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請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/16058
完整後設資料紀錄
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dc.contributor.advisor孫錦虹(Chin-Hung Sun)
dc.contributor.authorShao-Wei Huangen
dc.contributor.author黃紹維zh_TW
dc.date.accessioned2021-06-07T17:59:33Z-
dc.date.copyright2012-09-19
dc.date.issued2012
dc.date.submitted2012-08-08
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/16058-
dc.description.abstract梨形鞭毛蟲是一種腸道內原蟲寄生蟲,轉變為感染型囊體時,囊壁蛋白質(cyst wall protein, Cwp)的表現量會提高,以形成外層的囊壁,使梨形鞭毛蟲可以生存在宿主體外。Helix-turn-helix (HTH) domain是一種DNA binding domain,在原核真核生物都有發現具有此類domain的蛋白質,在不同生物中扮演調節細胞分化之轉錄調控因子的角色。我們在梨形鞭毛蟲的基因組資料庫中找到一個在C端含有HTH domain的蛋白質,將此HTH蛋白質命名為HTH1。HTH1的胺基酸序列在BLAST搜尋比對後發現相似於許多真核生物的multiprotein bridging factor1 (MBF1)。人類或果蠅等物種的MBF1都會結合轉錄活化子以活化基因的轉錄,MBF1在許多物種中可促進細胞增生與細胞分化,某些物種的MBF1在死亡時表現量增加。我們發現梨形鞭毛蟲的內生性HTH1基因表現量在mRNA與蛋白質層級上,均為囊體化時期高於滋養體時期,我們將HA-tag接在HTH1並轉染到梨形鞭毛蟲,看到外源性的HTH1也是一樣的趨勢。透過免疫螢光染色我們也發現在滋養體時期及囊體化時期,HTH1均同時表現於梨形鞭毛蟲的細胞核及細胞質中。從電泳位移分析實驗中得知HTH1具有與3種囊壁蛋白質cwp1、cwp2、cwp3基因啟動子結合的能力。在梨形鞭毛蟲大量表現HTH1時會促進Cwp1蛋白質以及cwp1~cwp3基因及其轉錄調控因子之基因myb的mRNA表現量,囊體形成數目也有上升。因此我們推測HTH1可能為參與囊體化相關基因轉錄調控的轉錄因子,並促進囊體的形成。但是若將序列上的HTH domain做不同區段的改變形成突變體則會導致此現象消失;而且當HTH domain內的第1或第2個α-helix突變後,與cwp1基因啟動子結合的能力會明顯下降,推測第1或第2個α-helix的完整性對於HTH1結合DNA的功能有很重要的關係。除此之外我們也發現HTH1和囊壁蛋白質的轉錄因子E2F1、Pax2、和WRKY結合。另外我們加入會造成梨形鞭毛蟲死亡的藥物,包括metronidazole、etoposide及curcumin時,發現HTH1的表現量皆有上升的趨勢,因此HTH1可能與細胞死亡有關。由於HTH1會調控梨形鞭毛蟲的細胞分化,在細胞死亡時表現量上升,又會與轉錄調控因子結合,我們認為梨形鞭毛蟲HTH1與MBF1可能扮演相類似的角色。zh_TW
dc.description.abstractGiardia lamblia is an intestinal protozoan parasite. When differentiating into infectious cyst, expression of cyst wall proteins (Cwp) is upregulated. These proteins form cyst wall which encapsulates G. lamblia to help the parasite to survive outside the host. Helix-turn-helix (HTH) domain is a DNA binding domain found in proteins regulating transcription of prokaryotic and eukaryotic creatures. We found a protein with an HTH domain in the C-terminus from G. lamblia genome database and denominated it HTH1. We used BLAST to search proteins with amino acid sequences similar to those of HTH1 and found that HTH1 is similar to multiprotein bridging factor1 (MBF1) from some eukaryotic species. MBF1 in species like human and fruit fly interacts with transcriptional activators to activate transcription. MBF1 promotes cell proliferation and differentiation in different species. MBF1 is upregulated during programmed cell death in some species. We found that both mRNA and protein expression levels of endogenous HTH1 gene during 24 hour encystation were higher than that during vegetative growth stage in G. lamblia. We transfected a construct expressing HA-tagged HTH1 into wild type G. lamblia. Western blot showed that HA-tagged HTH1 was expressed at similar levels during vegetative growth and during 24 hour encystation. Immunofluorescence assay revealed that the HA-tagged HTH1 was localized to the whole cell, including nuclei and cytosol, and expressed at higher protein levels during vegetative growth and encystation. Using electrophoretic mobility shift assay, we found that HTH1 binds to the promoters of cwp1, cwp2 and cwp3 genes which are important genes during encystation. Overexpressing HTH1 in G. lamblia resulted in an increase of levels of Cwp1 protein, mRNA of cwp1~cwp3 genes and a gene of their transcription factor myb, and cyst formation. Therefore we suggest