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| DC 欄位 | 值 | 語言 |
|---|---|---|
| dc.contributor.advisor | 鄧述諄(Shu-Chun Teng) | |
| dc.contributor.author | Yun-Chu Chen | en |
| dc.contributor.author | 陳韻竹 | zh_TW |
| dc.date.accessioned | 2021-06-15T00:17:53Z | - |
| dc.date.available | 2009-09-15 | |
| dc.date.copyright | 2009-09-15 | |
| dc.date.issued | 2009 | |
| dc.date.submitted | 2009-04-30 | |
| dc.identifier.citation | ATKINSON, S.P., HOARE, S.F., GLASSPOOL, R.M., & KEITH, W.N. 2005. Lack of telomerase gene expression in alternative lengthening of telomere cells is associated with chromatin remodeling of the hTR and hTERT gene promoters. Cancer Res, 65(17), 7585-7590.
BASTIN-SHANOWER, S.A., FRICKE, W.M., MULLEN, J.R., & BRILL, S.J. 2003. The mechanism of Mus81-Mms4 cleavage site selection distinguishes it from the homologous endonuclease Rad1-Rad10. Mol Cell Biol, 23(10), 3487-3496. BENNETT, R.J., & WANG, J.C. 2001. Association of yeast DNA topoisomerase III and Sgs1 DNA helicase: studies of fusion proteins. Proc Natl Acad Sci U S A, 98(20), 11108-11113. BERNSTEIN, K.A., SHOR, E., SUNJEVARIC, I., FUMASONI, M., BURGESS, R.C., FOIANI, M., BRANZEI, D., & ROTHSTEIN, R. 2009. Sgs1 function in the repair of DNA replication intermediates is separable from its role in homologous recombinational repair. EMBO J. BERTUCH, A.A., & LUNDBLAD, V. 2004. EXO1 contributes to telomere maintenance in both telomerase-proficient and telomerase-deficient Saccharomyces cerevisiae. Genetics, 166(4), 1651-1659. BJORNSTI, M.A., & WANG, J.C. 1987. Expression of yeast DNA topoisomerase I can complement a conditional-lethal DNA topoisomerase I mutation in Escherichia coli. Proc Natl Acad Sci U S A, 84(24), 8971-8975. BODDY, M.N., GAILLARD, P.H., MCDONALD, W.H., SHANAHAN, P., YATES, J.R., 3RD, & RUSSELL, P. 2001. Mus81-Eme1 are essential components of a Holliday junction resolvase. Cell, 107(4), 537-548. BOLT, E.L., & LLOYD, R.G. 2002. Substrate specificity of RusA resolvase reveals the DNA structures targeted by RuvAB and RecG in vivo. Mol Cell, 10(1), 187-198. CHAN, C.S., & TYE, B.K. 1983. Organization of DNA sequences and replication origins at yeast telomeres. Cell, 33(2), 563-573. CHEN, Q., IJPMA, A., & GREIDER, C.W. 2001. Two survivor pathways that allow growth in the absence of telomerase are generated by distinct telomere recombination events. Mol Cell Biol, 21(5), 1819-1827. CHEN, X.B., MELCHIONNA, R., DENIS, C.M., GAILLARD, P.H., BLASINA, A., VAN DE WEYER, I., BODDY, M.N., RUSSELL, P., VIALARD, J., & MCGOWAN, C.H. 2001. Human Mus81-associated endonuclease cleaves Holliday junctions in vitro. Mol Cell, 8(5), 1117-1127. COHEN, H., & SINCLAIR, D.A. 2001. Recombination-mediated lengthening of terminal telomeric repeats requires the Sgs1 DNA helicase. Proc Natl Acad Sci U S A, 98(6), 3174-3179. COUNTER, C.M., AVILION, A.A., LEFEUVRE, C.E., STEWART, N.G., GREIDER, C.W., HARLEY, C.B., & BACCHETTI, S. 1992. Telomere shortening associated with chromosome instability is arrested in immortal cells which express telomerase activity. EMBO J, 11(5), 1921-1929. DE LANGE, T. 2002. Protection of mammalian telomeres. Oncogene, 21(4), 532-540. DINARDO, S., VOELKEL, K.A., STERNGLANZ, R., REYNOLDS, A.E., & WRIGHT, A. 1982. Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes. Cell, 31(1), 43-51. DROLET, M., PHOENIX, P., MENZEL, R., MASSE, E., LIU, L.F., & CROUCH, R.J. 1995. Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I. Proc Natl Acad Sci U S A, 92(8), 3526-3530. GANGLOFF, S., DE MASSY, B., ARTHUR, L., ROTHSTEIN, R., & FABRE, F. 1999. The essential role of yeast topoisomerase III in meiosis depends on recombination. EMBO J, 18(6), 1701-1711. GANGLOFF, S., MCDONALD, J.P., BENDIXEN, C., ARTHUR, L., & ROTHSTEIN, R. 1994. The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol Cell Biol, 14(12), 8391-8398. HEYER, W.D., EHMSEN, K.T., & SOLINGER, J.A. 2003. Holliday junctions in the eukaryotic nucleus: resolution in sight? Trends Biochem Sci, 28(10), 548-557. HUANG, P., PRYDE, F.E., LESTER, D., MADDISON, R.L., BORTS, R.H., HICKSON, I.D., & LOUIS, E.J. 2001. SGS1 is required for telomere elongation in the absence of telomerase. Curr Biol, 11(2), 125-129. IRA, G., MALKOVA, A., LIBERI, G., FOIANI, M., & HABER, J.E. 2003. Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast. Cell, 115(4), 401-411. JESSOP, L., & LICHTEN, M. 2008. Mus81/Mms4 endonuclease and Sgs1 helicase collaborate to ensure proper recombination intermediate metabolism during meiosis. Mol Cell, 31(3), 313-323. JIANG, W.Q., ZHONG, Z.H., HENSON, J.D., NEUMANN, A.A., CHANG, A.C., & REDDEL, R.R. 2005. Suppression of alternative lengthening of telomeres by Sp100-mediated sequestration of the MRE11/RAD50/NBS1 complex. Mol Cell Biol, 25(7), 2708-2721. JOHNSON, F.B., MARCINIAK, R.A., MCVEY, M., STEWART, S.A., HAHN, W.C., & GUARENTE, L. 2001. The Saccharomyces cerevisiae WRN homolog Sgs1p participates in telomere maintenance in cells lacking telomerase. EMBO J, 20(4), 905-913. KALIRAMAN, V., MULLEN, J.R., FRICKE, W.M., BASTIN-SHANOWER, S.A., & BRILL, S.J. 2001. Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease. Genes Dev, 15(20), 2730-2740. KROGH, B.O., & SYMINGTON, L.S. 2004. Recombination proteins in yeast. Annu Rev Genet, 38, 233-271. LEE, J.Y., KOZAK, M., MARTIN, J.D., PENNOCK, E., & JOHNSON, F.B. 2007. Evidence that a RecQ helicase slows senescence by resolving recombining telomeres. PLoS Biol, 5(6), e160. LOAYZA, D., & DE LANGE, T. 2003. POT1 as a terminal transducer of TRF1 telomere length control. Nature, 423(6943), 1013-1018. LUNDBLAD, V., & BLACKBURN, E.H. 1993. An alternative pathway for yeast telomere maintenance rescues est1- senescence. Cell, 73(2), 347-360. MACMASTER, R., SEDELNIKOVA, S., BAKER, P.J., BOLT, E.L., LLOYD, R.G., & RAFFERTY, J.B. 2006. RusA Holliday junction resolvase: DNA complex structure--insights into selectivity and specificity. Nucleic Acids Res, 34(19), 5577-5584. MANKOURI, H.W., & HICKSON, I.D. 2007. The RecQ helicase-topoisomerase III-Rmi1 complex: a DNA structure-specific 'dissolvasome'? Trends Biochem Sci, 32(12), 538-546. MASSE, E., PHOENIX, P., & DROLET, M. 1997. DNA topoisomerases regulate R-loop formation during transcription of the rrnB operon in