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| DC 欄位 | 值 | 語言 |
|---|---|---|
| dc.contributor.advisor | 趙玲 | |
| dc.contributor.author | Cheng-Jung Kuo | en |
| dc.contributor.author | 郭政融 | zh_TW |
| dc.date.accessioned | 2021-06-16T02:49:57Z | - |
| dc.date.available | 2025-12-31 | |
| dc.date.copyright | 2015-10-12 | |
| dc.date.issued | 2015 | |
| dc.date.submitted | 2015-07-15 | |
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F.; Takeda, J.; Lin, D.; Fukumoto, H.; Seino, S., Molecular biology of mammalian glucose transporters. Diabetes care 1990, 13 (3), 198-208. 53. http://www.angelfire.com/sc3/toxchick/celmolbio/celmolbio12.html 54. Zhao, F.-Q.; Keating, A. F., Functional properties and genomics of glucose transporters. Current genomics 2007, 8 (2), 113. 55. (a) Mesonero, J.; Matosin, M.; Cambier, D.; Rodriguez-Yoldi, M.; Brot-Laroche, E., Sugar-dependent expression of the fructose transporter GLUT5 in Caco-2 cells. Biochem. J 1995, 312, 757-762; (b) Thorens, H.-G. J., Bernard, The extended GLUT-family of sugar/polyol transport facilitators: nomenclature, sequence characteristics, and potential function of its novel members. Molecular membrane biology 2001, 18 (4), 247-256. 56. Shennan, D. B.; Beechey, R. B., Mechanisms involved in the uptake of D-glucose into the milk-producing cells of rat mammary tissue. 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Turhan-Sayan, G., Temperature effects on surface plasmon resonance: design considerations for an optical temperature sensor. Journal of Lightwave Technology 2003, 21 (3), 805. 64. De Los Santos, V. L.; Lee, D.; Seo, J.; Leon, F. L.; Bustamante, D. A.; Suzuki, S.; Majima, Y.; Mitrelias, T.; Ionescu, A.; Barnes, C. H., Crystallization and surface morphology of Au/SiO 2 thin films following furnace and flame annealing. Surface Science 2009, 603 (19), 2978-2985. 65. Siqueira Petri, D. F.; Wenz, G.; Schunk, P.; Schimmel, T., An improved method for the assembly of amino-terminated monolayers on SiO2 and the vapor deposition of gold layers. Langmuir 1999, 15 (13), 4520-4523. 66. Hansen, J. S.; Elbing, K.; Thompson, J. R.; Malmstadt, N.; Lindkvist-Petersson, K., Glucose transport machinery reconstituted in cell models. Chemical Communications 2015, 51 (12), 2316-2319. | |
| dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/54313 | - |
| dc.description.abstract | 研究膜上通道蛋白質進行跨膜運輸的相關現象對於了解生物機制及應用扮演著重要的角色,而現今在研究通道蛋白運作時(尤其在離子的遷移)主要使用的工具為膜片箝制(Patch Clamp)技術,此技術雖然已經發展得相當成熟、精確,然而卻需要經過高強度訓練和經驗豐富的操作人員來操作,以及需要相對高昂的設備成本的門檻。我們希望能在無需使用螢光或放射物等標記的前提下,建構出一個能提供通道蛋白運輸物質總量之動態資訊的技術平台。 我們在本實驗中提供兩種平台: 具蝕刻結構之表面電漿共振平台以及電漿波導/表面電漿共振混合模態平台。兩種平台均具有微米等級的二氧化矽厚膜蝕刻陣列結構,以提供脂質膜將未被蝕刻的區塊作為支撐基點,而在此結構上形成跨孔洞型態之脂質膜,以區隔孔洞內部空間以及蝕刻結構外部的空間。具蝕刻結構之表面電漿共振平台為在將石英玻璃基材蝕刻後,於微米等級的孔洞底部沉積薄膜金層,以表面電漿共振模態(Surface Plasmon Resonance)來偵測孔洞內部空間之物質濃度累積變化。至於電漿波導/表面電漿共振混合模態平台,則是可容納兩種電磁波共振模態同時存在,即表面電漿共振模態及電漿波導共振模態(Plasmon-waveguide Resonance)。在此蝕刻的結構中,孔洞底部鍍有裸露的薄膜金以作為表面電漿共振的介質,用以偵測孔洞內部空間之物質累積變化;未被蝕刻的區塊一方面作為脂質膜的支撐基點,一方面由其特定厚度之二氧化矽和底部金膜形成電漿波導共振模態的存在介質,用以偵測脂質膜上的吸附現象以及膜外溶液之改變。 本次實驗我們將海拉細胞(Hela cell)的細胞膜鋪於這兩種特殊結構的平台,來示範葡萄糖通過葡萄糖運輸蛋白質(Glut 1 and Glut2)的運輸行為,以及相對應之藥物 (細胞鬆弛劑及根皮素) 可如何調控其運輸行為。我們期待可將此平台推廣至可動態監控不同種類之通道膜蛋白運送物質的機制,以及配體(Ligand)和藥物對於通道蛋白質的結合現象。 | zh_TW |
| dc.description.abstract | Studying species transport across lipid membranes by membrane transport proteins is important for various biological applications. Although patch-clamp technique is well developed for recording the ion transport across lipid membranes, the technique requires well trained personals for the challenging and delicate operation. In this study, we created two types of platforms: grating structured SPR chip and PWR/SPR combined chip. Both types of chips have sub-micron sized grating pore array structures to allow lipid membranes to span over the pores and separate the space inside the pore from the outside environment. In the grating structured SPR chip, the gold film was only coated at the bottom of the pore and only the change of refractive index in the pore