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  1. NTU Theses and Dissertations Repository
  2. 生命科學院
  3. 分子與細胞生物學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/56546
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor吳益群(Yi-Chun Wu)
dc.contributor.authorYi-Yin Chenen
dc.contributor.author陳羿吟zh_TW
dc.date.accessioned2021-06-16T05:34:08Z-
dc.date.available2024-12-31
dc.date.copyright2014-08-17
dc.date.issued2014
dc.date.submitted2014-08-13
dc.identifier.citation1. Brenner, S. (1974). The genetics of Caenorhabditis elegans. Genetics 77, 71-94.
2. Chisholm, A.D., and Hardin, J. (2005). Epidermal morphogenesis. WormBook : the online review of C elegans biology, 1-22.
3. Florence Solari, A.B.a.J.A. (1999). The Caenorhabditis elegans genes egl-27 and egr-1 are similar to MTA1, a member of a chromatin regulatory complex, and are redundantly required for embryonic patterning. Development 126, 2483-2494.
4. Frank, C.A., Baum, P.D., and Garriga, G. (2003). HLH-14 is a C. elegans achaete-scute protein that promotes neurogenesis through asymmetric cell division. Development 130, 6507-6518.
5. Hao, L., Acar, S., Evans, J., Ou, G., and Scholey, J.M. (2009). Analysis of intraflagellar transport in C. elegans sensory cilia. Methods in cell biology 93, 235-266.
6. Hirokawa, N., Noda, Y., Tanaka, Y., and Niwa, S. (2009). Kinesin superfamily motor proteins and intracellular transport. Nature reviews Molecular cell biology 10, 682-696.
7. Hresko, M.C., Schriefer, L.A., Shrimankar, P., and Waterston, R.H. (1999). Myotactin, a novel hypodermal protein involved in muscle-cell adhesion in Caenorhabditis elegans. The Journal of cell biology 146, 659-672.
8. Hresko, M.C., Williams, B.D., and Waterston, R.H. (1994). Assembly of body wall muscle and muscle cell attachment structures in Caenorhabditis elegans. The Journal of cell biology 124, 491-506.
9. Johnstone, I.L., and Barry, J.D. (1996). Temporal reiteration of a precise gene expression pattern during nematode development. The EMBO journal 15, 3633-3639.
10. Khan, M.L., Ali, M.Y., Siddiqui, Z.K., Shakir, M.A., Ohnishi, H., Nishikawa, K., and Siddiqui, S.S. (2000). C. elegans KLP-11/OSM-3/KAP-1: orthologs of the sea urchin kinesin-II, and mouse KIF3A/KIFB/KAP3 kinesin complexes. DNA research : an international journal for rapid publication of reports on genes and genomes 7, 121-125.
11. Krause, M., and Liu, J. (2012). Somatic muscle specification during embryonic and post-embryonic development in the nematode C. elegans. Wiley interdisciplinary reviews Developmental biology 1, 203-214.
12. Pocock, R., Ahringer, J., Mitsch, M., Maxwell, S., and Woollard, A. (2004). A regulatory network of T-box genes and the even-skipped homologue vab-7 controls patterning and morphogenesis in C. elegans. Development 131, 2373-2385.
13. Scholey, J.M. (2008). Intraflagellar transport motors in cilia: moving along the cell's antenna. The Journal of cell biology 180, 23-29.
14. Scholey, J.M. (2012). Kinesin-2 motors transport IFT-particles, dyneins and tubulin subunits to the tips of Caenorhabditis elegans sensory cilia: relevance to vision research? Vision research 75, 44-52.
15. Scholey, J.M. (2013). Kinesin-2: a family of heterotrimeric and homodimeric motors with diverse intracellular transport functions. Annual review of cell and developmental biology 29, 443-469.
16. Scholey, J.M., Ou, G., Snow, J., and Gunnarson, A. (2004). Intraflagellar transport motors in Caenorhabditis elegans neurons. Biochemical Society transactions 32, 682-684.
17. Shemer, G., and Podbilewicz, B. (2000). Fusomorphogenesis: cell fusion in organ formation. Developmental dynamics : an official publication of the American Association of Anatomists 218, 30-51.
18. Simske, J.S., and Hardin, J. (2001). Getting into shape: epidermal morphogenesis in Caenorhabditis elegans embryos. BioEssays : news and reviews in molecular, cellular and developmental biology 23, 12-23.
19. Snow, J.J., Ou, G., Gunnarson, A.L., Walker, M.R., Zhou, H.M., Brust-Mascher, I., and Scholey, J.M. (2004). Two anterograde intraflagellar transport motors cooperate to build sensory cilia on C. elegans neurons. Nature cell biology 6, 1109-1113.
20. Solari, F., Bateman, A., and Ahringer, J. (1999). The Caenorhabditis elegans genes egl-27 and egr-1 are similar to MTA1, a member of a chromatin regulatory complex, and are redundantly required for embryonic patterning. Development 126, 2483-2494.
21. Sulston, J.E., and Horvitz, H.R. (1977). Post-embryonic cell lineages of the nematode, Caenorhabditis elegans. Developmental biology 56, 110-156.
