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  1. NTU Theses and Dissertations Repository
  2. 醫學院
  3. 分子醫學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/59512
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor李芳仁(Fang-Jen Lee)
dc.contributor.authorJiun-Yi Nongen
dc.contributor.author農君怡zh_TW
dc.date.accessioned2021-06-16T09:26:10Z-
dc.date.available2020-09-12
dc.date.copyright2017-09-12
dc.date.issued2017
dc.date.submitted2017-06-05
dc.identifier.citationReference
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/59512-
dc.description.abstract背景:血管附著蛋白-1(VAP-1) 是一種在成熟脂肪細胞中強烈表現的胺氧化酶,它是可溶性蛋白質並可分泌到細胞外,而血清中VAP-1之濃度與多種疾病有相關。本研究目的是找尋調控VAP-1血中濃度之基因。
材料方法:本研究針對史丹佛大學亞太地區高血壓和胰島素阻抗性計畫(SAPPHIRe)收集的398個家庭的1,100名受試者,研究血清中VAP-1數值的數量性狀之全基因組連鎖分析。另外使用單核苷酸多態性(SNPs)進行局部相關性細定位。
結果:估算之血清VAP-1數值的遺傳度很高(h2=69%),血清VAP-1的數量性狀基因最顯著的位於第20號染色體38cM的位點上,LOD值為2.29(P=5.81×10-4),女性更為顯著(LOD: 4.11, P=6.86×10-6)。在LOD值最顯著的區域正負1之區間使用SNP進行局部相關細定位,結果顯示MACROD2(MACRO domain containing 2)基因具有強烈的關聯性,尤其是在女性(P=5.38×10-6)。將MACROD2基因之表現抑制會顯著抑制人類初級脂肪細胞中VAP-1的表現量以及其分泌到培養基中之蛋白量。剔除MACROD2也顯著抑制脂肪細胞的分化。MACROD2表現與人類內臟脂肪組織中的VAP-1表現量呈正相關。此外,VAP-1表現量也與身體質量指數,胰島素阻抗性與空腹胰島素數值的體內平衡模型呈正相關,並與高密度脂蛋白膽固醇數值呈負相關。
結論:本研究顯示MACROD2是血清VAP-1濃度的潛在的遺傳因子決定因素,機轉可能是通過調節脂肪細胞的分化而影響VAP-1之表現量。
zh_TW
dc.description.abstractBackground, Vascular adhesion protein-1 (VAP-1) is an amine oxidase that is strongly expressed in mature adipocytes and excreted as a soluble protein. Serum VAP-1 levels are associated with various diseases. The aim of this study is to identify the genetic factor that modulates expression of VAP-1.
Methods, We conducted a genome-wide linkage scan on 1,100 Han Chinese subjects from 398 families recruited in the Stanford Asian-Pacific Program for Hypertension and Insulin Resistance (SAPPHIRe) to map the quantitative trait loci (QTL) of circulating VAP-1 levels. We used additional single nucleotide polymorphisms (SNPs) association study for fine mapping.
Results, The estimated heritability of circulating VAP-1 levels is high (h2=69%). The most significant QTL for circulating VAP-1 was located at 38 cM on chromosome 20, with a maximum empirical logarithm of odds (LOD) score of 2.29 (P=5.81×10-4), especially in females (LOD: 4.11, P=6.86×10-6). Regional SNP fine mapping within 1-unit support interval showed a strongest association signal in the MACROD2 (MACRO domain containing 2) gene, especially in females (P=5.38×10-6). The knockdown of MACROD2 significantly suppresses the expression of VAP-1 in primary human adipocytes and its secretion into the culture medium. Knockdown of MACROD2 also significantly suppresses the expression of key adipogenic genes. MACROD2 expression is positively associated with VAP-1 expression in human visceral adipose tissue. In addition, the expression level of VAP-1 is also positively associated with body mass index, homeostasis model assessment of insulin resistance (HOMA-IR) and fasting insulin levels and is negatively associated with high-density lipoprotein cholesterol (HDL-C) levels.
Conclusion, Our study suggests MACROD2 is a potential genetic determinant of serumVAP-1 levels, probably through regulation of adipogenesis.
en
dc.description.provenanceMade available in DSpace on 2021-06-16T09:26:10Z (GMT). No. of bitstreams: 1
ntu-106-P04448004-1.pdf: 1080416 bytes, checksum: 2aa2be701ff3c5567645a334f92ab342 (MD5)
Previous issue date: 2017
en
dc.description.tableofcontents謝誌 i
中文摘要 ii
ABSTRACT iii
CONTENTS v
LIST OF FIGURES vi
LIST OF TABLES vii
Chapter 1 Introduction 1
Chapter 2 Methods and Materials 3
2.1 The SAPPHIRe study cohort 3
2.2 Genotyping and single nucleotide polymorphism(SNP) imputation 3
2.3 Subjects for measurement of gene expression in adipose tissue 4
2.4 Human adipocyte culture 4
2.5 Knockdown of MACROD2 in induced human adipocytes 5
2.6 Reverse transcription and quantitative real-time PCR 5
2.7 Statistical analysis 6
2.8 Linkage analysis 6
2.9 Association analysis 7
Chapter 3 Result 8
Chapter 4 Discussion 10
Chapter 5 Conclusions 12
Reference 23
dc.language.isoen
dc.subject脂肪細胞分化zh_TW
dc.subject相關分析zh_TW
dc.subject連鎖分析zh_TW
dc.subject血管附著蛋白-1zh_TW
dc.subjectMACROD2zh_TW
dc.subject脂肪細胞分化zh_TW
dc.subject相關分析zh_TW
dc.subject連鎖分析zh_TW
dc.subject血管附著蛋白-1zh_TW
dc.subjectMACROD2zh_TW
dc.subjectassociation analysisen
dc.subjectVAP-1en
dc.subjectlinkage analysisen
dc.subjectadipogenesisen
dc.subjectMACROD2en
dc.subjectVAP-1en
dc.subjectlinkage analysisen
dc.subjectassociation analysisen
dc.subjectadipogenesisen
dc.subjectMACROD2en
dc.title血清VAP-1全基因組之連鎖分析:
MACROD2 調節脂肪分化的角色
zh_TW
dc.titleA genome-wide linkage analysis for circulating
vascular adhesion protein -1 levels:
MACROD2 as a regulator of adipogenesis
en
dc.typeThesis
dc.date.schoolyear105-2
dc.description.degree碩士
dc.contributor.coadvisor莊立民(Lee-Ming Chuang)
dc.contributor.oralexamcommittee張以承(Yi-cheng Chang)
dc.subject.keyword血管附著蛋白-1,連鎖分析,相關分析,脂肪細胞分化,MACROD2,zh_TW
dc.subject.keywordVAP-1,linkage analysis,association analysis,adipogenesis,MACROD2,en
dc.relation.page28
dc.identifier.doi10.6342/NTU201700887
dc.rights.note有償授權
dc.date.accepted2017-06-06
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept分子醫學研究所zh_TW
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