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  1. NTU Theses and Dissertations Repository
  2. 生物資源暨農學院
  3. 農藝學系
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/44640
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor胡凱康
dc.contributor.authorChia-Hsuan Suen
dc.contributor.author蘇家玄zh_TW
dc.date.accessioned2021-06-15T03:52:09Z-
dc.date.available2015-07-13
dc.date.copyright2010-07-13
dc.date.issued2010
dc.date.submitted2010-07-09
dc.identifier.citation王群山. (2010) 控制水稻穀粒長、穀粒寬、抽穗期、株高與穗長之數量性狀基因座 的遺傳定位. 碩士論文.
曾馨儀. (2010) 秈稉稻雜交BC1F1 及F2 族群之不平衡分離. 碩士論文.
張瑪利, 羅正宗, 劉景平. (2006) 日長對水稻栽培品種抽穗及農藝性狀之影響. 作 物、環境與生物資訊 3:147-158.
Aquino R.C., Jennings P.R. (1966) Inheritance and significance of dwarfism in an indica rice variety. Crop Sci. 6:551-&.
Broman K.W., Wu H., Sen S., Churchill G.A. (2003) R/qtl: QTL mapping in experimental crosses. Bioinformatics 19:889-890.
Chang. T.-T., Li. C.-C., Vergara B.S. (1969) Component analysis of duration from seeding to heading in rice by the basic vegetative phase and the photoperiod-sensitive phase. Euphytica 18:79-91.
Cho Y.G., Eun M.Y., Kim Y.K., Chung T.Y., Chae Y.A. (1994) The Semidwarf Gene, Sd-1, of Rice (Oryza sativa L) .1. Linkage with the Esterase Locus, Esti-2. Theor Appl Genet. 89:49-53.
Churchill G.A., Doerge R.W. (1994) Empirical threshold values for quantitative trait mapping. Genetics 138:963-971.
Cui K., Peng S.B., Ying Y.Z., Yu S.B., Xu C.G. (2004) Molecular dissection of the relationships among tiller number, plant height and heading date in rice. Plant Production Science 7:309-318.
Darvasi A., Soller M. (1997) A simple method to calculate resolving power and confidence interval of QTL map location. Behavior Genetics 27:125-132.
Doi K., Yoshimura A., Iwata N. (1998) RFLP mapping and QTL analysis of heading date and pollen sterility using backcross populations between Oryza sativa L. and Oryza glaberrima Steud. Breeding Sci. 48:395-399.
Doi K., Izawa T., Fuse T., Yamanouchi U., Kubo T., Shimatani Z., Yano M., Yoshimura A. (2004) Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-Iike gene expression independently of Hd1. Genes & Development 18:926-936.
Falconer D. (1981) Introduction to quantitative genetics, 2nd edn. Longman Press, New York.
Fujino K., Sekiguchi H. (2005) Identification of QTLs conferring genetic variation for heading date among rice varieties at the northern-limit of rice cultivation. Breeding Sci. 55:141-146.
Fukuta Y., Kobayashi S., Tsunematsu H., A. Ebron L., Kato H., Umemoto T., Morita S., Sato T., Yamaya T., Nagamine T., Fukuyama T., Sasahara H., Ashikawa I., Tamura K., Nemoto H., Maeda H., Hamamura K., Ogata T., Matsue Y., Ichitani K., Takagi A. (2000) Response of QTLs for heading date in rice at different sites from tropical to temperate regions. Advances In Rce Genetics:233-237.
Gao F., Jiang Yong, Kong Dewei, Shighi L. (2005) Genetic control of plant height and its utilization in rice. Molecular Plant Breeding 3:87-93.
Garner W.W. (1933) Comparative responses of long-day and short-day plants to relative length of day and night. Plant Physiology 8:347-356.
Haley C.S., Knott S.A. (1992) A smple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity 69:315-324.
Inoue H., Nishida H., Okumoto Y., Tanisaka T. (1998) Identification of an early heading time gene found in the Taiwanese rice cultivar Taichung 65. Breeding Sci. 48:103-108.
Jain S.K., Marshall D.R. (1967) Population studies in predominantly self-pollinating species .X. variation in natural populations of Avena fatua and a Barbata. American Naturalist 101:19.