Escherichia coli. J Biol Chem, 272(19), 12816-12823. MCEACHERN, M.J., KRAUSKOPF, A., & BLACKBURN, E.H. 2000. Telomeres and their control. Annu Rev Genet, 34, 331-358. MULLEN, J.R., KALIRAMAN, V., & BRILL, S.J. 2000. Bipartite structure of the SGS1 DNA helicase in Saccharomyces cerevisiae. Genetics, 154(3), 1101-1114. MULLEN, J.R., KALIRAMAN, V., IBRAHIM, S.S., & BRILL, S.J. 2001. Requirement for three novel protein complexes in the absence of the Sgs1 DNA helicase in Saccharomyces cerevisiae. Genetics, 157(1), 103-118. NITTIS, T., GUITTAT, L., & STEWART, S.A. 2008. Alternative lengthening of telomeres (ALT) and chromatin: is there a connection? Biochimie, 90(1), 5-12. OH, S.D., LAO, J.P., TAYLOR, A.F., SMITH, G.R., & HUNTER, N. 2008. RecQ helicase, Sgs1, and XPF family endonuclease, Mus81-Mms4, resolve aberrant joint molecules during meiotic recombination. Mol Cell, 31(3), 324-336. OPRESKO, P.L. 2008. Telomere ResQue and preservation--roles for the Werner syndrome protein and other RecQ helicases. Mech Ageing Dev, 129(1-2), 79-90. OPRESKO, P.L., OTTERLEI, M., GRAAKJAER, J., BRUHEIM, P., DAWUT, L., KOLVRAA, S., MAY, A., SEIDMAN, M.M., & BOHR, V.A. 2004. The Werner syndrome helicase and exonuclease cooperate to resolve telomeric D loops in a manner regulated by TRF1 and TRF2. Mol Cell, 14(6), 763-774. PLANK, J.L., WU, J., & HSIEH, T.S. 2006. Topoisomerase IIIalpha and Bloom's helicase can resolve a mobile double Holliday junction substrate through convergent branch migration. Proc Natl Acad Sci U S A, 103(30), 11118-11123. PRUSS, G.J., MANES, S.H., & DRLICA, K. 1982. Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes. Cell, 31(1), 35-42. QI, H., MENZEL, R., & TSE-DINH, Y.C. 1999. Increased thermosensitivity associated with topoisomerase I deletion and promoter mutations in Escherichia coli. FEMS Microbiol Lett, 178(1), 141-146. SACK, G.H., JR. 1981. Human cell transformation by simian virus 40--a review. In Vitro, 17(1), 1-19. SHEN, C.L., HO, Y.Y., HUNG, Y.C., & CHEN, P.L. 2000. Arrhythmias during spinal anesthesia for Cesarean section. Can J Anaesth, 47(5), 393-397. TCHIRKOV, A., ROLHION, C., KEMENY, J.L., IRTHUM, B., PUGET, S., KHALIL, T., CHINOT, O., KWIATKOWSKI, F., PERISSEL, B., VAGO, P., & VERRELLE, P. 2003. Clinical implications of quantitative real-time RT-PCR analysis of hTERT gene expression in human gliomas. Br J Cancer, 88(4), 516-520. TEMIME-SMAALI, N., GUITTAT, L., WENNER, T., BAYART, E., DOUARRE, C., GOMEZ, D., GIRAUD-PANIS, M.J., LONDONO-VALLEJO, A., GILSON, E., AMOR-GUERET, M., & RIOU, J.F. 2008. Topoisomerase IIIalpha is required for normal proliferation and telomere stability in alternative lengthening of telomeres. EMBO J, 27(10), 1513-1524. TENG, S.C., CHANG, J., MCCOWAN, B., & ZAKIAN, V.A. 2000. Telomerase-independent lengthening of yeast telomeres occurs by an abrupt Rad50p-dependent, Rif-inhibited recombinational process. Mol Cell, 6(4), 947-952. TENG, S.C., & ZAKIAN, V.A. 1999. Telomere-telomere recombination is an efficient bypass pathway for telomere maintenance in Saccharomyces cerevisiae. Mol Cell Biol, 19(12), 8083-8093. TRIGUEROS, S., & ROCA, J. 