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DC 欄位 | 值 | 語言 |
---|---|---|
dc.contributor.advisor | 王金和 | |
dc.contributor.author | Nai-Huei Wu | en |
dc.contributor.author | 吳乃慧 | zh_TW |
dc.date.accessioned | 2021-06-15T01:35:02Z | - |
dc.date.available | 2011-07-23 | |
dc.date.copyright | 2009-07-23 | |
dc.date.issued | 2009 | |
dc.date.submitted | 2009-07-17 | |
dc.identifier.citation | Aly, M.M., Smith, E.J. and Fadly, A.M., 1993. Detection of reticuloendotheliosis virus infection using the polymerase chain reaction. Avian Pathol 22, 543-54.
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dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/43061 | - |
dc.description.abstract | 家禽網狀內皮增生症病毒(Avain reticuloendotheliosis virus, REV)可自然感染多種鳥禽類,包括台灣主要的經濟動物雞、鴨與鵝,雖然被感染的家禽於臨床上並未出現明顯的病徵,卻會引起飼養戶很大的經濟損失。目前網狀內皮增生症(reticuloendotheliosis)於現場尚未有有效預防及控制的方法,因此,本研究之目的為開發檢測REV抗原及抗體之酵素連結免疫吸附法(ELISA),將此經濟、快速、準確的檢測方式應用於快速診斷;並針對台灣水禽病例嘗試分離REV,藉由序列分析推估其親源關係;同時亦對本實驗室現有的三株抗體進行抗原決定位分析(epitope mapping),評估三株單株抗體辨識REV之能力。本研究共建立三種ELISA:以抗REV單株抗體及多株抗體分別作為捕捉抗體及偵測抗體,開發間接型抗原捕捉ELISA (iAC-ELISA)來偵測檢體中之REV抗原;此外,分別以原核系統表現REV之封套蛋白及p30蛋白作為塗鍍抗原,建立阻斷型ELISA及間接型ELISA來偵測血清中的抗REV抗體。本研究總共自水禽分離到4株REV,這些分離株無論是env或LTR序列以親源樹圖分析皆屬於同一群,此外我們也在鵝隻的腫瘤組織中偵測到與部份v-rel基因相似的序列;在抗原決定位分析方面,三株單株抗體所辨識的區域皆是屬於REV封套蛋白基因的高保留序列區;在偵測REV抗原方面,iAC-ELISA確實可以辨別病毒液中之REV;同為檢測REV抗體之阻斷型ELISA與間接型ELISA,兩者與商品化ELISA kit所判讀之結果相關性皆很高(98.7及96.7%)。因此,可利用本研究所建立之ELISA檢測REV抗原及抗體,做為田間調查及快速診斷之有效工具。 | zh_TW |
dc.description.abstract | Nature hosts of avian reticuloendotheliosis virus (REV) infection include chickens, ducks and geese, which are the main commercial poultry in Taiwan. Without treatment and control procedures for reticuloendotheliosis, the effect of impair immune responses against many pathogens by REV can procure severe economic losses in commercial poultry. The purpose of this study was to develop rapid, convenient and economic methods for detecting REV antigen and antibody. Virus isolation, sequencing, and phylogenetic analysis were performed for goose and duck REVs. The epitopes that the three monoclonal