Skip navigation

DSpace

機構典藏 DSpace 系統致力於保存各式數位資料(如:文字、圖片、PDF)並使其易於取用。

點此認識 DSpace
DSpace logo
English
中文
  • 瀏覽論文
    • 校院系所
    • 出版年
    • 作者
    • 標題
    • 關鍵字
    • 指導教授
  • 搜尋 TDR
  • 授權 Q&A
    • 我的頁面
    • 接受 E-mail 通知
    • 編輯個人資料
  1. NTU Theses and Dissertations Repository
  2. 醫學院
  3. 分子醫學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/24623
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor林陽生(Young-Sun Lin)
dc.contributor.authorChi-Chih Changen
dc.contributor.author張吉智zh_TW
dc.date.accessioned2021-06-08T05:33:45Z-
dc.date.copyright2005-02-16
dc.date.issued2005
dc.date.submitted2005-02-05
dc.identifier.citationAlter, H. J., and L. B. Seeff. (2000).Recovery, persistence, and sequelae in hepatitis C virus infection: a perspective on long-term outcome. Semin. Liver Dis. 20:17-35
Boon Tin Chua, Christiane Volbracht, Kuan Onn Tan, Rong Li, Victor C. Yu & Peng Li (2003) Mitochondrial translocation of cofilin is an early step in apoptosis induction. Nature Cell Biology 5, 1083 - 1089
Barbato, G., D. O. Cicero, M. C. Nardi, C. Steinkuhler, R. Cortese, R. De Francesco, and R. Bazzo. (1999). The solution structure of the N-terminal proteinase domain of the hepatitis C virus (HCV) NS3 protein provides new insights into its activation and catalytic mechanism. J. Mol. Biol. 289:371-384
Carlier ,M.F.et al., (1997)Actin depolymerizing factor (ADF/cofilin) enhances the rate of filament turnover: implication in actin-based motility. J. Cell Biol. 136, pp. 1307–1322
Caron, and J. A. Thomson. (1996). Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide.
Cell 87:343-355
Casciola-Rosen ,L, DW Nicholson, T Chong, KR Rowan, NA Thornberry, DK Miller, and A Rosen (1996) Apopain/CPP32 cleaves proteins that are essential for cellular repair: a fundamental principle of apoptotic death. J. Exp. Med. 183: 1957-1964
Chen, H., Bernstein, B.W. & Bamburg, J.R. (2000) Regulating actin-filament dynamics in vivo. Trends Biochem. Sci. 25, 19–23.
Choo QL, Kuo G, Weiner AJ, Overby LR, Bradley DW, Houghton M. (1989) Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome. Science 244: 359–362
Cohen JC. (1999) The scientific challenge of hepatitis C. Science; 285: 26-30
Condeelis J. (2001), How is actin polymerization nucleated in vivo?. Trends Cell Biol. 11, 288–293.
Consensus Panel, National institutes of health consensus development conference statement: Management of hepatitis C: 2002–June 10-12, 2002. Hepatology 36 (2002), S3–S20.
Davis GL. (1999) Hepatitis C virus genotypes and quasispecies. Am J Med; 107: 21S-26S
de Murcia G, Menissier de Murcia J. (1994) Poly(ADP-ribose) polymerase: a molecular nick-sensor. Trends Biochem Sci 19(4): 172-6
Eric C. Hsu, Belinda Hsi, Masami Hirota-Tsuchihara, Jurgen Ruland, Cathy Iorio, Farida Sarangi, Jingyu Diao, Giovanni Migliaccio, D. Lorne Tyrrell, Norman Kneteman & Christopher D. Richardson (2003) Modified apoptotic molecule (BID) reduces hepatitis C virus infection in mice with chimeric human livers .
Nature Biotechnology 21, 519 - 525
Failla, C., Tomei, L., and De Francesco, R. (1995) Characterization of the hepatitis C virus-encoded serine proteinase: determination of proteinase-dependent polyprotein cleavage sites. J. Virol. 69, 1769-1777
Gong J. P., Traganos F. and Darzynkiewicz Z. (1994) A selective procedure for DNA extraction from apoptotic cells applicable for gel electrophoresis and flow cytometry. Anal Biochem. 218,314-9
Grakoui, A., McCourt, D. W., Wychowski, C., Feinstone, S. M., and Rice, C. M. (1993) Characterization of the hepatitis C virus-encoded serine proteinase: determination of proteinase-dependent polyprotein cleavage sites. J. Virol. 67, 2832-2843
Hayden, S.M. et al., (1993) Analysis of the interactions of actin depolymerizing factor with G- and F-actin. Biochemistry 32, 9994–10004.
