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  1. NTU Theses and Dissertations Repository
  2. 生命科學院
  3. 分子與細胞生物學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/45464
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor吳益群
dc.contributor.authorJheng-Wei Huangen
dc.contributor.author黃政偉zh_TW
dc.date.accessioned2021-06-15T04:21:37Z-
dc.date.available2016-09-21
dc.date.copyright2011-09-21
dc.date.issued2011
dc.date.submitted2011-08-17
dc.identifier.citation1. Ambros, V. and H.R. Horvitz, Heterochronic mutants of the nematode Caenorhabditis elegans. Science, 1984. 226(4673): p. 409-16.
2. Antebi, A., et al., daf-12 encodes a nuclear receptor that regulates the dauer diapause and developmental age in C. elegans. Genes Dev, 2000. 14(12): p. 1512-27.
3. Ayala, R., T. Shu, and L.H. Tsai, Trekking across the brain: the journey of neuronal migration. Cell, 2007. 128(1): p. 29-43.
4. Blelloch, R. and J. Kimble, Control of organ shape by a secreted metalloprotease in the nematode Caenorhabditis elegans. Nature, 1999. 399(6736): p. 586-90.
5. Fielenbach, N., et al., DRE-1: an evolutionarily conserved F box protein that regulates C. elegans developmental age. Dev Cell, 2007. 12(3): p. 443-55.
6. Hammell, C.M., X. Karp, and V. Ambros, A feedback circuit involving let-7-family miRNAs and DAF-12 integrates environmental signals and developmental timing in Caenorhabditis elegans. Proc Natl Acad Sci U S A, 2009. 106(44): p. 18668-73.
7. Hardin, J., Development. A degrading way to make an organ. Science, 2000. 288(5474): p. 2142-3.
8. Hedgecock, E.M., J.G. Culotti, and D.H. Hall, The unc-5, unc-6, and unc-40 genes guide circumferential migrations of pioneer axons and mesodermal cells on the epidermis in C. elegans. Neuron, 1990. 4(1): p. 61-85.
9. Hedgecock, E.M., et al., Genetics of cell and axon migrations in Caenorhabditis elegans. Development, 1987. 100(3): p. 365-82.
10. Itoh, B., et al., SRC-1, a non-receptor type of protein tyrosine kinase, controls the direction of cell and growth cone migration in C. elegans. Development, 2005. 132(23): p. 5161-72.
11. Jeon, M., et al., Similarity of the C. elegans developmental timing protein LIN-42 to circadian rhythm proteins. Science, 1999. 286(5442): p. 1141-6.
12. Keller, R., Cell migration during gastrulation. Curr Opin Cell Biol, 2005. 17(5): p. 533-41.
13. Lee, M., et al., Roles for beta(pat-3) integrins in development and function of Caenorhabditis elegans muscles and gonads. J Biol Chem, 2001. 276(39): p. 36404-10.
14. Lehmann, R., Cell migration in invertebrates: clues from border and distal tip cells. Curr Opin Genet Dev, 2001. 11(4): p. 457-63.
15. Li, X., et al., Generation of destabilized green fluorescent protein as a transcription reporter. J Biol Chem, 1998. 273(52): p. 34970-5.
16. Meighan, C.M. and J.E. Schwarzbauer, Control of C. elegans hermaphrodite gonad size and shape by vab-3/Pax6-mediated regulation of integrin receptors. Genes Dev, 2007. 21(13): p. 1615-20.
17. Merz, D.C., et al., UNC-52/perlecan affects gonadal leader cell migrations in C. elegans hermaphrodites through alterations in growth factor signaling. Dev Biol, 2003. 256(1): p. 173-86.
18. Nelson, M.D., et al., A bow-tie genetic architecture for morphogenesis suggested by a genome-wide RNAi screen in Caenorhabditis elegans. PLoS Genet, 2011. 7(3): p. e1002010.
19. Nishiwaki, K., N. Hisamoto, and K. Matsumoto, A metalloprotease disintegrin that controls cell migration in Caenorhabditis elegans. Science, 2000. 288(5474): p. 2205-8.
20. Niu, W., et al., Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans. Genome Res, 2011. 21(2): p. 245-54.
21. Pratheeshkumar, P. and G. Kuttan, Andrographolide inhibits human umbilical vein endothelial cell invasion and migration by regulating MMP-2 and MMP-9 during angiogenesis. J Environ Pathol Toxicol Oncol, 2011. 30(1): p. 33-41.
22. Reddien, P.W. and H.R. Horvitz, CED-2/CrkII and CED-10/Rac control phagocytosis and cell migration in Caenorhabditis elegans. Nat Cell Biol, 2000. 2(3): p. 131-6.
23. Reidy, K. and A. Tufro, Semaphorins in kidney development and disease: modulators of ureteric bud branching, vascular morphogenesis, and podocyte-endothelial crosstalk. Pediatr Nephrol, 2011.
