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  1. NTU Theses and Dissertations Repository
  2. 理學院
  3. 化學系
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/61819
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor鄭原忠(Yuan-Chung Cheng)
dc.contributor.authorHung-Hsuan Linen
dc.contributor.author林紘玄zh_TW
dc.date.accessioned2021-06-16T13:14:27Z-
dc.date.available2016-07-31
dc.date.copyright2013-07-31
dc.date.issued2013
dc.date.submitted2013-07-30
dc.identifier.citation[1] Robert E. Blankenship. Molecular Mechanisms of Photosynthesis. Blackwell Sci- ence, Oxford, 2002.
[2] Gregory D. Scholes, Tihana Mirkovic, Daniel B. Turner, Francesca Fassioli, and Andreas Buchleitner. Solar Light Harvesting by Energy Transfer: from Ecology to Coherence. Energy Environ. Sci., 5:9374, 2012.
[3] Herbert V. Amerongen, Leonas Valkunas, and Rienk V. Grondelle. Photosynthetic Excitons. World Scientific, Sigapore, 2000.
[4] Jan A. Leegwater. Coherent versus Incoherent Enerygy Tranfer and Trapping in Photosynthetic Antenna Complexex. J. Phys. Chem., 100:14403, 2011.
[5] Gregory D. Scholes, Graham R. Fleming, Alexandra Olaya-Castro, and Rienk van Grondelle. Lessons from Nature about Solar Light Harvesting. Nat. Chem., 3:763, 2011.
[6] Frank C. Spano. The Spectral Signatures of Frenkel Polarons in H- and J- Aggregates. Acc. Chem. Res., 43:429, 2009.
[7] Gabriela S. Schlau-Cohen and Graham R. Fleming. Structure, Dynamics, and Func- tion in the Major Light-Harvesting Complex of Photosystem II. Aust. J. Chem., 65:583, 2012.
[8] Gregory S. Engel, Tessa R. Calhoun, Tae-Kyu Ahn Elizabeth L. Read, Toma ́sˇ Mancˇal, Yuan-Chung Cheng, Robert E. Blankenship, and Granham R. Fleming. Evidence for Wavelike Energy Transfer Thorough Quantum Coherence in Photo- synthetic Systems. Nature, 446:782, 2007.
[9] Gabriela S. Schlau-Cohen, Akihito Ishizaki, Tessa R. Chalhoun, Naomi S. Gins- berg, Matteo Ballottari, Roberto Bassi, and Granham R. Fleming. Elucidation of the timescales and origins of quantum electronic coherence in LHCII. Nature, 4:389, 2012.
[10] Niklas Christensson, Franz Milota, Jennifer A. Hauer, Joseph Sperling, Oliver Bixner, Attila L. Ne ́meth, and Harald F. Kauffmann. High Frequency Vibrational Modulations in Two-Dimensional Electronic Spetra and Their Resemblance to Elec- tronic Coherence Signatures. J. Phys. Chem. B, 115:5383, 2011.
[11] Sergey Polyutov, Oliver Kuhn, and Tonu Pullerits. Exciton-Vibrational Coupling in Molecular Aggregates: Electronic versus Vibronic Dimer. Chem. Phys., 394:21, 2012.
[12] Jordan M. Womick and Andrew M. Moran. Vibronic Enhancement of Exciton Sizes and Energy Transport in Photosynthetic Complexes. J. Phys. Chem. B, 115:1347, 2011.
[13] Daniel B. Turner, Krystyna E. Wilk, Paul M. G. Curmi, and Gregory D. Sc- holes. Comparision of Electronic and Vibrational Coherence Measured by Two- Dimensional Electronic Spectroscopy. J. Phys. Chem. Lett, 2:1904, 2011.
[14] Yuan-Chung Cheng and Graham R. Fleming. Coherence Quantum Beats in Two- Dimensional Electronic Spectroscopy. J. Phys. Chem. A, 112:4254, 2008.
