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  1. NTU Theses and Dissertations Repository
  2. 理學院
  3. 海洋研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/23532
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor陳昭倫
dc.contributor.authorHui-Wen Tungen
dc.contributor.author董蕙文zh_TW
dc.date.accessioned2021-06-08T05:03:37Z-
dc.date.copyright2011-07-06
dc.date.issued2011
dc.date.submitted2011-03-07
dc.identifier.citationAbe M, Watanabe T, Suzuki Y, Hidaka M (2008) Genetic and morphological differentiation in the hermatypic coral Galaxea fascicularis in Okinawa, Japan. Plankton Bent Res, 3(3), 174-179.
Baker AC, Starger C, McClanahan T, Glynn PW (2004) Coral’s adaptive response to climate change. Nature, 430, 741.
Berkelmans R, van Oppen MJH (2006) The role of zooxanthellae in the thermal tolerance of corals a 'nugget of hope' for coral reefs in an era of climate change. Proc Royal Soc London B, 273, 2305-2312.
Bhagooli R, Hidaka M (2004) Photoinhibition, bleaching susceptibility and mortality in two scleractinian corals, Platygyra ryukyuensis and Stylophora pistillata, in response to thermal and light stresses. Comp Biochem Physiol A, 137, 531-539.
Brown BE (1997) Coral bleaching: causes and consequences. Coral Reefs, 16, S129-S138.
Chen CA (1999) Analysis of Scleractinian Distribution in Taiwan Indicating a Pattern
Congruent with Sea Surface Temperatures and Currents: Examples from Acropora and Faviidae Corals. Zool Studies, 38 (2), 119-129.
Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Mol Ecol, 9, 1657-1659.
Coffroth MA, Santos SR (2005) Genetic diversity of symbiotic dinoflagellates in the genus Symbiodinium. Protist, 156, 19-34.
Dai CF (1997) The status of coral reefs in Taiwan. In: Grigg RW, Birkeland C (ed) Status of Coral Reefs in the Pacific. University of Hawaii Press, Honolulu, 121-129.
Dana JD (1843) On the temperature limiting the distribution of corals. Am J Sci, 45, 130-131.
Dong ZJ, Huang H, Huang LM, Li YC, Zhou GW (2008) Molecular taxonomy and diversity of symbiotic dinoflagellates in scleractinian corals near the sea off the Dongshan Island in Fujian Province. Journal of Oceanography in Taiwan Strait, 27, 135-140.
Excoffier L, Laval G, Schneider S (2005) An integrated software package for population genetics data analysis. Evol Bioinformatics Online, 1, 47-50.
Ferrara GB, Murgia B, Parodi AM, Valisano L, Cerrano C, Palmisano G, Bavestrello G, Sara M (2006) The assessment of DNA from marine organisms via a modified salting-out protocol. Cell Mol Biol Lett, 11(2): 155-160.
Finney JC, Pettay DT, Sampayo EM, Warner ME, Oxenford HA, LaJeunesse TC (2010) The relative significance of host- habitat, depth, and geography on the ecology, endemism, and speciation of coral endosymbionts in the genus Symbiodinium. Microb Ecol, 60 (1), 250-263,
Fukami H, Budd AF, Paulay G, Sole-Cava A, Chen CA, Iwao K, Knowlton N (2004) Conventional taxonomy obscures deep divergence between Pacific and Atlantic corals. Nature, 427, 832-835.
Fukami H, Chen CA, Budd AF, Collins A, Wallace C, Chuang YY, Chen C, Dai CF, Iwao K, Sheppard C, Knowlton N. (2008) Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria). PLoS ONE, 3(9), e3222.
Glynn PW, Maté J L, Baker AC , Calderon MO (2001) Coral bleaching and mortality in Panama and Ecuador during the 1997-1998 Niño Southern Oscillation event: spatial / temporal patterns and comparisons with the 1982-1983 event. Bull Mar Sci, 69, 79-109.
Harriott VJ (1999) Coral growth in subtropical eastern Australia. Coral Reefs, 18, 281-291.
Harriott VJ, Harrison PL, Banks SA (1995) The coral communities of Lord Howe Island. Mar Fresh Res, 46, 457-465.
