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  1. NTU Theses and Dissertations Repository
  2. 公共衛生學院
  3. 流行病學與預防醫學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/21567
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor杜裕康(Yu-Kang Tu)
dc.contributor.authorHan-Chu Lienen
dc.contributor.author連韓竹zh_TW
dc.date.accessioned2021-06-08T03:38:11Z-
dc.date.copyright2019-08-27
dc.date.issued2019
dc.date.submitted2019-07-18
dc.identifier.citation1. Casella G, Berger RL. Statistical inference: Duxbury Pacific Grove, CA, 2002.
2. Benford F. The Law of Anomalous Numbers. Proceedings of the American Philosophical Society 1938;78(4):551-72
3. Buyse M, George SL, Evans S, et al. The role of biostatistics in the prevention, detection and treatment of fraud in clinical trials. Statistics in Medicine 1999;18(24):3435-51 doi: 10.1002/(sici)1097-0258(19991230)18:24<3435::Aid-sim365>3.0.Co;2-o[published Online First: Epub Date]|.
4. Nuijten MB, Hartgerink CHJ, van Assen MALM, Epskamp S, Wicherts JM. The prevalence of statistical reporting errors in psychology (1985–2013). Behavior Research Methods 2016;48(4):1205-26 doi: 10.3758/s13428-015-0664-2[published Online First: Epub Date]|.
5. Carlisle JB. Data fabrication and other reasons for non-random sampling in 5087 randomised, controlled trials in anaesthetic and general medical journals. Anaesthesia 2017;72(8):944-52 doi: 10.1111/anae.13938[published Online First: Epub Date]|.
6. Carlisle JB. The analysis of 168 randomised controlled trials to test data integrity. Anaesthesia 2012;67(5):521-37 doi: 10.1111/j.1365-2044.2012.07128.x[published Online First: Epub Date]|.
7. Carlisle JB, Dexter F, Pandit JJ, Shafer SL, Yentis SM. Calculating the probability of random sampling for continuous variables in submitted or published randomised controlled trials. Anaesthesia 2015;70(7):848-58 doi: 10.1111/anae.13126[published Online First: Epub Date]|.
8. Loughin TM. A systematic comparison of methods for combining p-values from independent tests. Computational Statistics & Data Analysis 2004;47(3):467-85 doi: https://doi.org/10.1016/j.csda.2003.11.020[published Online First: Epub Date]|.
9. Dewey M. metap: meta-analysis of significance values. R package version 1.1., 2019.
10. Zaykin DV. Optimally weighted Z‐test is a powerful method for combining probabilities in meta‐analysis. Journal of Evolutionary Biology 2011;24(8):1836-41 doi: 10.1111/j.1420-9101.2011.02297.x[published Online First: Epub Date]|.
11. Becker BJ. Combining significance levels. The handbook of research synthesis. New York, NY, US: Russell Sage Foundation, 1994:215-30.
12. Edgington ES. An Additive Method for Combining Probability Values from Independent Experiments. The Journal of Psychology 1972;80(2):351-63 doi: 10.1080/00223980.1972.9924813[published Online First: Epub Date]|.
13. Edgington ES. A Normal Curve Method for Combining Probability Values from Independent Experiments. The Journal of Psychology 1972;82(1):85-89 doi: 10.1080/00223980.1972.9916971[published Online First: Epub Date]|.
14. Kharasch ED, Houle TT. Errors and Integrity in Seeking and Reporting Apparent Research Misconduct. Anesthesiology: The Journal of the American Society of Anesthesiologists 2017;127(5):733-37 doi: 10.1097/aln.0000000000001875[published Online First: Epub Date]|.
15. Mascha EJ, Vetter TR, Pittet J-F. An Appraisal of the Carlisle-Stouffer-Fisher Method for Assessing Study Data Integrity and Fraud. Anesthesia & Analgesia 2017;125(4):1381-85 doi: 10.1213/ane.0000000000002415[published Online First: Epub Date]|.
16. Bland M. Do Baseline P-Values Follow a Uniform Distribution in Randomised Trials? PLOS ONE 2013;8(10):e76010 doi: 10.1371/journal.pone.0076010[published Online First: Epub Date]|.