antibodies (mAbs) identified were also determined by using three different prokaryotic expression env proteins. For antigen detection, an indirect antigen capture enzyme-linked immunosorbent assay (iAC-ELISA) was developed with a mAb as the capture antibody and a polyclonal antibody as the detector antibody. For antibody detection, a prokaryotic expression env protein and p30 protein were coated in a blocking enzyme-linked immunosorbent assay (ELISA) and an indirect ELISA, respectively. After 2 passages in DF1 cell, four REVs were isolated from geese and ducks and their env and long terminal repeat sequences were closely related to each other. In addition, a partial v-rel-like sequence was detected in a goose tumor. All the three mAbs could identify the env conserved region of REVs from chickens and geese. For antigen detection, REVs from chickens, geese and ducks could be identified by the iAC-ELISA. For Antibody detection, both the blocking ELISA and the indirect ELISA were highly relative to the commercial ELISA kit with 98.7% and 96.7% agreements, respectively. In conclusion, these methods could be used for anti-REV antibody and antigen detections in the field. | en |
dc.description.provenance | Made available in DSpace on 2021-06-15T01:35:02Z (GMT). No. of bitstreams: 1 ntu-98-R96629004-1.pdf: 12679887 bytes, checksum: 746f121cf57d25034209bdab7c7dfa2e (MD5) Previous issue date: 2009 | en |
dc.description.tableofcontents | 誌謝 Ⅰ
中文摘要 Ⅱ 英文摘要 Ⅲ 目錄 Ⅳ 圖次 ⅩⅠ 表次 ⅩⅢ 附錄 ⅩⅣ 第一章 序言 1 第二章 文獻探討 3 第一節 簡介與歷史背景 3 第二節 病毒特性與型態 3 第三節 病毒結構與功能 4 2-3.1 病毒基因體 4 2-3.2 致癌基因 5 2-3.3 病毒蛋白質 5 2-3.4 基因上未轉碼的區域 6 第四節 病毒複製 6 2-4.1 形成provirus 6 3-4.2 病毒的轉錄與轉譯 7 第五節 病毒物理化學特性 7 第六節 宿主 7 第七節 致病機轉與病理變化 8 2-7.1 潛伏期 8 2-7.2 臨床症狀 8 2-7.3 病理變化 9 第八節 流行病學 9 2-8.1 傳播途徑 9 2-8.2 台灣地區情形 11 第九節 診斷方式 11 2-9.1 病毒分離 11 2-9.2 分子生物學診斷 12 2-9.3 血清學診斷 12 第十節 單株抗體 12 第十一節 酵素連結免疫吸附法(ELISA) 13 2-11.1 偵測抗體的indirect ELISA 14 2-11.2 偵測抗體的阻斷型(blocking) ELISA 14 2-11.3 偵測抗原的sandwich ELISA 14 第三章 材料與方法 16 第一節 REV病毒分離與序列分析 16 3-1.1 病毒核酸之檢測 16 3-1.1.1 病材採樣 16 3-1.1.1.1 血液樣本採樣 16 3-1.1.1.2 