Ivana Scovassi A., Marc Diederich (2004) Modulation of poly(ADP-ribosylation) in apoptotic cells. Biochem Pharmacol. 68(6):1041-7.
Jean-Michel Pawlotsky, (2004) Pathophysiology of hepatitis C virus infection and related liver disease. Trends in microbiology Vol.12 ,96-102,
Jenkins, G. M., A. Rambaut, O. G. Pybus, and E. C. Holmes. (2002). Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis.
J. Mol. E vol. 54:156-165
Kim,J.L et al(1998) Crystal structure of hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide. Structure 6, 89-100
Laurer G, Walker BD, (2001), Hepatitis C Virus Infection, N Engl J med;345;41-52
Lazebnik, Y.A., Kaufmann, S.H., Desnoyers, S., Poirier, G.G., and Earnshaw, W.C. (1994). Cleavage of poly(ADP-ribose) polymerase by proteinase with properties like ICE. Nature 371:346-347.
Lohmann V, Korner F, Koch J, Herian U, Theilmann L, Bartenschlager R. (1999) Replication of subgenomic hepatitis C virus RNAs in a hepatoma cell line. Science 285, 110-113 .
Love, R. A., H. E. Parge, J. A. Wickersham, Z. Hostomsky, N. Habuka, E. W. Moomaw, T. Adachi, and Z. Hostomska. (1996). The crystal structure of hepatitis C virus NS3 proteinase reveals a trypsin-like fold and a structural zinc binding site.
Cell 87:331-342
Ming Zhao, Ralph Weissleder (2004) Intracellular Cargo Delivery Using Tat Peptide and Derivatives . Medicinal Research Reviews, Vol. 24, No. 1, 1~12
McGough ,A et al., Cofilin changes the twist of F-actin: implications for actin filament dynamics and cellular function. J. Cell Biol. 138 (1997), 771–781.
McCoy, M. A., M. M. Senior, J. J. Gesell, L. Ramanathan, and D. F. Wyss. (2001). Solution structure and dynamics of the single-chain hepatitis C virus NS3 protease NS4A cofactor complex. J. Mol. Biol. 305:1099-1110
Nagahara, H. et al. (1998)Highly efficient transduction of full length TAT fusion proteins directly into mammalian cells: p27Kip1 mediates cell migration. Nature Med. 4, 1449-1452
Nancy A. Thornberry et al.(1997) Combinatorial Approach Defines Specificities of Members of the Caspase Family and Granzyme B. The Journal of Biological Chemistry Vol. 272, No. 29 ,17907–17911
Naotaka Shibagaki and Mark C. Udey (2002) Dendritic Cells Transduced with Protein Antigens Induce Cytotoxic Lymphocytes and Elicit Antitumor Immunity . The Journal of Immunology, 168: 2393-2401.
Nishida et al, Opposite effects of cofilin and profilin from porcine brain on rate of exchange of actin-bound adenosine 5’-triphosphate. Biochemistry 26 (1985), pp. 1160–1164.
Pawlotsky JM, McHutchison JG. (2004) Hepatitis C. Development of new drugs and clinical trials: promises and pitfalls. Summary of an AASLD hepatitis single topic conference, Chicago, IL, February 27–March 1, 2003 Hepatology 39:554-567
Poynard, T., Yuen, M. F., Ratziu, V. & Lai, C. L. (2003). Viral hepatitis C. Lancet 362, 2095–2100
Pybus Oliver G, Michael A. Charleston, Sunetra Gupta, Andrew Rambaut, Edward C. Holmes, Paul H. Harvey (2001) The Epidemic Behavior of the Hepatitis C Virus Science, Vol 292, Issue 5525, 2323-2325
Simmonds P., et al., (1993) Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region J. Gen. Virol. 74, 2391
Soldani,C and A. I. Scovassi (2002) Poly(ADP-ribose) polymerase-1 cleavage during apoptosis: An update. Apoptosis; 7: 321–328
Steinkuhler C, Urbani A, Tomei L, Biasiol G, Sardana M, Bianchi E, Pessi A, De Francesco R(1996) Activity of purified hepatitis C virus protease NS3 on peptide substrates. J Virol. Oct;70(10):6694-700
Taremi, S.S. et al. (1998) Construction, expression, and characterization of a novel fully activated recombinant single-chain hepatitis C virus protease.