24. Rougvie, A.E. and V. Ambros, The heterochronic gene lin-29 encodes a zinc finger protein that controls a terminal differentiation event in Caenorhabditis elegans. Development, 1995. 121(8): p. 2491-500.
25. Su, M., et al., Regulation of the UNC-5 netrin receptor initiates the first reorientation of migrating distal tip cells in Caenorhabditis elegans. Development, 2000. 127(3): p. 585-94.
26. Tamai, K.K. and K. Nishiwaki, bHLH transcription factors regulate organ morphogenesis via activation of an ADAMTS protease in C. elegans. Dev Biol, 2007. 308(2): p. 562-71.
27. Tennessen, J.M., et al., Novel heterochronic functions of the Caenorhabditis elegans period-related protein LIN-42. Dev Biol, 2006. 289(1): p. 30-43.
28. Wadsworth, W.G., H. Bhatt, and E.M. Hedgecock, Neuroglia and pioneer neurons express UNC-6 to provide global and local netrin cues for guiding migrations in C. elegans. Neuron, 1996. 16(1): p. 35-46.
29. Wu, J.T., et al., CSN-mediated deneddylation differentially modulates Ci(155) proteolysis to promote Hedgehog signalling responses. Nat Commun, 2011. 2: p. 182.
30. Wu, Y.C. and H.R. Horvitz, C. elegans phagocytosis and cell-migration protein CED-5 is similar to human DOCK180. Nature, 1998. 392(6675): p. 501-4.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/45464-
dc.description.abstract在線蟲(Caenorhabditis elegans)的雌雄同體中,兩顆distal tip cell(DTC)會在幼蟲期進行三個時期不同方向的遷移。之前的研究發現,netrin guidance system會影響第二時期的遷移,在野生型線蟲中,netrin的受器UNC-5的表現就足以使DTC進行第二時期的遷移。另外,有三個異時基因dre-1、daf-12與lin-29也被發現會共同促進DTC第二時期的遷移。我們實驗室之前發現了一個新基因blmp-1也會影響第二時期的遷移。當blmp-1突變時,DTC會比在野生型線蟲中提早第二時期遷移。根據遺傳分析,我們認為blmp-1應在dre-1、daf-12的下游,與lin-29位於不同路徑或在其下游,並在unc-5的上游。此外,我們亦發現在dre-1、daf-12與lin-29其中兩個基因突變下,BLMP-1會持續存在,而且BLMP-1的過量表現會抑制unc-5的表現。這些資料顯示blmp-1需被dre-1、daf-12與lin-29三個異時基因向下調控,使DTC得以進行第二時期的遷移。由於此三個異時基因所轉譯出的蛋白質具有不同的功能,DRE-1是F-box protein,DAF-12是荷爾蒙受器,LIN-29是鋅指轉錄因子,我們推測blmp-1可能會在轉錄、轉錄後及轉譯後幾個階層受到向下調控。為了確認blmp-1是在何階層受到向下調控,我們將blmp-1分為三個部份結合螢光蛋白追蹤分析,分別是啟動子、3端不轉譯區以及cDNA。我們發現lin-29會在第二時期遷移後抑制blmp-1的轉錄,dre-1與daf-12則是會在mid L3降解BLMP-1。blmp-1的3端不轉譯區在blmp-1的向下調控中則是不具有功能。由此可知blmp-1會在不同時間點受到不同層次上的調控,而BLMP-1的降解,可能是DTC遷移中,由第一時期調控網絡轉移成第二時期調控網絡的重要因子。zh_TW
dc.description.abstractIn the hermaphrodite of Caenorhabditis elegans, two distal tip cells (DTCs) undergo three-phased migration during larval stages. Previous studies have shown that the netrin guidance system functions in phase II migration, and the expression of UNC-5, a receptor of netrin, is sufficient for promoting phase II migration in wild type. Three heterochronic genes, dre-1, daf-12, and lin-29, which encode F-box protein, nuclear hormone receptor, and zinc finger transcription factor respectively, have been identified to function redundantly in promoting phase II migration. A previous study in the lab has identified a novel heterochronic gene blmp-1 also regulating phase II migration. When blmp-1 is mutated, DTCs initiate phase II migration earlier at early L3 rather than late L3. In addition, genetic analyses suggest that blmp-1 acts downstream or parallel of dre-1, daf-12 and lin-29, and is down-regulated for promoting phase II migration. Therefore, my thesis focuses on dissecting the mechanisms by which dre-1, daf-12, and lin-29 regulate the expression level of blmp-1. To verify at which level blmp-1 is down-regulated, I separated the blmp-1 gene into three regions, promoter, 3’UTR, and cDNA, and then fused them with different reporter genes and assessed their expression during DTC migration. We find that reporter genes fused with promoter or cDNA region of blmp-1 show down-regulation during L4 and at mid L3 respectively, but the 3’UTR region not. Furthermore, we find that the down-regulation of reporter genes fused with promoter region of blmp-1 is abolished by lin-29 RNAi treatment, while down-regulation by cDNA region of blmp-1 is eliminated in dre-1 or daf-12 mutant. These data suggest that lin-29 suppresses the transcription of blmp-1 after phase II migration, while dre-1 and daf-12 degrade BLMP-1 at mid L3. These results imply that blmp-1 is down-regulated at different levels and times and the protein degradation might be the key point for the transition of network regulating DTC migration from phase I to phase II.en
dc.description.provenanceMade available in DSpace on 2021-06-15T04:21:37Z (GMT). No. of bitstreams: 1
ntu-100-R98b43012-1.pdf: 3357380 bytes, checksum: 35e015f5162e33aec6f4411814269017 (MD5)
Previous issue date: 2011
en
dc.description.tableofcontents口試委員審定書............................................................................................................I
致謝................................................................................................................................II
中文摘要.......................................................................................................................III