腫瘤組織採樣及乳劑製作 16 3-1.1.2 以聚合酶鏈鎖反應(PCR)偵測REV前病毒(provirus)核酸 16 3-1.1.2.1 DNA萃取 16 3-1.1.2.2 以PCR增幅REV provirus核酸 17 3-1.1.2.3 洋菜膠電泳分析 18 3-1.1.2.4 RNA萃取 18 3-1.1.2.5 反轉錄聚合酶鏈鎖反應(RT-PCR) 19 3-1.1.3 以PCR偵測馬立克氏病病毒核酸 19 3-1.1.3.1 DNA萃取 19 3-1.1.3.2 以PCR增幅MDV核酸 19 3-1.1.3.3 洋菜膠電泳分析 19 3-1.1.4 以PCR偵測ALSV provirus核酸 20 3-1.1.4.1 DNA萃取 20 3-1.1.4.2 以PCR增幅ALSV provirus核酸 20 3-1.1.4.3 洋菜膠電泳分析 20 3-1.2 以DF-1細胞株分離REV 20 3-1.2.1 解凍細胞 20 3-1.2.2 細胞培養 21 3-1.2.3 計算細胞數目 21 3-1.2.4 病毒分離 22 3-1.2.5 偵測病毒核酸 22 3-1.2.5.1 萃取病毒RNA 22 3-1.2.5.2 以RT-PCR偵測病毒核酸 22 3-1.2.6 病毒增殖 22 3-1.2.7 冷凍細胞 22 3-1.3 REV基因序列比對分析 23 3-1.3.1 封套蛋白基因(env) 23 3-1.3.1.1 以PCR增幅env基因 23 3-1.3.1.2 PCR產物之純化 23 3-1.3.1.3 env基因之選殖 24 3-1.3.1.4 序列比對及親緣樹分析 25 3-1.3.2 Long terminal repeat (LTR) 26 3-1.3.2.1 引子 26 3-1.3.2.2 以PCR增幅LTR 26 3-1.3.2.3 核苷酸定序 26 3-1.3.2.4 序列比對及親緣樹分析 27 第二節 單株抗體 27 3-2.1 單株抗體 27 3-2.1.1 單株抗體製備 27 3-2.1.2 單株抗體純化 28 3-2.1.2.1 以蛋白質A瓊脂糖凝膠(Protein A Sepharose)純化單株抗體 28 3-2.1.2.2 透析純化之單株抗體 28 3-2.1.3 蛋白質定量 28 3-2.2 分析單株抗體之抗原性 29 3-2.2.1 抗原製備 29 3-2.2.1.1 病毒增殖 29 3-2.2.1.2 病毒濃縮與純化 29 3-2.2.2 以免疫墨點法(Immunodot blot assay)分析 30 3-2.2.3 以indirect ELISA分析 30 3-2.3 分析單株抗體所辨識之抗原決定位(epitope mapping) 31 3-2.3.1 基因片段的選殖與表現載體之構築 31 3-2.3.1.1 增幅小片段之封套蛋白基因 31 3-2.3.1.2 嵌入物(insert)之製備 32 3-2.3.1.3 載體(vector)之製備 32 3-2.3.1.4 限制酵素作用(digestion) 32 3-2.3.1.5 接合反應(ligation) 33 3-2.3.1.6 重組質體之轉型作用(transformation) 33 3-2.3.1.7 重組質體之確認與定序 34 3-2.3.1.8 重組質體之序列分析 34 3-2.3.2 以原核表現系統表現重組蛋白 34 3-2.3.2.1 重組質體之抽取 34 3-2.3.2.2 勝任細胞(competent cell)的製備 34 3-2.3.2.3 重組質體之表現 35 3-2.3.2.4 重組蛋白之電泳分析與確認 35 3-2.3.2.5 分析單源抗體辨識之抗原決定位 36 第三節 開發偵測REV抗原之indirect antigen capture ELISA (iAC-ELISA) 37 3-3.1 REV抗原製備 37 3-3.1.1 病毒增殖 37 3-3.1.2 病毒力價測定 37 3-3.1.2.1 接種病毒 37 3-3.1.2.2 聚合酶鏈反應 38 3-3.1.2.3 洋菜膠電泳分析 38 3-3.1.2.4 計算病毒力價 38 3-3.2 iAC-ELISA之開發 38 3-3.2.1 capture Ab及detector Ab 38 3-3.2.2 iAC-ELISA最佳化 39 3-3.2.3 iAC-ELISA之敏感性及特異性分析 40 第四節 開發偵測REV抗體之ELISA 40 3-4.1 阻斷型ELISA之開發 40 3-4.1.1 重組封套蛋白的表現與確認 40 3-4.1.1.1 表現載體之構築 40 3-4.1.1.1.1 增幅基因 40 3-4.1.1.1.2 嵌入物(insert)之製備 41 3-4.1.1.1.3 載體(vector)之製備 41 3-4.1.1.1.4 限制酵素作用(digestion) 