Protein Sci. 7, 2143-2149.
Tewari M, Quan LT, Q’Rourke K,et al. (1995) Yama/CPP32 beta ,a mammalian homolog of CED-3,is a CrmA- inhibitable protease that cleaves the death substrate poly(ADP-ribose) polymerase. Cell 81:801-809
Vocero-Akbani, A.M., Heyden, N.V., Lissy, N.A., Ratner, L. & Dowdy, S.F. (1999) Killing HIV-infected cells by transduction with an HIV protease-activated caspase-3 protein. Nat. Med. 5, 29-33.
Wasley, A., and M. J. Alter. (2000). Epidemiology of hepatitis C: geographic differences and temporal trends. Semin. Liver Dis. 20,1-16
Wang Wenyan,Frederick C. Lahser,, MinKyung Yi, Jacquelyn Wright-Minogue, Ellen Xia, Patricia C. Weber, Stanley M. Lemon, and Bruce A. Malcolm (2004) Conserved C-Terminal Threonine of Hepatitis C Virus NS3 Regulates Autoproteolysis and Prevents Product Inhibition. Journal of Virology, Vol. 78, No. 2 , 700-709
Yan, Y., Y. Li, S. Munshi, V. Sardana, J. L. Cole, M. Sardana, C. Steinkuehler, L. Tomei, R. De Francesco, L. C. Kuo, and Z. Chen. (1998). Complex of NS3 protease and NS4A peptide of BK strain hepatitis C virus: a 2.2 A resolution structure in a hexagonal crystal form. Protein Sci. 7:837-847
Zhang R, Durkin J, Windsor WT, McNemar C, Ramanathan L, Le HV.(1997) Probing the substrate specificity of hepatitis C virus NS3 serine protease by using synthetic peptides. Journal of Virology, Vol 71, No 8, 6208-13
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/24623-
dc.description.abstract我們採用一種新的策略來發展抗C型肝炎病毒( Hepatitis C virus )的療法。針對C肝病毒的NS3蛋白酶,修改pro-apoptotic分子使它能被病毒的蛋白酶所活化,然後引起細胞凋亡(apoptosis)來清除受感染的細胞。我們選擇Cofilin 和 Caspase3為目標,然後依據病毒蛋白酶之專一性來做修飾。在Cofilin 與 Caspase3上導入各式各樣能被病毒NS3蛋白酶所辨認的胜肽序列 (NS3/4A, NS4A/4B, NS5A/5B),我們產生了許多包含這些修飾分子的質體(plasmid),然後在一個體外模擬系統中來測試它們 ─ 把含有病毒NS3蛋白酶的質體(plasmid)與修飾分子的質體一起轉殖(transfection)到293T細胞中。
那些包含NS5A/5B 或者NS4A/4B 胜肽序列之Cofilin能被病毒的NS3蛋白酶切開,然而不幸地,在處理過後它們不能在293T中引起細胞凋亡。
某些修飾過的caspase3能夠被病毒的NS3蛋白酶所活化,在運用西方墨點法(western blotting)分析蛋白表現量以及細胞凋亡的標誌之後,F88(caspase3
-NS5A/5B-88) 和 M (caspase3-modified 2)兩者脫穎而出。我們運用流式細胞技術(Flow cytometry)來定量分析它們細胞凋亡的程度,藉此探討轉殖劑量、效力強度和毒性之間的關係。分析之後,F88與M皆能有效地引發細胞凋亡,然而高劑量F88卻會出現一些毒性反應。
我們進一步於 HCV subgenomic replicon (HCV type 1b NS3-NS5B ) 中測試M (caspase3-modifed 2)的效力。它能誘導一小部分的細胞產生細胞凋亡,然而整體效果卻不夠顯著。原因主要是低落轉殖的效率或者在replicon中,只有一小部分的修飾分子被病毒蛋白酶所作用。
zh_TW
dc.description.abstractTo develop anti- Hepatitis C virus therapy, we take a new strategy through modifying the pro-apoptotic molecule which could be specific activated by virus NS3 serine protease and then eliminating infected cells by apoptosis. Cofilin and caspase3 are selected as our targets and modified according to the specificity of HVC NS3 protease. Several plasmids encoding modified Cofilin and modified Caspase3 have been generated through introducing different peptide sequence recognized by HCV NS3 protease (NS3/4A, NS4A/4B, NS5A/5B site)(figure2,3). They are further examined on in-vitro mimetic system through co-transfecting with HCV NS3 protease into 293T cell.