[15] Tessa R. Calhoun, Naomi S. Ginsberg, Gabriela S. Schlau-Cohen, Yuan-Chung Cheng, Matteo Ballottari, Roberto Bassi, and Graham R. Fleming. Quantum Coher- ence Enabled Determination of the Energy Landscape in Light-Harvesting Complex II. J. Phys. Chem. B, 113:16291, 2009.
[16] Dassia Egorova. Detection of Electronic and Vibrational Coherences in Molecular Systems by 2D Electronic Photon Echo Spectroscopy. Chem. Phys., 347:166, 2008.
[17] Akihito Ishizaki and Graham R. Fleming. On the Interpretation of Quantum Coher- ent Beats Observed in Two-Dimensional Electronic Spectra of Photosynthetic Light Harvesting Complexes. J. Chem. Phys. B, 115:6227, 2011.
[18] Alex W. Chin, Javier Prior, Robert Rosenbach, Felipe Caycedo-Soler, Susana F. Huelga, and Martin B. Plenio. The Role of Non-equilibrium Vibrational Struc- tures in Electronic Coherence and Recoherence in Pigment-Protein Complexes. Nat. Phys., 9:113, 2013.
[19] Javier Prior, Alex W. Chin, Susana F. Huelga, and Martin B. Plenio. Efficient Sim- ulation of Strong System-Environment Interactions. Phys. Rev. Lett., 105:050404, 2010.
[20]AlexW.Chin,A ́ngelRivas,SusanaF.Huelga,andMartinB.Plenio.ExactMap- ping between System-Reservoir Quantum Models and Semi-Infinite Discrete Chains Using Orthogonal Polynomials. J. Math. Phys., 51:092109, 2010.
[21] LeonardoA.Pacho ́nandPaulBrumer.PhysicalBasisforLong-LivedElectronicCo- herence in Photosynthetic Light-Harvesting Systems. J. Phys. Chem. Lett., 2:2728, 2011.
[22] Christoph Kreisbeck and Tobias Kramer. Long-Lived Electronic Coherence in Dis- sipative Exciton Dynamics of Light-Harvesting Complexes. J. Phys. Chem. Lett., 3:2828, 2012.
[23] Toma ́sˇ Mancˇal and Leonas Valkunas. Exciton Dynamics in Photosynthetic Com- plexes: Excitation by Coherent and Incoherent Light. New J. Phys., 12:065044, 2010.
[24] Yuan-Chung Cheng and Graham R. Fleming. Dynamics of Light Harvesting in Photosynthesis. Annu. Rev. Phys. Chem, 60:241, 2009.
[25] Francesca Fassioli, Alexandra Olaya-Castro, and Gregory D. Scholes. Coherent Energy Transfer Under Incoherent Light Conditions. J. Phys. Chem. Lett., 3:3236, 2012.
[26] Paul Brumer and Moshe Shapiro. Molecular Response in One-Photon Absorp- tion via Natural Thermal Light vs. Pulsed Laser Excitation. Proc. Natl Acad. Sci., 109:19575, 2012.
[27] Jeffrey A. Cina and Graham R. Fleming. Vibrational Coherence Transfer and Trap- ping as Sources for Long-Lived Quantum Beats in Polarized Emission from Energy Transfer Complexes. J. Phys. Chem. A, 108:11196, 2004.
[28] Shaul Mukamel. Principles of Nonliear Optical Spectroscopy. Oxford University Press, New York, 1995.
[29] Tobias Brixner, Jens Stenger, Harsha M. Vaswani, Minhaeng Cho, Robert E. Blankenship, and Graham R. Fleming. Two-Dimensional Spectroscopy of Elec- tronic Couplings in Photosynthesis. Nature, 434:625, 2005.
[30] Minhaeng Cho and Graham R. Fleming. The Integrated Photon Echo and Solvation Dynamics. II. Peak Shifts and Two-Dimensional Photon Echo of a Coupled Chro- mophore System. J. Chem. Phys., 123:114506, 2005.