41 3-4.1.1.1.5 接合反應(ligation) 41 3-4.1.1.1.6 重組質體之轉型作用(transformation) 42 3-4.1.1.1.7 重組質體之確認與定序 42 3-4.1.1.1.8 重組質體之序列分析 42 3-4.1.1.2 以原核表現系統表現重組蛋白 42 3-4.1.1.2.1 重組質體之抽取 42 3-4.1.1.2.2 重組質體之表現 42 3-4.1.1.2.3 重組蛋白之電泳分析與確認 43 3-4.1.1.2.4 恢復重組蛋白構型(refolding) 44 3-4.1.1.2.5 檢視商品化多株抗體與重組蛋白結合能力 44 3-4.1.2 製備阻斷型ELISA tracer 45 3-4.1.2.1 檢視單株抗體與REV全病毒結合能力 45 3-4.1.2.2 檢視單株抗體與重組蛋白結合能力 45 3-4.1.2.3 單株抗體標示過氧化氫酶(horseradish peroxidase,HRP) 46 3-4.1.3 阻斷型ELISA最佳化 46 3-4.1.3.1 以棋盤方格法找出阻斷型ELISA條件 46 3-4.1.3.2 阻斷型ELISA最佳化條件 47 3-4.1.4 最佳化阻斷型ELISA cut-off值 47 3-4.1.4.1 雞隻田間血清及血漿樣本收集 47 3-4.1.4.1.1 血清樣本採集 47 3-4.1.4.1.2 血漿樣本採集 47 3-4.1.4.2 REV抗體檢測 48 3-4.1.4.3 計算最佳化阻斷型ELISA cut-off值 48 3-4.1.4.3.1 以Receiver Operating Characteristic曲線(ROC Curves) 決定cut-off值 48 3-4.1.4.3.2 以平均值標準差計算cut-off值 49 3-4.2 間接型ELISA之開發 49 3-4.2.1 重組蛋白鞘蛋白(capsid protein; p30)的表現與確認 49 3-4.2.1.1 表現載體之構築 49 3-4.2.1.1.1 增幅基因 49 3-4.2.1.1.2 嵌入物(insert)之製備 49 3-4.2.1.1.3 載體(vector)之製備 50 3-4.2.1.1.4 限制酵素作用(digestion) 50 3-4.2.1.1.5 接合反應(ligation) 50 3-4.2.1.1.6 重組質體之轉型作用(transformation) 50 3-4.2.1.1.7 重組質體之確認與定序 50 3-4.2.1.1.8 重組質體之序列分析 50 3-4.2.1.2 以原核表現系統表現重組蛋白 51 3-4.2.1.2.1 重組質體之抽取 51 3-4.2.1.2.2 重組質體之表現 51 3-4.2.1.2.3 重組蛋白之電泳分析與確認 51 3-4.2.1.2.4 重組蛋白之純化 52 3-4.2.1.2.5 蛋白質定量 53 3-4.2.1.2.6 純化之p30重組蛋白電泳分析與確認 53 3-4.2.2 間接型ELISA 53 3-4.2.2.1 檢視商品化多株抗體與重組蛋白結合能力 53 3-4.2.2.2 以棋盤方格法找出indirect ELISA之最佳化條件 54 3-4.2.2.3 最佳化indirect ELISA cut-off值 54 3-4.2.2.3.1 雞隻田間血清樣本收集 54 3-4.2.2.3.2 REV抗體檢測 54 3-4.2.2.3.3 計算最佳化indirect ELISA cut-off值 55 第四章 結果 56 第一節 REV病毒分離與序列分析 56 4-1.1 REV病毒核酸之檢測 56 4-1.1.1 鴨之病例介紹 56 4-1.1.1.1 偵測前病毒核酸 56 4-1.1.1.2 偵測病毒核酸 56 4-1.1.2 鵝之病例介紹 56 4-1.1.2.1 偵測前病毒核酸 57 4-1.1.2.2 偵測病毒核酸 57 4-1.1.3 以PCR偵測MDV核酸 58 4-1.1.4 以PCR增幅ALSV provirus核酸 58 4-1.2 以DF-1細胞株分離REV 58 4-1.3 REV基因序列比對分析 58 4-1.3.1 選殖封套蛋白基因(env) 58 4-1.3.2 封套蛋白基因之序列比對及親緣樹分析 59 4-1.3.3 LTR片段之增幅 60 4-1.3.4 LTR之序列比對及親緣樹分析 60 第二節 單株抗體 60 4-2.1 單株抗體 60 4-2.1.1 單株抗體製備 61 4-2.1.2 單株抗體純化與定量 61 4-2.2 分析單株抗體之抗原性 61 4-2.2.1 病毒濃縮與純化 61 4-2.2.2 以免疫墨點法分析 61 4.2.2.3 以indirect ELISA分析 62 4-2.3 分析單株抗體所辨識之抗原決定位 (epitope mapping) 62 