Some modified cofilin which carry NS5A/5B site or NS4A/4B site could be cleaved by HCV NS3/4A protease, but they failed to induce apoptosis in 293T cell after processing.
Some modified caspase3 could be activated by HCV NS3 protease and induce cell apoptosis. After analyzing the protein expression level and the apoptosis makers through western immunoblotting, two clones - F88 (caspase3-NS5A/5B-88) and M (Caspase3-modified 2) were selected as our candidates. We examined the relationship between transfection dose, potency and toxicity by quantitating the degree of apoptosis with flow cytometry. After analysis, both clone could induce apoptosis efficiently. However, F88 clone showed certain extent of toxicity with higher transfection dose.
M clone (caspase3-modifed 2) was further examined in HCV subgenomic replicon (HCV type 1b NS3-NS5B in Huh7).It induced apoptosis at small population of cells, but the apoptotic effect was not significant. The reason may be low transfection efficiency and/or low efficient cleavage by NS3/4A protease in HCV replicon.
en
dc.description.provenanceMade available in DSpace on 2021-06-08T05:33:45Z (GMT). No. of bitstreams: 1
ntu-94-R91448007-1.pdf: 2729859 bytes, checksum: 07bcd089fcdadbfcc8eac46ac2c4dd57 (MD5)
Previous issue date: 2005
en
dc.description.tableofcontentsTable of contents
中文摘要………………………………………………………………..1
Abstract………………………………………………………………..2
Introduction………………………………………………………….. .3
Materials and Methods……………………………………………... 8
Results………………………………………………………………..18
Discussion………………………………………………………….. 23
References………………………………………………………….. 26
Tables……………………………………………………………….. 30
Figures………………………………………………………………..32
dc.language.isoen
dc.subjectC型肝炎zh_TW
dc.subjectHepatitis C virusen
dc.title於C型肝炎病毒感染之細胞中使修飾過的caspase3其細胞凋亡活性最佳化之研究zh_TW
dc.titleOptimizing apoptotic activity of a modified caspase3 in cells infected by Hepatitis C virusen
dc.typeThesis
dc.date.schoolyear93-1
dc.description.degree碩士
dc.contributor.oralexamcommittee賴明陽(Ming-Yang Lai),李芳仁(Fang-Jen Lee)
dc.subject.keywordC型肝炎,zh_TW
dc.subject.keywordHepatitis C virus,en
dc.relation.page47
dc.rights.note未授權
dc.date.accepted2005-02-05
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept分子醫學研究所zh_TW
顯示於系所單位:分子醫學研究所

文件中的檔案:
檔案 大小格式 
ntu-94-1.pdf
  未授權公開取用
2.67 MBAdobe PDF
顯示文件簡單紀錄


系統中的文件,除了特別指名其著作權條款之外,均受到著作權保護,並且保留所有的權利。

社群連結
聯絡資訊
10617臺北市大安區羅斯福路四段1號
No.1 Sec.4, Roosevelt Rd., Taipei, Taiwan, R.O.C. 106
Tel: (02)33662353
Email: ntuetds@ntu.edu.tw
意見箱
相關連結
館藏目錄
國內圖書館整合查詢 MetaCat
臺大學術典藏 NTU Scholars
臺大圖書館數位典藏館
本站聲明
© NTU Library All Rights Reserved