2002. Failure to relax negative supercoiling of DNA is a primary cause of mitotic hyper-recombination in topoisomerase-deficient yeast cells. J Biol Chem, 277(40), 37207-37211. TSAI, H.J., HUANG, W.H., LI, T.K., TSAI, Y.L., WU, K.J., TSENG, S.F., & TENG, S.C. 2006. Involvement of topoisomerase III in telomere-telomere recombination. J Biol Chem, 281(19), 13717-13723. TSAI, Y.L., TSENG, S.F., CHANG, S.H., LIN, C.C., & TENG, S.C. 2002. Involvement of replicative polymerases, Tel1p, Mec1p, Cdc13p, and the Ku complex in telomere-telomere recombination. Mol Cell Biol, 22(16), 5679-5687. VAN STEENSEL, B., & DE LANGE, T. 1997. Control of telomere length by the human telomeric protein TRF1. Nature, 385(6618), 740-743. VAN STEENSEL, B., SMOGORZEWSKA, A., & DE LANGE, T. 1998. TRF2 protects human telomeres from end-to-end fusions. Cell, 92(3), 401-413. VIARD, T., & DE LA TOUR, C.B. 2007. Type IA topoisomerases: a simple puzzle? Biochimie, 89(4), 456-467. WALLIS, J.W., CHREBET, G., BRODSKY, G., ROLFE, M., & ROTHSTEIN, R. 1989. A hyper-recombination mutation in S. cerevisiae identifies a novel eukaryotic topoisomerase. Cell, 58(2), 409-419. WALLIS, J.W., CHREBET, G., BRODSKY, G., ROLFE, M., & ROTHSTEIN, R. 1989. A hyper-recombination mutation in S. cerevisiae identifies a novel eukaryotic topoisomerase. Cell, 58(2), 409-419. WALMSLEY, R.W., CHAN, C.S., TYE, B.K., & PETES, T.D. 1984. Unusual DNA sequences associated with the ends of yeast chromosomes. Nature, 310(5973), 157-160. WANG, J.C. 2002. Cellular roles of DNA topoisomerases: a molecular perspective. Nat Rev Mol Cell Biol, 3(6), 430-440. WEILBAECHER, R.G., & LUNDBLAD, V. 1999. Assembly and regulation of telomerase. Curr Opin Chem Biol, 3(5), 573-577. WU, G., LEE, W.H., & CHEN, P.L. 2000. NBS1 and TRF1 colocalize at promyelocytic leukemia bodies during late S/G2 phases in immortalized telomerase-negative cells. Implication of NBS1 in alternative lengthening of telomeres. J Biol Chem, 275(39), 30618-30622. WU, L., & HICKSON, I.D. 2002. The Bloom's syndrome helicase stimulates the activity of human topoisomerase IIIalpha. Nucleic Acids Res, 30(22), 4823-4829. WU, L., & HICKSON, I.D. 2002. RecQ helicases and cellular responses to DNA damage. Mutat Res, 509(1-2), 35-47. YEAGER, T.R., NEUMANN, A.A., ENGLEZOU, A., HUSCHTSCHA, L.I., NOBLE, J.R., & REDDEL, R.R. 1999. Telomerase-negative immortalized human cells contain a novel type of promyelocytic leukemia (PML) body. Cancer Res, 59(17), 4175-4179. ZAKIAN, V.A. 1996. Structure, function, and replication of Saccharomyces cerevisiae telomeres. Annu Rev Genet, 30, 141-172. | |
| dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/41389 | - |
| dc.description.abstract | 端粒 (telomere) 是真核生物染色體末端的特殊結構,能夠防止染色體末端被誤認為染色體損傷的訊息,抑制其不正常的融合及重組。最重要的是,核酸複製機制無法完整複製核酸末端,故每次細胞分裂時端粒的縮短可以做為緩衝,保持遺傳訊息的完整。人類腫瘤細胞可藉端粒酶 ( elomerase) 或端粒重組 (Alternative Lengthening of Telomeres) 維持端粒長度,達到無限複製分裂的永生化 (immortal) 境界。目前已研發可能的端粒酵素抑制劑,於是了解端粒重組機制以發展抑癌藥物為當前熱門議題。在缺乏端粒酵素的酵母菌中也有類似人類腫瘤的端粒重組機制,我們以酵母菌為模式生物,已發現酵母第三拓樸異構酶 (Top3p) 參與在此機制中。下一步,我們想了解第三拓樸異構酶在此機制中,究竟發揮的是其已被證實的解開 Holliday junction 的活性或是其微弱的解開染色體立體超螺旋結構的活性。