region close to the gold surface can be sensed by the surface plasmon resonance. The change of refractive index can be correlated to the target species concentration change and therefore the chip can be used to detect how much target species is transported into the pore region across the lipid membrane. The structure of the PWR/SPR combined chip is similar to the one of the grating structured SPR chip, and the only difference is that the gold film was not only at the bottom of the grating pore but also below the grating top region composed of the silicon dioxide layer. The geometry of the PWR/SPR combined chip allowed us to use the surface plasmon resonance (SPR) to detect the refractive index change in the pore region, which is correlated to the target species concentration inside the pore, and the plasmon-waveguide resonance (PWR) to simultaneously monitor the change of refractive index at the top silica surface, which is correlated to the binding events occurring on the lipid membrane surface. Here, we used giant plasma membrane-derived vesicles (GPMV) from Hela cell to span across the sub-micron sized pore structure to demonstrate how these two platforms can be used to study the glucose transport through the corresponding transporters (Glut 1, Glut2). In the future, we plan to use these platforms to monitor how various inhibitors or ligands could influence the transport dynamics of interested membrane transport proteins. | en |
| dc.description.provenance | Made available in DSpace on 2021-06-16T02:49:57Z (GMT). No. of bitstreams: 1 ntu-104-R02524010-1.pdf: 8412884 bytes, checksum: 115e45e3b5e6a33c9672a36302ea6c40 (MD5) Previous issue date: 2015 | en |
| dc.description.tableofcontents | 摘要 I Abstract III Table of Content V Figure captions VIII Table captions XIII 1. Introduction 1 1.1 Overview 1 1.2 Surface Plasmon Resonance (SPR) Theory 3 1.2.1 Surface Plasmon Resonance (SPR) and Resonance Angle 3 1.2.2 Angle scanning mode 14 1.3 Plasmon Waveguide Resonance (PWR) 16 1.4 Giant Unilamellar Vesicle (GUV) and Giant Plasma-Membrane Vesicle (GPMV) 18 1.4.1 Giant Unilamellar Vesicle (GUV) 19 1.4.2 Giant plasma membrane-derived vesicles (GPMV) 20 1.5 Glucose transporter family (Glut family) and their function 22 1.5.1 Glucose transporter family (Glut family) 22 1.5.2 Glucose transporter 1 (Glut1) 24 1.5.3 Glucose transporter 2 (Glut2)46 25 1.6 Summary 26 2. Materials and methods 27 2.1 Homemade SPR system 27 2.1.1 Materials used for homemade SPR 27 2.1.2 Matlab code to find out the resonance angle 28 2.2 Numerical modeling: simulation for conventional SPR, grating structured SPR, PWR and PWR/SPR combined chips 29 2.3 Fabrication of SPR, structured-SPR, PWR and PWR/SPR combined chips 31 2.3.1 Materials used for chip fabrication 31 2.3.2 Conventional SPR chip 31 2.3.3 Fabrication of grating structured SPR chip 32 2.3.4 PWR chips with 510nm SiO2 layer 35 2.3.5 PWR / SPR combined chip with structure of grating array 38 2.4 Membrane formation and glucose transport experiment 42 2.4.1 Lipid, chemicals and biomaterials 42 2.4.2 Preparation of giant unilamellar vesicle (GUV) solutions 42 2.4.3 Preparation of giant plasma-membrane vesicle (GPMV) solutions 43 2.4.4 Use DOPC/Texas Red DHPE to examine the location of deposited GPMV 44 2.4.5 Fluorescence recovery after photo-bleaching (FRAP) 44 2.5 Standard test on fabricated chips 45 2.5.1 Air and water test on a conventional SPR chip for calibration 45 2.5.2 Standard test on conventional SPR chip with air and water, respectively 46 2.5.3 Standard test on PWR chip with air and water, respectively 48 2.6 Device for holding solutions 50 2.6.1 PDMS Wells 50 2.6.2 Flow chamber 51 2.7 Glucose transport 52 2.7.1 Preparation of solutions and operation of flow chamber for the glucose transport experiment 52 2.7.2 Glucose transport experiment with solution replacing process 53 2.7.3 Glucose transport experiment with the addition of Cytochalasin B and Phloretin 54 2.7.5 Control experiment of the glucose transport experiment 