Harrison PL (1988) Pseudo-gynodioecy: an unusual breeding system in the scleractinian coral Galaxea fascicularis. Proc. 6th Int. Coral Reef Symp, 2, 699-705.
Hayakawa H, Andoh T, Watanabe T (2007) Identification of a novel yolk protein in the hermatypic coral Galaxea fascicularis. Zool Sci, 24, 249-255.
Hoegh-Guldberg O (1999) Climate change, coral bleaching and the future of the worlds coral reefs. Mar Freshw Res, 50, 839-866.
Hoegh-Guldberg O (2004) Coral reefs in a century of rapid environmental change. Symbiosis, 37, 1-31.
Horng S (2006) Coral communities and their spatial distributions under the impact of climate change in Taiwan. Master thesis, National Taiwan University.
Jokiel PL, Coles SL (1977) Effects of temperature on the mortality and growth of Hawaiian reef corals. Mar Biol, 43, 201-208.
Jones AM, Berkelmans R, van Oppen MJH, Mieog JC, Sinclair W (2008) A community shift in the symbionts of a scleractinian coral following a natural bleaching event: field evidence of acclimatization. Proc R Soc B, 275, 1359-1365.
Jones RJ (2008) Coral bleaching, bleaching-induced mortality, and the adaptive significance of the bleaching response. Mar Biol, 154, 65-80.
LaJeunesse TC, Bhagooli R, Hidaka M, deVantier L, Done T, Schmidt GW, Fitt WK, Hoegh-Guldberg O (2004) Closely related Symbiodinium spp. differ in relative dominance in coral reef host communities across environmental, latitudinal and biogeographic gradients. Mar Ecol Prog Ser, 284, 147-161.
LaJeunesse TC, Loh WKW, van Woesik R, Hoegh-Guldberg O, Schmidt GW, Fitt WK (2003) Low symbiont diversity in southern Great Barrier Reef corals, relative to those of the Caribbean. Limnol Oceanorg, 48, 2046-2054.
Lien Y-T, Nakano Y, Plathong S, Fukami H, Wang J-T, Chen CA (2007) Occurrence of the putatively heat-tolerant Symbiodinium phylotype D in high-latitudinal outlying coral communities. Coral Reefs, 26, 35-44.
Little AF, van Oppen MJH, Willis BL (2004) Flexibility in algal endosymbioses shapes growth in reef corals. Science, 304, 1492-1494.
Loh WKW, Loi T, Carter D, Hoegh-Guldberg O (2001) Genetic variability of the symbiotic dinoflagellates from the wide ranging coral species Seriatopora hystrix and Acropora longicyathus in the Indo-West Pacific. Mar Ecol Prog Ser, 222, 97-107.
Lopez JV, Knowlton N (1997) Discrimination of species in the Montastraea annularis complex using multiple genetic loci. Proc 8th Int Coral Reef Sym, 2, 1613-1618.
Marshall PA, Baird AH (2000) Bleaching of corals on the Great Barrier Reef: differential susceptibilities among taxa. Coral Reefs, 19, 155-163.
Mohammed TAA, Mohamed MA (2005) Some ecological factors affecting coral ref assemblages off Hurghada, Red Sea, Egypt. Egypt J Aquat Res, 31, 133-145.
Muller-Parker G, D'Elia CF (1997) Interactions between corals and their symbiotic algae. In: Birkeland C (ed) Life and Death of Coral Reefs. Chapman and Hall, NY, 96-113.
Muscatine L (1990) The role of symbiotic algae in carbon and energy flux in reef corals. Coral Reefs, 25, 75-87.
Pearse VB, Muscatine L (1971) Role of symbiotic algae (zooxanthellae) in coral calcification. Biol Bull, 141, 350-363.
Pinzón JH, LaJeunesse TC (2010) Species delimitation of common reef corals in the genus Pocillopora using nucleotide sequence phylogenies, population genetics, and symbiosis ecology. Mol Ecol, 20(2), 311-325.
Pochon X, Gates RD (2010) A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawaii. Mol Phylogenet Evol, 56, 492-497.
Pochon X, Montoya-Burgos JI, Stadelmann B, Pawlowski J (2006) Molecular phylogeny, evolutionary rates, and divergence timing of the symbiotic dinoflagellate genus Symbiodinium. Mol Phylogenet Evol, 38, 20-30.