在人類骨癌細胞 Saos-2也有相同的現象:抑制人類 TOP3α即使端粒重組無法進行。有趣的是,TOP3α 被抑制的 Saos-2 細胞活化了端粒酶以繼續維持其端粒完整。我們試著探討這兩種端粒維持機制是如何互相轉換,探討轉換的過程中染色質是否重組 (chromatin remodeling),且有無任何訊息傳導路徑 (signal transduction pathway) 參與其中。 | zh_TW |
| dc.description.abstract | Telomere maintenance is required for chromosome stability. Telomeres are typically replicated by telomerase. In both mammalian tumors and yeast cells that lack telomerase, telomeres are maintain by an alternative (ALT) recombination mechanism. Our previous studies in S. cerevisiae have shown that Top3p, a type IA topoisomerase, together with Sgs1p, are involved in this recombination pathway. We tested whether Top3 in Sgs1-Top3p complex functions as a Holliday junction (HJ) resolvase to remove HJ intermediates, or acts as a topoismerase to relieve the tension of supercoilings within Rap1/Rif complex-protected telomeric heterochromatin. Neither HJ resolvase nor topoismerase expressed in yeast complement the function of Sgs1-Top3p complex.
As in S. cerevisiae, reduced human topoisomerase IIIα expression in Saos-2 ALT cells also showed blocked ALT pathway. More strikingly, increased telomerase expression and activity were detected. In order to find out the mechanism to turn on telomerase when ALT is blocked, we first analyzed if chromatin remodeling is involved by ChIP assay. It is possible that there is a signal transduction pathway to activate telomerase activity when ALT pathway is suppressed. We want to compare the difference of gene expression between ALT and ALT-blocked cells by the microarray approach. Howerever, we didn’t get any other ALT- blocked cell lines that also have telomerase activity by knock down topoisomerase IIIα expression. | en |
| dc.description.provenance | Made available in DSpace on 2021-06-15T00:17:53Z (GMT). No. of bitstreams: 1 ntu-98-R95445121-1.pdf: 3906517 bytes, checksum: c07103c298348ac1f00a402980a935b8 (MD5) Previous issue date: 2009 | en |
| dc.description.tableofcontents | 口試委員會審定書…………………………………………………II
中文摘要……………………………………………………………III 英文摘要……………………………………………………………IV 第一章 導論…………………………………………………………1 第二章 實驗材料……………………………………………………9 第三章 實驗方法……………………………………………………15 第四章 實驗結果……………………………………………………23 第五章 討論…………………………………………………………30 附圖……………………………………………………………………35 參考文獻………………………………………………………………51 | |
| dc.language.iso | zh-TW | |
| dc.subject | 第三拓樸異構酶 | zh_TW |
| dc.subject | 端粒重組 | zh_TW |
| dc.subject | topoisomerase | en |
| dc.subject | telomere recombination | en |
| dc.title | 第三拓樸異構酶在端粒重組過程中所扮演的角色 | zh_TW |
| dc.title | Characterize the role of TOP3 in telomere-telomere recombination | en |
| dc.type | Thesis | |
| dc.date.schoolyear | 97-2 | |
| dc.description.degree | 碩士 | |
| dc.contributor.oralexamcommittee | 李財坤(Tsai-Kun Li),林敬哲(Jing-Jer Lin) | |
| dc.subject.keyword | 端粒重組,第三拓樸異構酶, | zh_TW |
| dc.subject.keyword | telomere recombination,topoisomerase, | en |
| dc.relation.page | 56 | |
| dc.rights.note | 有償授權 | |
| dc.date.accepted | 2009-05-01 | |
| dc.contributor.author-college | 醫學院 | zh_TW |
| dc.contributor.author-dept | 微生物學研究所 | zh_TW |
| 顯示於系所單位: | 微生物學科所 | |
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