,本研究利用qPCR發現在鹽與離層酸處理下,abf3突變株中的LEA4-3基因表現與野生型相比有較低的趨勢。在染色質免疫沉澱實驗中,發現ABF3會與LEA4-3的啟動子結合。在離層酸處理中,lea4-3突變株與野生型相比有較低的萌芽率,且LEA4-3過量表現株在離層酸處理下主根根長與野生型相比也有較長的性狀,表示lea4-3突變株相較於野生型對於離層素較敏感。而在鹽處理中lea4-3突變株有較高的萌芽率,lea4-3突變株在鹽處理中主根根長與野生型相比也有較長的性狀,表示lea4-3突變株相較於野生型對於鹽逆境較不敏感。綜合上述結果,推斷LEA4-3參與在阿拉伯芥鹽逆境與離層酸反應中。zh_TW
dc.description.abstractLate embryogenesis abundant (LEA) proteins are known to be associated with stress responses in plants, such as dehydration, cold, high salinity, or abscisic acid (ABA) treatment. A previous study showed that group four lea mutants, lea 4-1/4-2 double mutant and lea 4-5 single mutant have lower germination rate in comparison to wild type in salt stress. LEA overexpression plants show tolerant phenotypes under many abiotic stresses. However, it is unclear whether other group four LEAs function during salt stress and ABA responses. On the other hand, our microarray data show that LEA4-3 might be a candidate target of ABF3. I aim to investigate the relationship between ABF3 and LEA4-3 in the transcriptional network, and the function of LEA4-3 in salt stress and ABA responses in Arabidopsis. In the abf3 mutant, LEA gene expression is lower than wild type under salt and ABA treatment. Chromatin immunoprecipitation (ChIP) analysis results showed that ABF3 binds to the promoter of LEA4-3. Phenotypic analysis of lea4-3 mutant lines displayed lower seed germination rate than wild type in ABA treatment, and the seed germination rate of the lea4-3 mutant line was higher than wild type in salt treatment. In addition, the primary root length of LEA4-3 overexpression lines was longer than WT in ABA and salt stress condition. Taken together, these reveal that LEA4-3 may participate in ABA and salt stress response in Arabidopsis.en
dc.description.provenanceMade available in DSpace on 2021-06-17T09:06:51Z (GMT). No. of bitstreams: 1
ntu-108-R05B42014-1.pdf: 3203601 bytes, checksum: fd191a28c698241477d7ec8d8382a1df (MD5)
Previous issue date: 2019
en
dc.description.tableofcontents論文口試委員會審定書 I
致謝 II
摘要 III
Abbreviation V
Contents VI
List of figures IX
Supplementary data X
Appendixes XI
1. Introduction 1
1.1 Abscisic acid 1
1.2 Seed germination 1
1.3 ABA metabolism in seed germination 2
1.4 ABA signaling in seed germination 2
1.5 Environmental stresses 3
1.6 Biotic and abiotic stresses 3
1.7 Salt stress and the impact to plants 3
1.8 Transcriptional regulatory networks in abiotic stress responses 4
1.9 ABA-dependent pathway 4
1.10 ABA-independent pathway 5
1.11 Stress-responsive transcription factors in plants 5
1.12 bZIP transcription factors 6
1.13 Abscisic acid responsive elements-binding factor 3 (ABF3) 6
1.14 Late embryogenesis abundant (LEA) protein 7
1.15 LEA protein functions 7
1.16 LEA protein in seed germination 8
1.17 LEA protein in abiotic stress response 8
1.18 Project goal 9
2 Materials and Methods 11
2.1 Plant materials 11
2.2 Growth conditions of seedlings 11
2.3 Generation of constructs 12
2.4 Arabidopsis transformation by floral dipping 12
2.5 Isolation of T-DNA insertional mutants 13
2.6 RNA extraction and gene expression analysis 13
2.7 Semi-quantitative and quantitative real-time PCR analysis 14
2.8 Phenotyping of primary root length, seed germination rate and survival rate measurement 15
2.9 Chromatin immunoprecipitation (ChIP) Assays 15
3 Results 17
3.1 Transcript level of LEA4-3 in abf3 mutant affected by salt treatment 17
3.2 LEA4-3 gene expression in abf3 mutant under ABA treatment 17
3.3 Transcript level of LEA4 family in wild type, abf3 and abi5 mutants 18
3.4 Isolation of lea4-3 T-DNA insertional mutant lines 18
3.5 Isolation of ABF3 and LEA4-3 overexpression lines 19
3.6 Seed germination rate in ABA response 19
3.7 Seed germination rate in salt stress response 20
3.8 Primary root growth in ABA response 20
3.9 The primary root growth in response to salt stress 21
3.10 Survival rate comparison under salt stress condition 22
3.11 ABF3 can bind to the promoter of LEA4-3 in vivo 22
4 Discussion 23
4.1 LEA 4-3 involves in salt stress and ABA responses 23
4.2 The LEA4-3 promoter is regulated by ABF3 binding 26
References 28
Figures 35
Supplementary data 50
Appendixes 65
dc.language.isozh-TW
dc.subject離層酸zh_TW
dc.subjectABF3zh_TW
dc.subjectLEA4-3zh_TW
dc.subject根zh_TW
dc.subject種子萌芽率zh_TW
dc.subject鹽分逆境zh_TW
dc.subjectABF3en
dc.subjectLEA4-3en
dc.subjectABAen
dc.subjectsalt stressen
dc.subjectseed germinationen
dc.subjectrooten
dc.title阿拉伯芥基因LEA4-3在鹽分逆境和離層酸反應之功能性研究zh_TW
dc.titleFunctional study of LEA4-3 in salt stress and ABA responses in Arabidopsis thalianaen
dc.typeThesis
dc.date.schoolyear108-1
dc.description.degree碩士
dc.contributor.oralexamcommittee靳宗洛(Tsung-Luo Jinn),張孟基(Men-Chi Chang),鄭萬興(Wan-Hsing Cheng),謝明勳(Ming-Hsiun Hsieh)
dc.subject.keywordABF3,LEA4-3,離層酸,鹽分逆境,種子萌芽率,根,zh_TW
dc.subject.keywordABF3,LEA4-3,ABA,salt stress,seed germination,root,en
dc.relation.page70
dc.identifier.doi10.6342/NTU201904410
dc.rights.note有償授權
dc.date.accepted2019-12-23
dc.contributor.author-college生命科學院zh_TW
dc.contributor.author-dept植物科學研究所zh_TW
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