17. Betensky RA, Chiou SH. Correlation among baseline variables yields non-uniformity of p-values. PLOS ONE 2017;12(9):e0184531 doi: 10.1371/journal.pone.0184531[published Online First: Epub Date]|.
18. Massey FJ. The Kolmogorov-Smirnov Test for Goodness of Fit. Journal of the American Statistical Association 1951;46(253):68-78 doi: 10.1080/01621459.1951.10500769[published Online First: Epub Date]|.
19. Tu Y-K, Needleman I, Chambrone L, Lu H-K, Faggion Jr CM. A bayesian network meta-analysis on comparisons of enamel matrix derivatives, guided tissue regeneration and their combination therapies. Journal of Clinical Periodontology 2012;39(3):303-14 doi: 10.1111/j.1600-051X.2011.01844.x[published Online First: Epub Date]|.
20. Christgau M, Moder D, Wagner J, et al. Influence of autologous platelet concentrate on healing in intra-bony defects following guided tissue regeneration therapy: a randomized prospective clinical split-mouth study. Journal of Clinical Periodontology 2006;33(12):908-21 doi: 10.1111/j.1600-051X.2006.00999.x[published Online First: Epub Date]|.
21. Cortellini P, Tonetti MS, Lang NP, et al. The Simplified Papilla Preservation Flap in the Regenerative Treatment of Deep Intrabony Defects: Clinical Outcomes and Postoperative Morbidity. Journal of Periodontology 2001;72(12):1702-12 doi: 10.1902/jop.2001.72.12.1702[published Online First: Epub Date]|.
22. Döri F, Huszár T, Nikolidakis D, Arweiler NB, Gera I, Sculean A. Effect of platelet-rich plasma on the healing of intra-bony defects treated with a natural bone mineral and a collagen membrane. Journal of Clinical Periodontology 2007;34(3):254-61 doi: 10.1111/j.1600-051X.2006.01044.x[published Online First: Epub Date]|.
23. Döri F, Nikolidakis D, Húszár T, Arweiler NB, Gera I, Sculean A. Effect of platelet-rich plasma on the healing of intrabony defects treated with an enamel matrix protein derivative and a natural bone mineral. Journal of Clinical Periodontology 2008;35(1):44-50 doi: 10.1111/j.1600-051X.2007.01161.x[published Online First: Epub Date]|.
24. Guida L, Annunziata M, Belardo S, Farina R, Scabbia A, Trombelli L. Effect of Autogenous Cortical Bone Particulate in Conjunction With Enamel Matrix Derivative in the Treatment of Periodontal Intraosseous Defects. Journal of Periodontology 2007;78(2):231-38 doi: 10.1902/jop.2007.060142[published Online First: Epub Date]|.
25. Heijl L, Heden G, Svardstrom G, Ostgren A. Enamel matrix derivative (Emdogain) in the treatment of intrabony periodontal defects. Journal of Clinical Periodontology 1997;24(9):705-14 doi: 10.1111/j.1600-051X.1997.tb00253.x[published Online First: Epub Date]|.
26. Liñares A, Cortellini P, Lang NP, Suvan J, Tonetti MS, Periodontology obotERGo. Guided tissue regeneration/deproteinized bovine bone mineral or papilla preservation flaps alone for treatment of intrabony defects. II: radiographic predictors and outcomes. Journal of Clinical Periodontology 2006;33(5):351-58 doi: 10.1111/j.1600-051X.2006.00911.x[published Online First: Epub Date]|.
27. Sculean A, Pietruska M, Schwarz F, Willershausen B, Arweiler NB, Auschill TM. Healing of human intrabony defects following regenerative periodontal therapy with an enamel matrix protein derivative alone or combined with a bioactive glass. Journal of Clinical Periodontology 2005;32(1):111-17 doi: 10.1111/j.1600-051X.2004.00635.x[published Online First: Epub Date]|.
28. Zucchelli G, Amore C, Montebugnoli L, De Sanctis M. Enamel Matrix Protines Bovine Porous Bone Mineral in the Treatment of Intrabony Defects: Comparative Controlled Clinical Trial. Journal of Periodontology 2003;74(12):1725-35 doi: 10.1902/jop.2003.74.12.1725[published Online First: Epub Date]|.