Kao C.H., Zeng Z.B., Teasdale R.D. (1999) Multiple interval mapping for quantitative trait loci. Genetics 152:1203-1216.
Lee S.H., Bailey M.A., Mian M.A.R., Carter T.E., Ashley D.A., Hussey R.S., Parrott W.A., Boerma H.R. (1996) Molecular markers associated with soybean plant height, lodging, and maturity across locations. Crop Sci. 36:728-735.
Li Z.K., Pinson S.R.M., Stansel J.W., Park W.D. (1995) Identification of quantitative trait loci (Qtls) for heading date and plant Height in cultivated rice (Oryza sativa L). Theor Appl Genet. 91:374-381.
Li Z.K., Yu S.B., Lafitte H.R., Huang N., Courtois B., Hittalmani S., Vijayakumar C.H.M., Liu G.F., Wang G.C., Shashidhar H.E., Zhuang J.Y., Zheng K.L., Singh V.P., Sidhu J.S., Srivantaneeyakul S., Khush G.S. (2003) QTL x environment interactions in rice. I. Heading date and plant height. Theor Appl Genet. 108:141-153.
Lin H., Zhuang J., Qian H., Lu J., Min S., Xiong Z., Huang N., Zheng K. (1996) Mapping QTLs for plant height and Its components by molecular markers in rice (Oryza sativa L.). Acta Agrono Sinica 3:257-263.
Lin H.X., Liang Z.W., Sasaki T., Yano M. (2003) Fine mapping and characterization of quantitative trait loci Hd4 and Hd5 controlling heading date in rice. Breeding Sci. 53:51-59.
Lin H.X., Ashikari M., Yamanouchi U., Sasaki T., Yano M. (2002) Identification and 62 characterization of a quantitative trait locus, Hd9, controlling heading date in rice. Breeding Sci. 52:35-41.
Lin S.Y., Sasaki T., Yano M. (1998) Mapping quantitative trait loci controlling seed dormancy and heading date in rice, Oryza sativa L., using backcross inbred lines. Theor Appl Genet. 96:997-1003.
Liu G., Yang J., Xu H., Zhu J. (2007) Influence of epistasis and QTL x environment interaction on heading date of rice (Oryza sativa L.). J Genet Genomics 34:608-15.
Liu G.F., Zhang Z.M., Zhu H.T., Zhao F.M., Ding X.H., Zeng R.Z., Li W.T., Zhang G.Q. (2008) Detection of QTLs with additive effects and additive-by-environment interaction effects on panicle number in rice (Oryza sativa L.) with single-segment substitution lines. Theor Appl Genet. 116:923-931.
Lu C., Shen L., Tan Z., Xu Y., He P., Chen Y., Zhu L. (1996) Comparative mapping of QTLs for agronomic traits of rice across environments using a doubled haploid population. Theor Appl Genet. 93:1211-1217.
Lu C.F., Shen L.S., Tan Z.B., Xu Y.B., He P., Chen Y., Zhu L.H. (1997) Comparative mapping of QTLs for agronomic traits of rice across environments by using a doubled-haploid population. Theor Appl Genet. 94:145-150.
Maeda H., Ishii T., Mori H., Kuroda J., Horimoto M., Takamure I., Kinoshita T., Kamijima O. (1997) High density molecular map of semidwarfing gene, sd-1, in rice (Oryza sativa L.). Breeding Sci.47:317-320.
Mei H.W., Luo L.J., Ying C.S., Wang Y.P., Yu X.Q., Guo L.B., Paterson A.H., Li Z.K. (2003) Gene actions of QTLs affecting several agronomic traits resolved in a recombinant inbred rice population and two testcross populations. Theor Appl Genet. 107:89-101.
Mohamed A.H., Hanna A.S. (1964) Inheritance of quantitative characters in rice .I. Estimation of number of effective factor pairs controlling plant height. Genetics 49:81.
Monna L., Lin H.X., Kojima S., Sasaki T., Yano M. (2002a) Genetic dissection of a genomic region for a quantitative trait locus, Hd3, into two loci, Hd3a and Hd3b, controlling heading date in rice. Theor Appl Genet. 104:772-778.