[31] Minhaeng Cho, Tobias Brixner, Igor Stiopkin, Harsha Vaswani, and Graham R. Fleming. Two Dimensional Electronic Spectroscopy of Molecular Complexes. J. Chin, Chem. Soc., 53:15, 2006.
[32] Sarah M. Gallagher Faeder and David M. Jonas. Two-Dimensional Electronic Cor- relation and Relaxation Spectra: Theory and Model Calculations. J. Phys. Chem. A, 103:10489, 1999.
[33] Gabriela S. Schlau-Cohen, Akihito Ishizaki, and Graham R. Fleming. Two- Dimensional Electronic Spectroscopy and Photosynthesis: Fundamentals and Ap- plications to Photosynthetic Light-Harvesting. Chem. Phys., 386:1, 2011.
[34] Darius Abramavicius, Leonas Valkunas, and Shaul Mukamel. Transport and Corre- lated Fluctuations in the Nonlinear Optical Response of Excitons. Europhys. Lett., 80:17005, 2007.
[35] Yuan-Chung Cheng, Hohjai Lee, and Graham R. Fleming. Efficient Simulation of Three-Pulse Photon-Echo Signals with Application to the Determination of Elec- tronic Coulping in a Bacterial Photosynthetic Reaction Center. J. Phys. Chem. A, 111:9499, 2007.
[36] DassiaEgorova,MichaelThoss,WolfgangDomcke,andHaobinWang.Modelingof Ultra Electron-Transfer Process: Validity of Multolevel Redfiled Theory. J. Chem. Phys., 119:2761–2773, 2003.
[37] Maxim F. Gelin, Dassia Egorova, and Wolfgang Domcke. Efficient Method for the Calculation of Time- and Frequency-Resolved Four-Wave Mixing Signals and Its Application to Photon-Echo Spectroscopy. J. Chem. Phys., 123:164112, 2005.
[38] Maxim F. Gelin, Dassia Egorova, and Wolfgang Domcke. Efficient Calculation of Time- and Frequency-Resolved Four-Wave-Mixing Signals. Acc. Chem. Res., 42:1290, 2009.
[39] Heinz Peter Breuer and Francesco Petruccione. The Theory of Open Quantum Sys- tems. Oxford University Press, Oxford, 2002.
[40] Yuan-Chung Cheng and Robert J. Silbey. Markovian Approximation in the Relax- ation of Open Quantum Systems. J. Phys. Chem. B, 109:21399, 2005.
[41] Heinz-PeterBreuer.Non-MarkovianGeneralizationoftheLindbladTheoryofOpen
Quantum Systems. Phys. Rev. A, 75:022103, 2007.
[42] Christoph Meier and David J. Tannor. Non-Markovian Evolution of the Density Operator in the Presence of Strong Laser Fields. J. Chem. Phys., 111:3365, 1999.
[43] Dassia Egorova, Maxim F. Gelin, and Wolfgang Domcke. Analysis of Cross Peaks in Two-Dimensional Electronic Photon-Echo Spectroscopy for Simple Models with Vibrationas and Dissipation. J. Chem. Phys., 126:074314, 2007.
[44] Leah Z. Sharp, Dassia Egorova, and Wolfgang Domcke. Efficient and Accu- rate Simulations of Two-Dimensional Electronic Photon-Echo Signals: Illustration for a Simple Model of the Fenna–Matthews–Olson Complex. J. Chem. Phys., 132:014501, 2010.
[45] Ulrich Weiss. Quantum Dissipative Systems. World Scientific, Singapore, 2002.
[46] Ulrich Kleinekathofer. Non-Markovian Theories Based on a Decomposition of the Special Density. J. Chem. Phys., 121:2505, 2004.
[47] Toma ́sˇ Mancˇal ad Andrei V. Pisliakov and Gramham R. Fleming. Two-dimensional Optical Three-Pulse Photon Echo Spectroscopy. I. Nonperturbative Approach to the Aalculation of Spectra. J. Chem. Phys., 124:234504, 2006.