英文摘要........................................................................................................................V
Table of Contents ..........................................................................................................1
Introduction ...................................................................................................................4
Materials and Methods ..................................................................................................9
Nematode strains ......................................................................................................9
Constructs .................................................................................................................9
Transgenic worms ...................................................................................................13
RNA interference (RNAi) .......................................................................................13
Yeast one hybrid.......................................................................................................14
Results .........................................................................................................................15
blmp-1 is down-regulated by lin-29 at transcriptional level after phase II migration .................................................................................................................15
The 3’-UTR of blmp-1 may not function in the down-regulation of blmp-1...........15
BLMP-1 may be degraded before phase II migration .............................................16
DRE-1 and DAF-12 function in the degradation of BLMP-1 .................................17
Protein-DNA interaction can not be detected in yeast one hybrid ..........................17
Discussion ...................................................................................................................20
dre-1, daf-12, and lin-29 down-regulate blmp-1 at different levels to promote phase II migration. .................................................................................................................20
daf-12 may affect the ubiquitylation of BLMP-1 ....................................................22
A positive feedback of blmp-1 .................................................................................22
Possible reasons for negative results in yeast one hybrid .......................................23
Regulation mechanism in phase II migration may also affect phase III migration .24
References ………………………………………………………………………...... 25
Figures …………………………………………………………………………….....29
Fig. 1 Diagrams of DTC three-phased migration ....................................................29
Fig. 2 Transcription of blmp-1 is suppressed after late L3 ......................................30
Fig. 3 blmp-1 3’-UTR has no function in the down-regulation of blmp-1 ..............31
Fig. 4 DRE-1 and DAF-12 degrade BLMP-1 at mid L3 .........................................32
Fig. 5 LIN-29 can not bind to blmp-1 promoter through its zinc finger .................34
Fig. 6 BLMP-1 and DAF-12 do not bind to lin-29 promoter in yeast one hybrid ..35
Fig. 7 BLMP-1, LIN-29, and DAF-12 do not bind to unc-5 promoter ...................36
Fig. 8 LIN-29 does not bind to promoters of blmp-1, unc-5, and col-19 in yeast one hybrid ......................................................................................................................37
Fig. 9 LIN-29 zinc finger does not bind to col-19 promoter in yeast one hybrid ...38
Fig. 10 A model for transition from phase I migration regulation network to phase II migration regulation network ..................................................................................39
Tables ……………………………..………………………………..……………......40
Table 1 lin-29 suppresses the transcription of blmp-1 after phase II migration ......40
Table 2 lin-29 suppresses the transcription of blmp-1 after phase II migration ......41
Table 3 blmp-1 3’-UTR has no function in the down-regulation of blmp-1 ….......42
Table 4 BLMP-1 is degraded after early L3 ............................................................43
Table 5 dre-1 and daf-12 function in the degradation of BLMP-1 .........................44
dc.language.isoen
dc.titleblmp-1在線蟲遠頂細胞遷移中的異時性調控zh_TW
dc.titleHeterochronic Regulation of blmp-1 in Distal Tip Cell Migration in Caenorhabditis elegansen
dc.typeThesis
dc.date.schoolyear99-2
dc.description.degree碩士
dc.contributor.oralexamcommittee潘俊良,廖秀娟
dc.subject.keyword細胞遷移,遠頂細胞,blmp-1,lin-29,daf-12,dre-1,zh_TW
dc.subject.keywordcell migration,distal tip cell,blmp-1,lin-29,dre-1,daf-12,en
dc.relation.page44
dc.rights.note有償授權
dc.date.accepted2011-08-17
dc.contributor.author-college生命科學院zh_TW
dc.contributor.author-dept分子與細胞生物學研究所zh_TW
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