Monna L., Kitazawa N., Yoshino R., Suzuki J., Masuda H., Maehara Y., Tanji M., Sato M., Nasu S., Minobe Y. (2002b) Positional cloning of rice semidwarfing gene, sd-1: Rice 'Green revolution gene' encodes a mutant enzyme involved in gibberellin synthesis. DNA Research 9:11-17.
Nishida H., Inoue H., Okumoto Y., Tanisaka T. (2002) A novel gene ef1-h conferring an extremely long basic vegetative growth period in rice. Crop Sci. 42:348-354.
Paterson. (1991) Mendelian factors underlying quantitative traits in tomato: Comparison 63 across species, generations, and environments. Genetics 127:181-197.
Paterson A.H., Damon S., Hewitt J.D., Zamir D., Rabinowitch H.D., Lincoln S.E., Lander E.S., Tanksley S.D. (1991) Mendelian factors underlying quantitative traits in tomato: Comparison across species, generations, and environments. Genetics 127:181-197.
Sabouri H., Nahvi M. (2009) Identification of major and minor genes associated with heading date in an indica x indica cross of rice (Oryza Sativa L.). International Journal of Plant Production 3:105-113.
Saito H., Yuan Q.B., Okumoto Y., Doi K., Yoshimura A., Inoue H., Teraishi M., Tsukiyama T., Tanisaka T. (2009) Multiple alleles at Early flowering 1 locus making variation in the basic vegetative growth period in rice (Oryza sativaL.). Theor Appl Genet. 119:315-323.
Sasaki A., Ashikari M., Ueguchi-Tanaka M., Itoh H., Nishimura A., Swapan D., Ishiyama K., Saito T., Kobayashi M., Khush G.S., Kitano H., Matsuoka M. (2002) Green revolution: A mutant gibberellin-synthesis gene in rice - New insight into the rice variant that helped to avert famine over thirty years ago. Nature 416:701-702.
Sato S., Sakamoto I., Shirakawa K., Nakasone S. (1988) Chromosomal location of an earliness gene ef1 of rice. Oyza sativa L. Japanese Journal of Breeding 38:385-396.
Schon C.C., Melchinger A.E., Boppenmaier J., Brunklausjung E., Herrmann R.G., Seitzer J.F. (1994) RFLP mapping in mauze - quantitative trait loci affecting testcross performance of elite european flint lines. Crop Sci. 34:378-389.
Spielmeyer W., Ellis M.H., Chandler P.M. (2002) Semidwarf (sd-1), 'green revolution' rice, contains a defective gibberellin 20-oxidase gene. Proceedings of the National Academy of Sciences of the United States of America 99:9043-9048.
Takahashi Y., Teshima K.M., Yokoi S., Innan H., Shimamoto K. (2009) Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice. Proceedings of the National Academy of Sciences of the United States of America 106:4555-4560.
Thomson M.J., Tai T.H., McClung A.M., Lai X.H., Hinga M.E., Lobos K.B., Xu Y., Martinez C.P., McCouch S.R. (2003) Mapping quantitative trait loci for yield, yield components and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson. Theor Appl Genet. 107:479-493.
Tsai K.-H. (1986) Gene Loci and alleles contrilling the duration of basic vegetative growth of rice. IRRI, Manila:339-349.
Tsai K.H. (1974) Effects of an earliness gene, E, on organ development and adaptability 64 in the genetic background of a rice variety, Taichung 65. J. Agric. Assoc. China, N.S. 87:1-20.
Veldboom L.R., Lee M. (1996a) Genetic mapping of quantitative trait loci in maize in stress and nonstress environments .1. Grain yield and yield components. Crop Sci. 36:1310-1319.
Veldboom L.R., Lee M. (1996b) Genetic mapping of quantitative trait loci in maize in stress and nonstress environments .2. Plant height and flowering. Crop Sci. 36:1320-1327.
Vergara BS C.T. (1985) The flowering response of the rice plant th photoperiod. 4th edn. International Rice Research Institute, Manila, The Philippines.
Wang D.L., Zhu J., Li Z.K., Paterson A.H. (1999) Mapping QTLs with epistatic effects and QTLxenvironment interactions by mixed linear model approaches. Theor Appl Genet. 99:1255-1264.