[48] Alexander Schubert and Volker Engel. Two-Dimensional Vibronic Spectroscopy of Coherent Wave-Packet Motion. J. Chem. Phys., 134:104304, 2011.
[49] Jordan M. Womick, Brantley A. West, Norbert F. Scherer, and Andrew M. Moran. Vibronic Effects in the Spectroscopy and Dynamics of C-Phycocyanin. J. Phys. B, 45:154016, 2012.
[50] Gitt Panitchayangkoon, Dmitri V. Voronine, Darius Abramavicius, Justin R. Caram, Nicholeas H. C. Lewis, Shaul Mukamel, and Gregory S. Engel. Direct Evidence of Quantum Traport in Photosynthetic Light-Harvesting Complexes. Proc. Natl. Acas Sci., 108:20908, 2011.
[51] Toma ́sˇ Mancˇal, Niklas Christensson, Vladimir Lukesˇ, Franz Milota, Oliver Bixner, Harald F. Kauffmann, and Jurgen Hauer. System-Dependent Signatures of Elec- tronic and Vibrational Coherence in Electronic Two-Dimensional Spectra. J. Phys. Chem. Lett., 3:1497, 2012.
[52] George C. Schatz and Mark A. Ratner. Quantum Mechanics in Chemistry. Dover Publications, Singapore, 2002.
[53] Markus Wendling, Tonu Pullerits, Milosz A. Przyjalgowski, Simone I. E. Vulto, Thijs J. Aartsma, Rienk van Grondelle, and Herbert van Amerongen. Electron- Vibrational Coupling in the Fenna-Matthews-Olson Complex of Prosthecochlo- ris aestuarii Determined by Temperature-Dependent Absorption and Fluorescence Line-Narrowing Measurements. J. Phys. Chem. B, 104:5825, 2000.
[54] Kenley M. Pelzer, Graham B. Griffin, Stephen K. Gray, and Gregory S. Engel. In- homogeneous Dephasing Masks Coherence Lifetimes in Ensemble Measurements. J. Chem. Phys., 136:4704591, 2012.
[55] Vivek Tiwari, William K. Peters, and David M. Jonas. Electronic Resonance with Anticorrelated Pigment Vibrations Drives Photosynthetic Energy Transfer Outside the Adiabatic Framework. Proc. Natl. Acas Sci., 110:1203, 2013.
[56] Vytautas Butkus, Donatas Zigmantas, Leonas Valkunas, and Darius Abramavicius. Vibrational vs. Electronic Coherence in 2D Spectrum of Molecular Systems. Chem. Phys. Lett., 545:40, 2012.
[57] Vytautas Butkus, Leonas Valkunas, and Darius Abramavicius. Molecular Vibration- Induced Quantum Beats in Two-Dimensional Electronic Spectroscopy. J. Chem. Phys., 137:044513, 2012.
[58] Thomas Meier, Vladimir Chernyak, and Shual Mukamel. On the Theory of Relax- ation Processes. J. Chem. Phys,, 107:8759, 1997.
[59] Oliver Ku ̈hn and Stefan Lochbrunnera. Quantum Dynamics and Spectroscopy of Excitons in Molecular Aggregates. Semicond. and Semimetals, 85:47, 2011.