4-2.3.1 基因片段的選殖與表現載體之構築 62 4-2.3.1.1 增幅小片段之封套蛋白基因 62 4-2.3.1.2 重組載體的構築與確認 62 4-2.3.2 以原核表現系統表現重組蛋白 63 4-2.3.3 分析單源抗體辨識之抗原決定位 63 4-2.3.4 序列比對 64 第三節 偵測REV抗原之indirect antigen capture ELISA (iAC-ELISA) 64 4-3.1 病毒力價測定 64 4-3.2 iAC-ELISA之開發 64 4-3.2.1 capture Ab及detector Ab 64 4-3.2.2 iAC-ELISA最佳化 65 4-3.2.3 iAC-ELISA之敏感性及特異性分析 65 4-3.2.4 以田間血清來評估iAC-ELISA 65 第四節 開發偵測REV抗體之ELISA 66 4-4.1 阻斷型ELSIA之開發 66 4-4.1.1 以原核系統表現REV部分封套蛋白 66 4-4.1.1.1 REV部分封套蛋白基因之選殖 66 4-4.1.1.2 重組載體的構築與確認 66 4-4.1.1.3 重組蛋白r3122env之確認與特異性分析 66 4-4.1.1.3.1 重組蛋白r3122env之表現與確認 66 4-4.1.1.3.2 恢復重組蛋白構型(refolding) 67 4-4.1.1.3.3 檢視商品化多株抗體與重組蛋白結合能力 68 4-4.1.2 製備阻斷型ELISA tracer 68 4-4.1.2.1 檢視單株抗體與REV全病毒與重組蛋白結合能力 68 4-4.1.2.2 單株抗體標示過氧化氫酶(HRP) 68 4-4.1.3 阻斷型ELISA 最佳化 68 4-4.1.3.1 以棋盤方格法找出阻斷型ELISA條件 68 4-4.1.3.2 阻斷型ELISA最佳化條件 69 4-4.1.4 最佳化阻斷型ELISA cut-off值 69 4-4.2 間接型ELISA之開發 70 4-4.2.1 以原核系統表現REV鞘蛋白(capsid protein; p30) 70 4-4.2.1.1 REV p30基因之選殖 70 4-4.2.1.2 重組質體的建構與確認 70 4-4.2.1.3 重組蛋白p30之確認 70 4-4.2.1.3.1 重組蛋白p30之表現與確認 70 4-4.2.1.3.2 重組蛋白p30之純化 71 4-4.2.2 塗鍍p30重組蛋白之間接型ELISA 71 4-4.2.2.1 檢視商品化多株抗體與重組蛋白結合能力 71 4-4.2.2.2 以棋盤方格法找出indirect ELISA之最佳化條件 72 4-4.2.2.3 以田間血清比較ELISA kit與開發之indirect ELISA 72 4-4.2.2.4 計算最佳化indirect ELISA之cut-off值 72 第五章 討論 73 第六章 參考文獻 84 圖次 Figure 1 REV strain A及strain T基因結構示意圖 97 Figure 2 ELISA原理示意卡通圖 98 Figure 3 REV chicken/3122/03小片段封套蛋白基因選殖示意圖 99 Figure 4 REV goose/3410/06蛋白鞘蛋白基因選殖示意圖 100 Figure 5 病例3461、3471、3472及3473之肉眼病變 101 Figure 6 病例3461、3471、3472及3473之組織病理學檢查 102 Figure 7 以特異性之引子對利用PCR及RT-PCR分別偵測REV前病毒及 病毒核酸 105 Figure 8 以RT-PCR檢測細胞上清液中之REV病毒核酸 106 Figure 9 利用特異性之引子對增幅REV LTR及env基因並進行定序 106 Figure 10 REV env胺基酸序列比對結果 107 Figure 11 REV goose/3472/08與NCBI網站中所發表之REV strain T v-rel oncogene核苷酸序列比對結果 111 Figure 12 REV LTR核苷酸序列比對結果 114 Figure 13 REV env核苷酸及胺基酸序列之親源樹分析 117 Figure 14 REV LTR核苷酸序列之親源樹分析 118 Figure 15 病毒濃縮 119 Figure 16 以免疫墨點法分析3株單株抗體是否能辨識REV 119 Figure 17 以indirect ELISA檢視單株抗體辨識濃縮純化REV全病毒之能力 120 Figure 18 以自行設計之引子對增幅之REV chicken/3122/03部份封套蛋白基因片段 120 Figure 19 利用西方墨點法分析單源抗體辨識之抗原決定位 121 Figure 20 將REV env胺基酸序列進行比對,發現單株抗體mAb1所辨識之區域為一保留區。