that HTH1 might be involved in transcriptional activation of encystation related genes and promote cyst formation. Using mutated plasmids and transfection assays, we found that the levels of Cwp1 protein, cwp1 and cwp2 mRNA and cyst formation in the HTH1-mutant overexpressing cell line decreased significantly relative to the levels in the wild type HTH1 overexpressing cell line. Additionally, HTH1 with mutation of the first or second α-helix in the HTH domain showed a decreased binding activity to cwp1 promoter. Integrity of these 2 helices is considered important to the DNA binding activity of HTH1. Besides, we found that HTH1 binds to the transcription factors E2F1, Pax2 and WRKY in G. lamblia which regulate the expression of cyst wall proteins. While we treated G. lamblia with lethal compounds, including metronidazole, etoposide and curcumin, HTH1 expression increased. Since HTH1 regulates cell differentiation, has a higher expression level during cell death, and binds to transcription factors; we suggest that G. lamblia HTH1 might play a role similar to MBF1.en
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dc.description.tableofcontents口試委員會審定書 i
誌謝 ii
摘要 iii
Abstract v
第一章 前言 1
1.1 梨形鞭毛蟲 1
1.2 Helix-turn-helix domain 3
1.3 Multiprotein bridging factor 1 5
1.4 研究動機 6
第二章 方法與步驟 8
2.1 梨形鞭毛蟲的培養 8
2.2 質體建構 8
2.2.1 pP5’pac5n 8
2.2.2 pPHTH1 8
2.2.3 pPHTH1m1 8
2.2.4 pPHTH1m2 9
2.2.5 pPHTH1m3 10
2.2.6 pPHTH1m4 10
2.2.7 pPE2F1、pPPax2、和pPTWRKY 11
2.3 質體的轉型與萃取 11
2.3.1 質體的轉型 (transformation) 11
2.3.2 質體的萃取 11
2.4 梨形鞭毛蟲的轉染與選殖 12
2.5 重組蛋白的質體建構、表現與純化 12
2.5.1 HTH1與HTH1m1~HTH1m6的質體建構 12
2.5.2 重組蛋白質的表現與純化 15
2.6 電泳遷移分析Electric Mobility Shift Assays (EMSA) 15
2.7 免疫螢光染色 16
2.8 西方點墨法與Coomassie blue染色 16
2.8.1 西方點墨法 16
2.8.2 Coomassie blue染色 17
2.9 反轉錄聚合酶鏈式反應(RT-PCR)與即時定量反轉錄聚合酶鏈式反應(Real-time PCR) 17
2.10 囊體計數 18
2.11 免疫沉澱法 19
第三章 實驗結果 20
3.1 梨形鞭毛蟲HTH1基因序列及胺基酸序列分析 20
3.2 以RT-PCR與西方點墨法偵測滋養體時期和囊體化時期HTH1基因的表現量 21
3.3 梨形鞭毛蟲HTH1基因的表現 21
3.4 鑑定2732蛋白質與DNA結合能力 21
3.5 分析HTH1與cwp1基因啟動子的結合位置 23
3.6 分析HTH1及其突變體的表現位置與對於囊體形成的調控 24
3.7 分析HTH1與其他轉錄因子的結合能力 25
3.8 metronidazole、etoposide與curcumin三種藥物促進HTH1表現 25
第四章 討論 26
4.1 HTH1與MBF1可能扮演相類似的角色 26
4.2 梨形鞭毛蟲HTH1蛋白功能區域分析 26
4.3 鹼性胺基酸可能影響HTH1結合DNA的能力 27
4.4 梨形鞭毛蟲HTH1的表現位置 27
4.5 HTH1促進梨形鞭毛蟲進行囊體化 28
附圖 29
附表 49
參考文獻 50
dc.language.isozh-TW
dc.subjectetoposidezh_TW
dc.subject梨形鞭毛蟲zh_TW
dc.subjectHelix-turn-helix (HTH)zh_TW
dc.subjectmultiprotein bridging factor1 (MBF1)zh_TW
dc.subjectCyst wall protein 1 (Cwp1)zh_TW
dc.subjectmetronidazolezh_TW
dc.subjectetoposideen
dc.subjectGiardia lambliaen
dc.subjectHelix-turn-helix (HTH)en
dc.subjectmultiprotein bridging factor1 (MBF1)en
dc.subjectCyst wall protein 1 (Cwp1)en
dc.subjectmetronidazoleen
dc.title鑑定梨形鞭毛蟲的一個新的Helix-Turn-Helix蛋白質zh_TW
dc.titleCharacterization of a Novel Helix-Turn-Helix Protein in Giardia lambliaen
dc.typeThesis
dc.date.schoolyear100-2
dc.description.degree碩士
dc.contributor.oralexamcommittee陳佑宗(You-Tzung Chen),余明俊(Ming-Jiun Yu)
dc.subject.keyword梨形鞭毛蟲,Helix-turn-helix (HTH),multiprotein bridging factor1 (MBF1),Cyst wall protein 1 (Cwp1),metronidazole,etoposide,zh_TW
dc.subject.keywordGiardia lamblia,Helix-turn-helix (HTH),multiprotein bridging factor1 (MBF1),Cyst wall protein 1 (Cwp1),metronidazole,etoposide,en
dc.relation.page58
dc.rights.note未授權
dc.date.accepted2012-08-08
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept微生物學研究所zh_TW
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