Xiao J., Li J., Yuan L., Tanksley S.D. (1996) Identification of QTLs affecting traits of agronomic importance in a recombinant inbred population derived from a subspecific rice cross. Theor Appl Genet. 92:230-244.
Xiong L.X., Liu K.D., Dai X.K., Xu C.G., Zhang Q.F. (1999) Identification of genetic factors controlling domestication-related traits of rice using an F2 population of a cross between Oryza sativa and O. rufipogon. Theor Appl Genet. 98:243-251.
Yamamoto T., Lin H.X., Sasaki T., Yano M. (2000) Identification of heading date quantitative trait locus Hd6 and characterization of its epistatic interactions with Hd2 in rice using advanced backcross progeny. Genetics 154:885-891.
Yamamoto T., Taguchi-Shiobara F., Ukai Y., Sasaki T., Yano M. (2001) Mapping quantitative trait loci for days-to-heading, and culm, panicle and internode lengths in a BC1F3 population using an elite rice variety, Koshihikari, as the recurrent parent. Breeding Sci. 51:63-71.
Yano M., Harushima Y., Nagamura Y., Kurata N., Minobe Y., Sasaki T. (1997) Identification of quantitative trait loci controlling heading date in rice using a high-density linkage map. Theor Appl Genet. 95:1025-1032.
Yano M., Katayose Y., Ashikari M., Yamanouchi U., Monna L., Fuse T., Baba T., Yamamoto K., Umehara Y., Nagamura Y., Sasaki T. (2000) Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the arabidopsis flowering time gene constans. Plant Cell 12:2473-2483.
Yokoo M., Kikuchi F., Nakane A. (1979) Genic analysis of heading time by aid of close linkage with blast resistance in roce. Jarq-Japan Agricultural Research Quarterly 13:215-221.
Yu S.B., Li J.X., Xu C.G., Tan Y.F., Li X.H., Zhang Q.F. (2002) Identification of quantitative trait loci and epistatic interactions for plant height and heading date 65 in rice. Theor Appl Genet. 104:619-625.
Yuan A.-P., Cao L.-y., Zhuang J.-Y., Li R.-z., Zheng K.-L., Zhu J., Cheng S.-H. (2003) Analysis of additive and AE interaction effects of QTLs controlling plant height, heading date and panicle number in rice (Oryza sativa L.). Acta Genetica Sinica 30:899-906.
Zhang Y., Luo L., Xu C., Zhang Q., Xing Y. (2006) Quantitative trait loci for panicle size, heading date and plant height co-segregating in trait-performance derived near-isogenic lines of rice (Oryza sativa). Theor Appl Genet 113:361-8.
Zhu J. (2000) Mixed linear model approaches for analyzing genetic models of complex quantitative traits Journal of Zhejiang University - Science A 1:78-90.
Zhuang J.Y., Lin H.X., Lu J., Qian H.R., Hittalmani S., Huang N., Zheng K.L. (1997) Analysis of QTL x environment interaction for yield components and plant height in rice. Theor Appl Genet. 95:799-808.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/44640-
dc.description.abstract抽穗期與株高是水稻相當重要的農藝性狀,此二性狀皆是由多對基因所調控的數量性狀,為瞭解各QTL 在不同環境中遺傳效應的變化,本試驗利用水稻品種臺稉2 號與臺中秈10 號的雜交後代263 個F2:4的家系在三個環境兩個期作中定位 QTLs。
利用多重區間定位法 (multiple interval mapping),共定位到11 個與抽穗期有 關的基因座,分佈在第1 條、第2 條、第3 條、第4 條、第5 條、第7 條、第8 條與第10 條染色體上,各QTL 對抽穗期性狀的外表型變異解釋量為1.5 ~ 62.0 %; 定位到4 個與株高有關的基因座,分佈在第1 條、第2 條、第6 條與第10 條染色 體上,各QTL 對株高外表型變異的解釋量為1.7 ~ 49.9 %。控制兩性狀的基因效應 方向在親本內是分散的,因此後代重組產生的分離族群有表現超越親本分離的現 象。兩性狀的主效基因qHD10 與qPH1 在各環境間表現穩定;部分QTL 與環境產生交感,qHD3 在一期作的效應較二期作效應大;qHD8a 在臺北一期作相較於其他 定位到的環境有明顯的表現;其它定位到的QTL 皆為微效基因,易受環境影響導 致遺傳效應不穩定。
多重環境下定位QTL 可以進一步瞭解QTL 與環境的交感,將QTL 的遺傳效應區分為純遺傳效應和基因與環境交感效應,這是在單一環境定位QTL 所無法做到的。穩定表現的QTL 可以應用在廣泛區域的育種上,與特定環境具有交感或變 化一致的QTL 則可以在地區品種的育種上使用。在多環境下定位QTL 的結果,無論對於未來分子標誌輔助選種的評估,或是目標性狀導入優良品種,皆具有參考的價值。
zh_TW
dc.description.abstractHeading date and plant height are important agronomic traits in rice. Both traits are quantitative traits which are controlled by multiple genes. In this study, a rice F2:4 population consisting of 263 lines was derived from a cross between japonica variety Taiken 2 and indica variety Taichung Sen 10. The F2:4 population were grown in 3 location in 2 seasons to map QTL (quantitative trait loci).