[60] Martin Aeschlimann, Tobias Brixner, Alexander Fischer, Christian Kramer, Pas- cal Melchior, Walter Pfeiffer, Christian Schneider, Christian Struber, Philip Tuch- scherer, and Dmitri V. Voronine. Coherent Two-Dimensional Nanoscopy. Science, 333:1723, 2011.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/61819-
dc.description.abstract經過數十億年的演化,行光合作用的生物體(photosynthetic organism)已經 發展出精密的光捕獲系統 (light-harvesting system) 。這些系統可以有效率地捕捉光 能並將光能轉移到反應中心 (reaction centre)。近年來,科學家發展出二維電子光 譜(two-dimensional electronic spectroscopy)的技術,用以研究並瞭解光合作用系 統中的能量轉移的機制。在本論文中,吾人透過理論計算的方法去研究二維電子 光譜中量子拍(quantum beat)的現象,並檢驗如何辨別二維電子光譜中電子相干 性(electronic coherence)和振動相干性(vibrational coherence)。本研究工作發 現二維電子光譜可提供比過去認為更多的資訊並讓我們能更進一步瞭解光合作用 中能力轉移的機制。zh_TW
dc.description.abstractOver billions of years, photosynthetic organisms have developed sophistic light-harvesting systems. These systems can efficiently capture solar energy and then transmit the energy to reaction centre with high quantum yield. We can learn about the mechanism of en- ergy transfer through two-dimensional (2D) electronic spectroscopy. So far, it is believed that the efficient energy transfer is related to quantum coherence. In this work, We study the coherence quantum beats in 2D electronic spectroscopy calculated by a theoretical method based on a time-nonlocal quantum master equation and a scheme for the evalua- tion of the third-order photon echo polarization. We aim to examine how electronic and vibrational coherence can be distinguished in 2D spectra. We do find unique characteris- tics of vibrational coherence that help us distinguish electronic and vibrational coherence. In this work we find that two-dimensional electronic spectroscopy provide more informa- tion and more understand the mechanism of energy transfer in photosynthetic organisms.en
dc.description.provenanceMade available in DSpace on 2021-06-16T13:14:27Z (GMT). No. of bitstreams: 1
ntu-102-R00223163-1.pdf: 10970378 bytes, checksum: 75fa59266b2e12a98634d24bf1c4b569 (MD5)
Previous issue date: 2013
en
dc.description.tableofcontents誌謝 i
中文摘要 iii
英文摘要 iv
1 Introduction 1
1.1 PhotosyntheticExcitationEnergyTransfer . . . . . . . . . . . . . . . . . 1
1.2 Two-DimensionalElectronicSpectroscopy. . . . . . . . . . . . . . . . . 6
2 Theoretical Background 13
2.1 Introduction................................. 13
2.2 Perturbative Evaluation of the Third-Order Polarization . . . . . . . . . . 15
2.3 Non-Markovian Evolution in the Presence of Laser Field . . . . . . . . . 18
2.4 TheTreatmentofVibrationalStates .................... 21
3 Vibrational Coherence of Monomer in 2D Spectrum 25
3.1 Model.................................... 25
3.2 VibronicLieshapein2DES......................... 30
3.3 TheeffectofHuang-Rhysfactors...................... 32
3.4 Theeffectofstrengthofsystem-bathcoupling . . . . . . . . . . . . . . . 32
3.5 Characteristicsofquantumbeats ...................... 33
4 Mixing Electronic-Vibrational Coherence of in 2D Spectra 47
4.1 DimerModel ................................ 47
4.2 Theeffectofelectroniccoupling ...................... 50
4.3 Thecharacteristicsofquantumbeats.................... 51
5 Conclusion 59
dc.language.isoen
dc.subject光譜學zh_TW
dc.subject動力學zh_TW
dc.subjectKineticsen
dc.subjectSpectroscopyen
dc.title二維電子光譜中訊號振盪之理論研究: 電子相干性或是振動相干性zh_TW
dc.titleOrigin of Quantum Beats in 2D Electronic Spectroscopy: Electronic versus Vibrational Coherencesen
dc.typeThesis
dc.date.schoolyear101-2
dc.description.degree碩士
dc.contributor.oralexamcommittee金必耀(Bih-Yaw Jin),朱立岡(Li-Kang Chu)
dc.subject.keyword動力學,光譜學,zh_TW
dc.subject.keywordKinetics,Spectroscopy,en
dc.relation.page71
dc.rights.note有償授權
dc.date.accepted2013-07-30
dc.contributor.author-college理學院zh_TW
dc.contributor.author-dept化學研究所zh_TW
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