22. Sulston, J.E., Schierenberg, E., White, J.G., and Thomson, J.N. (1983). The embryonic cell lineage of the nematode Caenorhabditis elegans. Developmental biology 100, 64-119.
23. Vukajlovic, M., Dietz, H., Schliwa, M., and Okten, Z. (2011). How kinesin-2 forms a stalk. Molecular biology of the cell 22, 4279-4287.
24. Wicks, S.R., de Vries, C.J., van Luenen, H.G., and Plasterk, R.H. (2000). CHE-3, a cytosolic dynein heavy chain, is required for sensory cilia structure and function in Caenorhabditis elegans. Developmental biology 221, 295-307.
25. Williams-Masson, E.M., Heid, P.J., Lavin, C.A., and Hardin, J. (1998). The cellular mechanism of epithelial rearrangement during morphogenesis of the Caenorhabditis elegans dorsal hypodermis. Developmental biology 204, 263-276.
26. Williams-Masson, E.M., Malik, A.N., and Hardin, J. (1997). An actin-mediated two-step mechanism is required for ventral enclosure of the C. elegans hypodermis. Development 124, 2889-2901.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/56546-
dc.description.abstract型態發生(morphogenesis)是多細胞生物個體發育出完整外觀樣貌的重要步驟。在線蟲(Caenorhabditis elegans)中,表皮組織跟肌肉組織的發育為調控形態發生的主要環節。在先前的遺傳實驗中,我們找到一個klp-11(tp8)的突變株,會在身體表面產生圓弧狀突起的異常身體型態,在此我們將之稱為bulge。klp-11屬於第二類kinesin驅動蛋白,tp8會導致其高度保守性驅動區域的第兩百五十一個甘胺酸突變成天門冬胺酸。利用RNAi的方式將klp-11抑制,會導致klp-11(tp8)這個突變株的腫脹凸起的比例下降,但不會造成野生型的線蟲產生腫脹凸起的缺陷,據此推測tp8可能是一個具有新功能的等位基因。因為腫脹突起的位置是發生於線蟲身體表面,而位於線蟲身體外層的細胞類型是表皮細胞與肌肉細胞,因此我們利用會表現在特定組織的螢光蛋白觀察,發現在腫脹突起區域確實存在表皮與肌肉細胞的表現,表示tp8可能是影響到這些細胞而導致腫脹凸起的現象產生。接下來我們更進一步的利用穿透式電子顯微鏡了解klp-11(tp8)突變株腫脹凸起的地方或是其他區域是否有異常。與先前螢光蛋白觀察的結果相符的是在腫脹凸起的地方會有表皮與肌肉細胞的存在。除此之外,我們還觀察到表皮細胞與神經細胞會累積在腫脹區域的底部,某些表皮細胞甚而往下生長至肌肉細胞的下方,造成彼此鑲嵌的現象。這些現象顯示klp-11(tp8)是一個在許多細胞類型中具有多重缺陷的突變。我們觀察到在腫脹凸起的地方會有表皮、肌肉、神經細胞與流體囊泡的存在,所以我們推測造成腫脹的原因可能是因為囊泡的運送發生問題或是這些細胞產生不正常的增生。我們表現正常的klp-11基因接上會專一表現在肌肉細胞的啟動子可以部份挽救腫脹凸起的產生,顯示tp8可以藉由影響肌肉細胞而導致腫脹,但除此之外,亦有其他細胞種類參與其中。此外,因為KLP-11會與KLP-20及KAP-1兩個蛋白質形成一個異源三聚體並在感覺神經元的鞭毛中的纖毛上進行物質的運送,因此我們推測klp-11(tp8)可能影響到進行運送物質的功能,使得運送物質異常大量累積於負向端進而使得線蟲身體的型態產生向外腫脹凸起的異常外觀。zh_TW
dc.description.abstractMorphogenesis is an essential process for a multi-cellular organism to develop into its characteristic body shape. In C. elegans, this process is largely controlled by the development of hypodermis and muscle tissues. In a genetic screen, we isolated the klp-11(tp8) mutant with an abnormal body shape, which has an arcuate swell in the body surface, referred as “bulge” here. klp-11 encodes a type II kinesin motor protein subunit. tp8 caused an amino acid substitution from glycine to aspartate in a highly conserved residue in the motor domain. Deletion of klp-11 by RNA interference caused no effect in the wild-type but suppressed the bulge phenotype in the klp-11(tp8) mutant, suggesting that tp8 may be a neomorphic allele of klp-11. We found that cells in the bulge consists of hypodermal, muscle cells or neurons using cell-specific fluorescence reporters. Consistently, klp-11 was found to be expressed in these cells. It is possible that tp8 may elicit an abnormal function of a kinesin complex to cause bulge formation from these cells. We next examined the ultrastructural defects in the bulge and other part(s) of the klp-11(tp8) mutant, using the transmission electron microscopy (TEM), and find muscle cells and neurons here within the bulge region, consistent with the fluorescent microscopy result. We also found the hypodermal cells grow under the muscle cells in the klp-11(tp8) mutant. These data show that tp8 causes multiple defects in various cell types. We observed many vesicles, neurons, muscle and hypodermal cells accumulated in the bulge region, so we hypothesized that the bulge may be caused by mis-regulation of vesicle transport and/or cell proliferation. We expressed wild-type klp-11 under the control of muscle-specific promoter could partially rescue the bulge phenotype indicated that klp-11 may function at least in muscle cells to prevent the bulge formation. In addition, because KLP-11 forms a heterotrimer with KLP-20 and KAP-1 and function as intraflagellar transport (IFT) in ciliated sensory neurons, we speculate that klp-11(tp8) may influence cargo transport by abnormal cargo accumulation in the minus end or absence of cargo in the plus end to cause bulge phenotype.en