29. Piraino SW. Issues in the statistical detection of data fabrication and data errors in the scientific literature: simulation study and reanalysis of Carlisle, 2017. bioRxiv 2017:179135 doi: 10.1101/179135[published Online First: Epub Date]|.
30. Bolland MJ, Gamble GD, Avenell A, Grey A. Rounding, but not randomization method, non-normality, or correlation, affected baseline P-value distributions in randomized trials. Journal of Clinical Epidemiology 2019;110:50-62 doi: https://doi.org/10.1016/j.jclinepi.2019.03.001[published Online First: Epub Date]|.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/21567-
dc.description.abstract研究背景:隨機對照試驗中的基本變項在不同治療組之間應有相似的特徵,若有違反則表示可能數據有異常。本研究主要目的是延伸Dr. Carlisle於2017年所提出的數據檢查方法,探討該方法之使用限制,並將該方法應用於網絡統合分析中隨機對照試驗數據正確性的檢查。
研究方法:本研究分為兩部分,模擬與實際資料分析。在模擬的部分,我們首先在違反方法假設的情境之下生成隨機對照試驗的數據,這些情境包含「變項之間有相關性」、「變項的母群體分布不是常態分布」,以及「摘要性統計量報告不精確」。我們檢定在這些情境下的p值分布是否為預期的均勻分布,以驗證Dr. Carlisle的數據檢查方法在這些情境下是否依舊有效。在實際資料分析的部分,我們檢查Tu (2012)發表的網絡統合分析中納入分析的所有隨機對照試驗的重要的臨床指標基本數據。
研究結果:透過模擬我們發現模擬的三種情境都會影響p值的分布,使其不再是均勻分布,以至於看到偽陽性的機會增加。變項之間的相關性會造成p值群聚的效應,隨著變項數增加會使此效應增強;非常態分布的資料也會影響p值的分布,但隨著樣本數增加,此效應會減弱;當摘要性統計量因四捨五入而報告不精確時,會使p值不再是均勻分布,此效應會隨著樣本數增加而增強。在實際資料分析中,我們發現單看附連高度的p值分布和按照試驗設計分組時,「其他試驗設計」組別的試驗變項p值分布顯著偏離均勻分布,且p值皆偏大。我們推測這是因為試驗設計本身導致不同組的變項之間會更為相近,有可能只是偽陽性、反映出此方法的使用限制,未來還需進一步探討不同試驗設計對方法的影響。
結論:Dr. Carlisle的數據檢查方法僅在變項之間彼此獨立、資料為常態,以及摘要性統計量報告精確時才有效。對於使用此方法檢查出來可能有問題的數據,需進一步確認是否有違反方法本身假設的情況,以避免錯誤解讀偽陽性的結果。
zh_TW
dc.description.abstractIntroduction: “Non-random sampling data” refers to RCT data without balanced baseline covariates between allocation groups, suggesting possible data anomalies. Recently, Carlisle (2017) proposed a screening method to detect possible non-random sampling in RCTs based on the theory that comparisons between allocation groups for baseline variables should produce a uniform distribution of p-values. However, some assumptions underlying this method is commonly violated in RCTs. The aim of the present study was to investigate the impact of violation of these assumptions on the validity of Carlisle’s method in detecting non-random sampling.
Methods: Simulations and empirical assessment were conducted to explore the effect of violating method assumptions. In simulations, hypothetical RCT data were generated under the following three assumption-violating scenarios: correlated variables, non-normality data, or imprecisely reported data. P-values were obtained from comparisons between allocation groups using t-test or ANOVA. The validity of Carlisle’s method was determined through checking the uniformity of the p-value distribution. In empirical assessment, we examined the clinically important variables of all RCTs included in network meta-analysis of Tu (2012) and discussed the limitations of applying data detection.