54 3. Results 55 3.1 Grating structured SPR 55 3.1.1 Use of COMSOL simulation to find out proper grating structure size for grating structured SPR chip that retains resonance performance 55 3.1.3 GUV membranes on grating structured SPR sensor chip 65 3.2 PWR/SPR combined chip 70 3.2.1 Using COMSOL simulation to find out proper grating size for the PWR/SPR combined chip that retains desired resonance performance 70 3.2.2 Using water to examine the performance of the PWR/SPR combined chip 77 3.3 GPMV membranes on grating structured SPR or PWR/SPR combined chips 79 3.4 Examine the glucose transport through a supported GPMV membrane by using real time detection mode and angle scanning mode 81 3.4.1 Real time detection mode and angle scanning mode examine glucose transport by using GPMVs deposition on grating structured SPR chips 82 3.4.2 Real time detection mode and angle scanning mode to examine glucose transport by using GPMVs deposition on PWR/SPR combined chip 86 4. Discussion 90 4.1 The difference between the resonance angles from experiments and from simulations 90 4.1.1 Defects in the fabricated chips 91 4.1.2 Uncertainty from temperature and humidity 92 4.1.3 Uncertainty of the SiO2 layer thickness 93 4.1.4 Uncertainties due to the annealing process 96 4.2 Two resonance angles in the PWR/SPR combined chip 98 4.3 Glucose transport through supported GPMV membranes covering over the grating structured SPR chip or the PWR/SPR combined chip 100 5. Conclusions 102 6. Appendix 103 6.1 SPR System overview 103 6.1.1 Laser pathway 104 6.1.2 Light pretreatment for SPR (right wing) 104 6.1.3 Sample examination (rotation stage) 106 6.1.4 Detection (left wing) 108 6.2 Detail structure of parts in homemade SPR system 109 6.2.1 Main platform 109 6.2.2 L-plate 110 6.2.3 Car and brake system 111 6.2.4 Position adjuster 112 6.2.5 Sample holder 114 6.2.6 Right wing 115 6.2.7 Left wing 116 6.2.8 Photodiode 118 6.2.9 Prism and matching oil 119 6.2.10 Motor and the controlling system 120 6.2.11 DAQ card system: NI USB-6009 (National Instruments) 122 6.2.12 Labview software to control motors and obtain signals from photodiode 123 6.2.13 Matlab code to control the movement of motors 127 6.3 Mask design 131 7. Reference 132 | |
| dc.language.iso | en | |
| dc.subject | 微米蝕刻結構 | zh_TW |
| dc.subject | 表面電漿共振 | zh_TW |
| dc.subject | 電漿波導共振 | zh_TW |
| dc.subject | 跨孔洞懸浮脂質膜 | zh_TW |
| dc.subject | 通道蛋白質 | zh_TW |
| dc.subject | 表面電漿共振 | zh_TW |
| dc.subject | 電漿波導共振 | zh_TW |
| dc.subject | 微米蝕刻結構 | zh_TW |
| dc.subject | 跨孔洞懸浮脂質膜 | zh_TW |
| dc.subject | 通道蛋白質 | zh_TW |
| dc.subject | transport membrane protein | en |
| dc.subject | plasmon-waveguide resonance | en |
| dc.subject | sub-micron grating structure | en |
| dc.subject | free-standing lipid membrane | en |
| dc.subject | transport membrane protein | en |
| dc.subject | plasmon-waveguide resonance | en |
| dc.subject | sub-micron grating structure | en |
| dc.subject | free-standing lipid membrane | en |
| dc.subject | surface plasmon resonance | en |
| dc.subject | surface plasmon resonance | en |
| dc.title | 發展同時具有表面電漿共振以及電漿波導共振之微結構晶片以研究葡萄糖之跨細胞膜傳輸現象 | zh_TW |
| dc.title | Development of Grating Structured Surface Plasmon Resonance Chip and Plasmon Waveguide Resonance/Surface Plasmon Resonance Combined Chip to Study Glucose Transport across Cell Membranes | en |
| dc.type | Thesis | |
| dc.date.schoolyear | 103-2 | |
| dc.description.degree | 碩士 | |
| dc.contributor.oralexamcommittee | 林資榕,謝之真,史有伶 | |
| dc.subject.keyword | 表面電漿共振,電漿波導共振,微米蝕刻結構,跨孔洞懸浮脂質膜,通道蛋白質, | zh_TW |
| dc.subject.keyword | surface plasmon resonance,plasmon-waveguide resonance,sub-micron grating structure,free-standing lipid membrane,transport membrane protein, | en |
| dc.relation.page | 136 | |
| dc.rights.note | 有償授權 | |
| dc.date.accepted | 2015-07-15 | |
| dc.contributor.author-college | 工學院 | zh_TW |
| dc.contributor.author-dept | 化學工程學研究所 | zh_TW |
| 顯示於系所單位: | 化學工程學系 | |
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