Rowan R (1991) Molecular systematics of symbiotic algae. J Phycol, 27, 661-666.
Rowan R, Knowlton N (1995) Intraspecific diversity and ecological zonation in coral-algal symbiosis. Proc Nat Acad Sci USA, 92, 2850-2853.
Rowan R, Powers DA (1991a) A molecular genetic classification of zooxanthellae and the evolution of animal-algal symbioses. Science, 251, 1348-1350.
Rowan R, Powers DA (1991b) Molecular genetic identification of symbiotic dinoflagellates (zooxanthellae). Mar Ecol Prog Ser, 71, 65-73.
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: A laboratory manual, 2nd edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
Sampayo EM, Ridgway T, Bongaerts P, Hoegh-Guldberg O (2008) Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type. Proc Nat Acad Sci USA, 105, 10444-10449.
Santos SR, Taylor DJ, Kinzie RA, Hidaka M, Sakai K, Coffroth MA (2002) Molecular phylogeny of symbiotic dinoflagellates inferred from partial chloroplast large subunit (23S)- rDNA sequences. Mol Phylogenet Evol, 23, 97-111.
Shearer TL, van Oppen MJH, Romano SL, Wőrheide G (2002) Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria). Mol Ecol, 11, 2475-2487.
Smith RT (2008) Specificity, stability, and comparative physiology of coral- Symbiodinium mutualisms: evaluating the potential for acclimation and / or adaptation in reef corals. PhD thesis, Florida International University.
Stat M, Carter D, Hoegh-Guldberg O (2006) The evolutionary history of Symbiodinium and scleractinian hosts-symbiosis, diversity, and the effect of climate change. Plant Ecol Evol Syst, 8, 23-43.
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol, 24, 1596-1599.
Thornhill DJ, Daniel MW, LaJeunesse TC, Schmidt GW, Fitt WK (2006) Natural infections of aposymbiotic Cassiopea xamachana scyphistomae from environmental pools of Symbiodinium. J Exp Mar Biol Ecol, 338, 50-56.
Toller WW, Rowan R, Knowlton N (2001) Repopulation of zooxanthellae in the Caribbean corals Montastraea annularis and M. faveolata following experimental and disease-associated bleaching. Biol Bull, 201, 360.
Trench RK (1971) The physiology and biochemistry of zooxanthellae symbiotic with marine coelenterates. III. The effect of homogenates of host tissues on the excretion of photosynthetic products in vitro by zooxanthellae from two marine coelenterates. Proc Royal Soc London B, 177, 251-264.
Trench RK, Blank RJ (1987) Symbiodinium microadriaticum Freudenthal, S. goreauii sp. nov., S. kawagutii sp. nov. and S. pilosum sp. nov.: gymnodinioid dinoflagellate symbionts of marine invertebrates. J. Phycol, 23, 469-81.
Ulstrup KE, van Oppen MJ (2003) Geographic and habitat partitioning of genetically distinct zooxanthellae (Symbiodinium) in Acropora corals on the Great Barrier Reef. Mol Ecol, 12, 3477-3484.
Underwood JN (2009) Genetic diversity and divergence among coastal and offshore reefs in a hard coral depend on geographic discontinuity and oceanic currents. Evol Appl, 2, 222-233.
van Oppen MJH, Mahiny A, Done T (2005) Geographic distribution of zooxanthella types in three coral species on the Great Barrier Reef sampled after the 2002 bleaching event. Coral Reefs, 24, 482-487.
van Oppen MJH, Palstra FP, Piquet AT, Miller DJ (2001) Patterns of coral- dinoflagellate associations in Acropora: significance of local availability and physiology of Symbiodinium strains and host-symbiont selectivity. Proc R Soc Lond B, 268, 1759-1767.
van Oppen MJH, Willis BL, van Rheede T, Miller DJ (2002) Spawning times, reproductive compatibilities and genetic structuring in the Acropora aspera group: evidence for natural hybridization and semi-permeable species boundaries in corals. Mol Ecol, 11, 1363-1376.