約為胺基酸位置497-561 122 Figure 21 將REV env胺基酸序列進行比對,發現單株抗體mAb2及mAb3辨識之區域為一保留區。約為胺基酸位置364-397 122 Figure 22 選出iAC-ELISA最適合之capture Ab及detector Ab之配對 123 Figure 23 iAC-ELISA特異性分析 124 Figure 24 iAC-ELISA敏感性分析 125 Figure 25 利用iAC-ELISA來檢測田間血清 126 Figure 26 r3122env重組蛋白表現與確認 127 Figure 27 Western blotting分析r3122env重組蛋白抗原性 128 Figure 28 以indirect ELISA檢視anti-REV多株抗體辨識重組蛋白之能力 129 Figure 29 以direct ELISA檢視mAb1-HRP及mAb3-HRP辨識全病毒及 重組蛋白之能力 130 Figure 30 以阻斷型ELISA檢測80個樣本所得之A450值分佈 131 Figure 31 利用特異性引子p30-F/p30-R經PCR反應增幅REV goose/3410/06 p30基因之電泳圖(732 bp) 132 Figure 32 p30重組蛋白表現與純化 133 Figure 33 Western blotting分析p30重組蛋白抗原性 134 Figure 34 以indirect ELISA檢視表現之p30重組蛋白 135 Figure 35 取田間血清分別以商品化ELISA kit與塗鍍p30重組蛋白之indirect ELISA進行檢測 135 Figure 36 取60個REV Ab陰性樣本進行indirect ELISA檢測來計算 cut-off值 136 Figure 37 Goose/3472/08以env5/mRenR引子對以PCR及RT-PCR增幅之電泳圖結果 136 表次 Table 1 本論文所使用之特異性引子列表 137 Table 2 REV env之核苷酸及胺基酸序列相似度 140 Table 3 REV goose/3472/08與Reticuloendotheliosis virus strain T v-rel oncogene 核苷酸序列相似度 141 Table 4 REV LTR核苷酸序列相似度 142 Table 5 以80個血清樣本畫出ROC curve並計算其cut-off value 143 Table 6 比較各種不同方法所計算之阻斷型ELISA cut-off值差異 144 附錄 Appendix 1. 本論文所使用的marker 145 Appendix 2. 血清資料 146 | |
dc.language.iso | zh-TW | |
dc.title | 家禽網狀內皮增生症病毒酵素連結免疫吸附法診斷試劑之開發 | zh_TW |
dc.title | Development of Enzyme-Linked ImmunoSorbent Assay (ELISA) for Detecting Avian Reticuloendotheliosis Viruses | en |
dc.type | Thesis | |
dc.date.schoolyear | 97-2 | |
dc.description.degree | 碩士 | |
dc.contributor.oralexamcommittee | 謝快樂,沈瑞鴻,陳秋麟,張伯俊 | |
dc.subject.keyword | 家禽網狀,內皮增生症病毒,病毒分離,序列分析,單株抗體,抗原決定位分析,間接抗原捕捉型酵素連結免疫吸附法,阻斷型酵素連結免疫吸附法,間接型酵素連結免疫吸附法, | zh_TW |
dc.subject.keyword | avain reticuloendotheliosis virus,virus isolation,sequence analysis,monoclonal antibodies,epitope mapping,indirect antigen-capture ELISA,blocking ELISA,indirect ELISA, | en |
dc.relation.page | 146 | |
dc.rights.note | 有償授權 | |
dc.date.accepted | 2009-07-17 | |
dc.contributor.author-college | 獸醫專業學院 | zh_TW |
dc.contributor.author-dept | 獸醫學研究所 | zh_TW |
顯示於系所單位: | 獸醫學系 |
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