Results: Our simulations found inflation of type I error in all assumption-violating scenarios. The clustering effect of correlated variables was amplified when the number of variables increases. The skewed effect of non-normality data was weakened when the sample size increases, according to the central limit theorem. Imprecise report produced more similar data between groups, increasing the chance of a trial being incorrectly detected as unusual. This bias was amplified when the sample size increased. In empirical assessment, we found non-uniformly distributed p-values in CAL and in different study design groups. This result implied possible impact on baseline p-value distribution when applying different randomization designs.
Conclusions: Carlisle’s method only performs well if the data are independent, normally distributed, and reported in good precision. Otherwise, with an inflation of type I error, the method is no longer valid. For those unusual RCTs detected by Carlisle’s method, further investigation should be pursued to confirm whether those data did not come from random samples, or the finding is just a false alarm.
en
dc.description.provenanceMade available in DSpace on 2021-06-08T03:38:11Z (GMT). No. of bitstreams: 1
ntu-108-R06849012-1.pdf: 9222185 bytes, checksum: 08cb25d66c7f476189178688428f3016 (MD5)
Previous issue date: 2019
en
dc.description.tableofcontents目錄
口試委員審定書 i
誌謝 ii
中文摘要 iii
Abstract v
目錄 vii
圖片目錄 ix
表格目錄 x
第一章 前言 1
1.1 研究背景 1
1.2 研究目的 2
第二章 文獻回顧 3
2.1 數據檢查方法 3
2.2 Dr. Carlisle提出之數據檢查方法 4
2.2.1 基本原理與假設、限制 4
2.2.2 Carlisle方法執行步驟 6
2.2.3 合併p值的方法 7
2.2.4 Carlisle方法的問題討論 12
第三章 材料與方法 14
3.1 模擬情境設定 14
3.1.1 Kolmogorov-Smirnov Test (K-S檢定) 15
3.1.2 卡方適合度檢定 16
3.1.3 標準情境:未違反任何方法假設 17
3.1.4 情境一:變項之間有相關性 18
3.1.5 情境二:變項的母群體分布不是常態分布 18
3.1.6 情境三:摘要性統計量報告不精確 19
3.2 資料來源 20
3.3 資料萃取流程 20
3.4 分析方法 20
第四章 研究結果 21
4.1 模擬結果 21
4.1.1 標準情境:未違反任何方法假設 21
4.1.2 情境一:變項之間有相關性 24
4.1.3 情境二:變項的母群體分布不是常態分布 34
4.1.4 情境三:摘要性統計量報告不精確 38
4.2 分析結果 41
4.2.1 將所有變項納入分析 41
4.2.2 僅分析囊袋深度變項 42
4.2.3 僅分析附連高度變項 43
4.2.4 僅分析骨內缺損變項 44
4.2.5 按照試驗設計區分研究進行分析(所有變項) 45
第五章 討論 47
5.1 模擬結果討論 47
5.1.1 情境一:變項之間有相關性 47
5.1.2 情境二:變項的母群體分布不是常態分布 48
5.1.3 情境三:摘要性統計量報告不精確 49
5.1.4 模擬方法之限制 50
5.2 分析結果討論 50
5.2.1 檢定結果差異 50
5.2.2 分析結果統整 51
第六章 結論 52
參考文獻 53
附錄 56
附錄一 Tu(2012)網絡統合分析中51篇RCT資訊 56
附錄二 模擬部分R程式碼 64
dc.language.isozh-TW
dc.title檢查隨機對照試驗中非隨機抽樣的統計方法zh_TW
dc.titleExploring Non-random Sampling in Randomized Controlled Trialsen
dc.typeThesis
dc.date.schoolyear107-2
dc.description.degree碩士
dc.contributor.oralexamcommittee蕭朱杏(Chuhsing Kate Hsiao),陳錦華(Jin-Hua Chen)
dc.subject.keyword隨機對照試驗,資料檢查,網絡統合分析,zh_TW
dc.subject.keywordrandomized controlled trials,data detection,network meta-analysis,en
dc.relation.page66
dc.identifier.doi10.6342/NTU201901501
dc.rights.note未授權
dc.date.accepted2019-07-18
dc.contributor.author-college公共衛生學院zh_TW
dc.contributor.author-dept流行病學與預防醫學研究所zh_TW
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