Watanabe T, Nishida M, Watanabe K, Wewengkang DS, Hidaka M (2005) Polymorphism in nucleotide sequence of mitochondrial intergenic region in scleractinian coral (Galaxea fascicularis). Mar Biotechnol, 7, 33-39.
Wilkinson C, Linden O, Cesar H, Hodgson G, Rubens J, Strong AE (1999) Ecological and socioeconomic impacts of 1998 coral mortality in the Indian Ocean: An ENSO impact and a warning of future change? Ambio, 28, 188-196.
Yamazato K (1999) Coral bleaching in Okinawa, 1980 vs 1998. Galaxea, JCRS, 1, 83-87.
Yasuda N, Nagai S, Hamaguchi M, Okaji K, Gérard K, Nadaoka K (2009) Gene flow of Acanthaster planci (L.) in relation to ocean currents revealed by microsatellite analysis. Mol Ecol, 18, 1574-1590.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/23532-
dc.description.abstract北回歸線通過臺灣將之分為兩個氣候區,海流對海水表面溫度(SST)亦同樣造成影響。臺灣的珊瑚群聚分為兩大群,其分佈和水溫及海流的分佈型態相符合,本研究擬藉由叢生棘杯珊瑚(Galaxea fascicularis)探討海水表面溫度與共生藻的關係。叢生棘杯珊瑚廣泛分佈於臺灣的珊瑚礁,因此適合研究空間上的變化。本研究調查叢生棘杯珊瑚體內的共生藻群聚,在臺灣本島及周邊島嶼的海岸,分別採集兩個深度(3公尺和6公尺),以粒線體的細胞色素氧化酶基因(COI)和核的微管蛋白基因(zh_TW
dc.description.abstractThe Tropic of Cancer goes through the center of Taiwan separating it into two climate zones. Currents that pass through Taiwan also have an effect on the sea surface temperature (SST). The coral communities in Taiwan could be classified into two major clusters which congruent with SST and currents. This study was to investigate the relationship between SST and Symbiodinium communities in Galaxea fascicularis.
Galaxea fascicularis is widely distributed in the reefs of Taiwan, which is a good model for spatial variation study. Symbiodinium communities were examined in G. fascicularis at two depths (3 m and 6 m) around the coasts of Taiwan main island and the surrounding islands. The mitochondrial cytochrome oxidase I (COI) gene and nuclear
en
dc.description.provenanceMade available in DSpace on 2021-06-08T05:03:37Z (GMT). No. of bitstreams: 1
ntu-100-R97241204-1.pdf: 1177340 bytes, checksum: f23a96bc1bfe1b57fba7e779e554881a (MD5)
Previous issue date: 2011
en
dc.description.tableofcontentsAbstract in Chinese i
Abstract ii
Contents iii
Table Contents iv
Figure Contents v
Introduction 1
Materials and Methods 6
Sample collection 6
DNA extraction 6
Population genetic analysis of G. fascicularis 7
PCR- RFLP analysis of Symbiodinium clade 9
PCR- SSCP analysis of Symbiodinium subclade 10
Real-time quantitative PCR 11
Data analysis and statistical analysis 12
Results 14
Population genetic analysis of G. fascicularis 14
PCR- RFLP analysis of Symbiodinium clade 15
PCR- SSCP analysis of Symbiodinium subclade 15
Distribution of Symbiodinium in G. fascicularis around Taiwan 16
Real-time quantitative PCR 16
Discussion 18
Conclusion 23
References 24
dc.language.isoen
dc.title叢生棘杯珊瑚共生藻組成差異與海水表面溫度間之關係zh_TW
dc.titleSymbiont community differentiation in Galaxea fascicularis across the sea surface temperature boundaryen
dc.typeThesis
dc.date.schoolyear99-1
dc.description.degree碩士
dc.contributor.oralexamcommittee戴昌鳳,王志騰,陳建勳
dc.subject.keyword叢生棘杯珊瑚,共生藻,海水表面溫度,zh_TW
dc.subject.keywordGalaxea fascicularis,Symbiodinium,SST,en
dc.relation.page50
dc.rights.note未授權
dc.date.accepted2011-03-09
dc.contributor.author-college理學院zh_TW
dc.contributor.author-dept海洋研究所zh_TW
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