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  2. 醫學院
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請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/28844
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor呂勝春
dc.contributor.authorYao-Jen Changen
dc.contributor.author張耀仁zh_TW
dc.date.accessioned2021-06-13T00:25:31Z-
dc.date.available2007-08-08
dc.date.copyright2007-08-08
dc.date.issued2007
dc.date.submitted2007-07-26
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/28844-
dc.description.abstract先前利用蛋白質體分析篩選轉錄延伸因子FACT的交互蛋白時,發現一個鮮為人知的蛋白:AND-1。AND-1同時具有氨基端的WD40及羧基端的HMG-box區位,為一酸性核質蛋白。 現今結果指出AND-1與染色質和細胞核基質相關。AND-1特別在S phase中後期的細胞核中具有清晰的點狀分佈,此一分佈與S phase的進行有很密切的關係。進一步利用免疫染色及染色體免疫沈澱等方法,針對著絲點處結合的AND-1及其點狀分佈的構造進行研究。此外,分析其交互蛋白後證實AND-1可能與許多修剪複合體(spliceosome complex)或核糖核酸編輯酵素的關鍵因子有關。 然而, AND-1在水溶性及核基質部份的交互蛋白略顯不同,故而猜測細胞內不同區域之AND-1也許在調控或功能上各自扮演獨特的角色。利用AND-1為目標的小片段干擾核糖核酸(siRNA)進一部研究其功能上的特徵時指出,此蛋白可能與S到G2的過渡時期及染色質的組合有關。阻止AND-1的表現同時會造成細胞核的增大並增加核酸?對著絲點處α-satellite區域的活性。總和以上結果,AND-1可能為一具有多重功能的蛋白,能連結並協同轉錄、後轉錄、去氧核糖核酸複製及著絲點的形成。zh_TW
dc.description.abstractIn a previous proteomic-based screening for the interacting partners of the transcription elongator FACT, a novel protein, AND-1, was identified. AND-1 (acidic nucleoplasmic DNA-binding protein) is an acidic, nucleoplasmic protein that contains a WD40 domain at amino-terminus and a DNA-binding HMG-box at carboxy-terminus (Kohler et al, 1997). Current findings indicate that AND-1 is a chromatin and nuclear matrix-associated factor. Interestingly, AND-1 possesses a distinct punctate pattern of subnuclear localization especially in mid to late S-phase, which closely correlates with S phase progression in centromere. Further studies using immunostaining and chromatin immunoprecipitation methods pinpointed the centromeric association of AND-1 and its speckled structure. Additionally, interactomic analysis demonstrated that AND-1 might associate with many key factors of the spliceosome complex or RNA-editing enzymes. However, the interacting protein profiles seem slightly different between the soluble and nuclear matrix fractions, suggesting that subcellular pools of AND-1 may possess distinct regulatory or functional roles. Further functional characterization using AND-1 targeting siRNA revealed a possible link of this protein to S-G2 transition and heterochromatin assembling. Abrogation of AND-1 expression also led to enlarge nuclear size as well as increased nuclease accessibility of centromeric α-satellite region. Collectively, these observations imply that AND-1 may be a multifunctional protein that links and coordinates transcriptional and post-transcriptional events, DNA synthesis, as well as centromere organization.en
dc.description.provenanceMade available in DSpace on 2021-06-13T00:25:31Z (GMT). No. of bitstreams: 1
ntu-96-R94448006-1.pdf: 3354086 bytes, checksum: 50083fc3081d7a2dae28876d5ee8d588 (MD5)
Previous issue date: 2007
en
dc.description.tableofcontents致謝 I
CONTENTS II
ABBREVIATIONS 1
摘要 2
ABSTRACT 3
1. INTRODUCTION 4
2. MATERIALS AND METHODS 8
2.1 SDS-PAGE 8
Preparation of polyacrylamide gel 8
In-gel Digestion 8
2.2 Western Blot Analysis 9
2.3 Cell Culture 10
G1/S Phase Synchronization 10
2.4 DNA Transfection 11
2.5 Lentiviral Production and Infection 11
2.6 Preparation of Whole Cell Extraction 12
2.7 Nuclear Protein Extraction 12
2.8 Chromatin immunoprecipitation 13
2.9 DNase I Digestion Assay 14
2.10 Southern Blot 14
Probe preparation 14
Membrane transfer 14
Filter hybridization 15
2.11 Immunopreciptation Assay 15
Immunoprecipitation with soluble antibody 15
DSP cross-linking 16
2.12 Peptide Identification by Mass Spectrometry and Bioinformatics Analysis 16
2.13 Indirect Immunofluorescence Microscopy 17
Cell extractions for immunofluorescence 17
Antibodies used 17
3. RESULTS 18
3.1 Dynamic Subnuclear Location of AND-1 18
3.2 The Specific Speckles of AND-1 are Present at Specific Time Points of S-phase 18
3.3 Temporal Changes of AND-1 Localization in Mid to Late S-Phase 20
3.4 Centromeric localization of AND-1 20
3.5 Identification of AND-1-Interacting Proteins 22
3.6 Possible Link of AND-1 to Cell Cycle Progression 23
3.7 Enlarged Nuclear Size of the AND-1RNAi Cells 24
3.8 Putative roles of AND-1 in chromatin structure and assembly 25
4. DISCUSSION 27
The Carboxyl-terminal HMG-box is presumably responsible for the splicing factor binding. 27
EDD and AND-1: possible components of the DNA repair system? 28
Transcriptional silencing and RNA processing at the centromere 30
Concluding Remarks 32
5. REFERENCE 33
6. FIGURES 39
dc.language.isoen
dc.subject結合蛋白zh_TW
dc.subject著絲點zh_TW
dc.subject染色體zh_TW
dc.subjectAND-1en
dc.subjectDNA binding proteinen
dc.subjectcentromereen
dc.title著絲點結合蛋白:AND-1之生化及功能性分析zh_TW
dc.titleBiochemical and Functional Analysis of Centromere-binding Protein, AND-1en
dc.typeThesis
dc.date.schoolyear95-2
dc.description.degree碩士
dc.contributor.oralexamcommittee張?仁,阮麗蓉,譚賢明
dc.subject.keyword著絲點,染色體,結合蛋白,zh_TW
dc.subject.keywordAND-1,DNA binding protein,centromere,en
dc.relation.page49
dc.rights.note有償授權
dc.date.accepted2007-07-27
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept分子醫學研究所zh_TW
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