The stcitistical method to detect QTL is multiple interval mapping. The result showed, in heading date, totally 11 QTLs which distributed on chromosome 1, 2, 3, 4, 5 ,7 ,8 and 10. The phenotypic variation explained (PVE) of these QTL are 1.5 ~ 62.0 %. In plant height, 4 QTLs were detected and distributed on chromosome 1, 2, 6 and 10.The PVE of these QTL are 1.7% ~ 49.9 %. The genetic effects of QTLs in parents were dispersed, leading to transgressive inheritance. These results indicated that the genetic effect of major QTL,qHD10 and qPH1, were stable in different environments However some QTL were influenced by QTL × environment effect (QE effect). The genetic effect of qHD3 in the first season was stronger than the second season, and the genetic effect of qHD8a in Taipei in the first season was stronger than other environments. All the other QTLs were minor QTLs and their genetic effect were unstable in different environments.
Mapping QTL under multiple environments could realize QE effect,and divided genetic effect into pure QTL effect and QE effect. In breeding program, the stable QTL could use in all environment, and the QTL which had QE effect could use for local variety. This study provided the information for marker assisted selection and marker assisted introgression.
en
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Previous issue date: 2010
en
dc.description.tableofcontents目錄
第1 章 前言 .............................................................................................. 1
第2 章 前人研究 ...................................................................................... 3
第一節 抽穗期研究 .......................................................................................... 3
第二節 株高研究 .............................................................................................. 6
第四節 數量性狀基因座與環境 ...................................................................... 8
第3 章 材料與方法 ................................................................................ 12
第一節 試驗材料 ............................................................................................ 12
第二節 栽培環境 ............................................................................................ 14
第三節 外表性狀調查 .................................................................................... 17
第四節 基因型分析 ........................................................................................ 18
第五節 QTL 分析 ........................................................................................... 21
第4 章 結果 ............................................................................................ 23
第一節 外表型分析 ........................................................................................ 23
第二節 基因型分析 ........................................................................................ 33
第三節 數量性狀基因座定位 ........................................................................ 35
第5 章 討論 ............................................................................................ 53
第6 章 結語 ............................................................................................ 59
參考文獻 ..................................................................................................... 60
附錄 ............................................................................................................. 66
dc.language.isozh-TW
dc.title多環境下水稻抽穗期與株高之數量性狀基因座定位zh_TW
dc.titleMapping quantitative trait loci conferring heading date and plant height of rice under multiple environmentsen
dc.typeThesis
dc.date.schoolyear98-2
dc.description.degree碩士
dc.contributor.oralexamcommittee陳凱儀,林彥蓉
dc.subject.keyword水稻,數量性狀基因座,抽穗期,株高數量性狀基因座與環境交感,zh_TW
dc.subject.keywordOryza sativa,Quantitative trait loci,Heading date,Plant height,QTL-by-Environment Interaction,en
dc.relation.page70
dc.rights.note有償授權
dc.date.accepted2010-07-09
dc.contributor.author-college生物資源暨農學院zh_TW
dc.contributor.author-dept農藝學研究所zh_TW
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