dc.description.provenanceMade available in DSpace on 2021-06-16T05:34:08Z (GMT). No. of bitstreams: 1
ntu-103-R01b43009-1.pdf: 7591109 bytes, checksum: b15eb3f3417f69b50e58bf8d237c6f11 (MD5)
Previous issue date: 2014
en
dc.description.tableofcontents致謝 i
中文摘要 ii
Abstract iii
Tables of content 1
Introduction 4
Materials and methods 8
C. elegans strains 8
RNA interference (RNAi) 8
Transgenic worms 9
Microscopy 9
Transmission electron microscopy (TEM) 9
Results 11
The klp-11(tp8) single mutant has bulged phenotype 11
Bulge is an allele-specific phenotype in klp-11(tp8) mutant 12
klp-11(tp8) is likely a neomorphic allele to cause bulge formation 12
klp-11 may cause the bulge formation by abnormal cargo accumulation 13
klp-11 was expressed in neurons、hypodermal and muscle cells 14
Bulged region contains hypodermal and muscle cells, sometimes a neuron 15
Muscle-expressed klp-11 can partially rescue the bulge phenotype 15
Transmission electron microscopy (TEM) datas indicate bulged region contains some cell types 16
Discussion 17
klp-11(tp8) has a new function to produce the abnormal cargos accumulation 17
The klp-11(tp8) mutant may affects hypodermal and muscle cells to cause bulge 18
The abnormal existence of multivesicular body may lead to bulged phenotype 19
References 22
Figures 26
Fig-1 KLP11 and KLP20 form a heterodimer that C-terminally associates with the cargo binding subunit, KAP-1 to transport cargo with OSM-3 26
Fig-2 The grp-1(gm350); klp-11(tp8) mutant shows abnormal body morphology 28
Fig-3 The klp-11(tp8) single mutant has body bulged phenotype 29
Fig-4 The expression of klp-11 in the hypodermal cells 30
Fig-5 The expression of klp-11 in the muscle cells 32
Fig-6 The expression of klp-11 in the neurons 33
Fig-7 Bulged region contains both hypodermal and muscle cells 34
Fig-8 Some klp-11(tp8) mutants show abnormal expression pattern 35
Fig-9 The bulged region contains muscle nucleus 36
Fig-10 The bulged region sometimes contains a neuron 37
Fig-11 The cross section of klp-11(tp8) shows some defects 39
Fig-12 The bulged region contains neurons and muscle cells 40
Fig-12 There are many multivesicular bodies(MVB) in the bulged region 42
Fig-14 The model of bulge formation 43
Tables 44
Table 1 Bulge is an allele-specific phenotype in klp-11(tp8) mutant 44
Table 2 Bulges are often observed between the mid body to anus at the dorsal side of the klp-11(tp8) mutant 45
Table 3 Both klp-20 and kap-1 mutants show no bulged phenotype 46
Table 4 klp-11(tp8) is a recessive mutant allele 47
Table 5 Overexpression of klp-11 promoter-driven klp-11 cDNA can rescue the bulged phenotype of klp-11(tp8) mutant 48
Table 6 klp-11(tp8) is likely a neomorphic allele to cause bulge formation 49
Table 7 The bulge formation in klp-11(tp8) mutant may be the outcome of cargo accumulation 50
Table 8 Bulged phenotype in klp-11(tp8) mutant may be the consequence of dynein cargo accumulation in the minus end of microtubule 51
Table 9 Muscle-expression klp-11 can partially rescue the bulged phenotype 52
Supplemental figures 53
Fig-S1 Screen for mutant with abnormal tail morphology in the grp-1 mutant 53
Supplemental tables 54
Table S1 klp-11(tp8) is likely a neomorphic allele to cause bulge formation 54
dc.language.isozh-TW
dc.title一個具有新功能的klp-11突變導致線蟲異常的身體型態zh_TW
dc.titleA neomorphic allele of klp-11 causes abnormal body morphology in C. elegansen
dc.typeThesis
dc.date.schoolyear102-2
dc.description.degree碩士
dc.contributor.oralexamcommittee廖秀娟,吳瑞菁
dc.subject.keyword型態異常,驅動蛋白,zh_TW
dc.subject.keywordklp-11,kinesin,morphology,en
dc.relation.page54
dc.rights.note有償授權
dc.date.accepted2014-08-13
dc.contributor.author-college生命科學院zh_TW
dc.contributor.author-dept分子與細胞生物學研究所zh_TW
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