請用此 Handle URI 來引用此文件：
http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/41979完整後設資料紀錄
| DC 欄位 | 值 | 語言 |
|---|---|---|
| dc.contributor.advisor | 趙聖德(Sheng-Der Chao) | |
| dc.contributor.author | Shou-Cheng Huang | en |
| dc.contributor.author | 黃守正 | zh_TW |
| dc.date.accessioned | 2021-06-15T00:40:16Z | - |
| dc.date.available | 2011-10-15 | |
| dc.date.copyright | 2008-10-15 | |
| dc.date.issued | 2008 | |
| dc.date.submitted | 2008-10-01 | |
| dc.identifier.citation | [1] O. S. Tyagi, H. S. Bisht, and A. K. Chatterjee, J. Phys. Chem. B 108, 3010 (2004).
[2] P. Hobza and R. Zahradnik, Intermolecular Complexes : the role of van der Waals systems in physical chemistry and in the biodisciplines (Elsevier, New York, 1988). [3] G. A. Jeffrey and W. Saenger, Hydrogen Bonding in Biological Structures (Springer-Verlag, Berlin, 1991). [4] A. J. Stone, The Theory of Intermolecular Forces (Oxford University Press, Oxford, 1996). [5] A. K. Rappe and E. R. Bernstein, J. Phys. Chem. A 104, 6117 (2000). [6] G. Chalasinski and M. M. Szczesniak, Chem. Rev. 100, 4227 (2000). [7] R. J. Wheatley, A. S. Tulegenov, and E. Bichoutskaia, Int. Rev. Phys. Chem. 23, 151 (2004). [8] Y. Zhao and D. G. Truhlar, J. Chem. Theory Comput. 1, 415 (2005). [9] S. Grimme, J. Comp. Chem. 25, 1463 (2004). [10] R. A. Friesner, Proc. Natl. Acad. Sci. 102, 6648 (2005). [11] D. Frenkel and B. Smit, Understanding Molecular Simulations (Academic Press, New York, 2002). [12] M. Marques and E. Gross, Annual Rev. Phys. Chem. 55, 427 (2004). [13] A. Ruzsinszky, J. P. Perdew, and G. I. Csonka, J. Phys. Chem. A 109, 11015 (2005). [14] Narten, A. H., Danford, M. D., and Levy, H A., 1967, J. Chem. Phys., 46, 4875. [15] Narten, A. H.,1976, J. Chem. Phys., 65, 573. [16] Nishikawa, K., Tohji, K., Shima, M., and Murata, Y., 1979, Chem. Phys. Lett., 64,154. [17] Egelstaff, P. A., Page, D. I., and Powles, J. G., 1971, Molec. Phys., 20, 881. [18] Van Tricht, J. B., 1977, J. Chem. Phys., 66, 85. [19] Misawa, M., 1989, J. Chem. Phys., 91, 5648. [20] Pusztai, L., and McGreevy, R. L., 1997, Molec. Phys., 90, 533. [21] P. Jóvári, G. Mészáros., L. Pusztai, and E. Sváb., J. Chem. Phys. 114, 8082(2001) [22] J. C. Soeten., and G. Jansen., 1999, Molec. Phys., 96, 533. [23] S. Tsuzuki, T. Uchimaru, K. Tanabe, and S. Kuwajima, J. Phys. Chem. 98, 1830 (1994). [24] S. Tsuzuki and H. P. Luthi, J. Chem. Phys. 114, 3949 (2001). [25] J. Nagy, D. F. Weaver, and V. H. Smith, Mol. Phys. 85, 1179 (1995). [26] E. Fraschini and A. J. Stone, J. Comput. Chem. 19, 847 (1998). [27] S. Tsuzuki, T. Uchimaru, and K. Tanabe, Chem. Phys. Lett. 287, 202 (1998). [28] S. Tsuzuki, K. Honda and T. Uchimaru, M. Mikami, J. Chem. Phys. 124, 114304 (2006). [29] R. Mahlanen., J. P. Jalkanen., T. A. Pakkanen. Chem. Phys. 313, 271 (2005). [30] Mike Sutton, “Getting the numbers right – the lonely struggle of Rydberg” Chemistry World, Vol. 1, No. 7, July 2004. [31] JJ Thomson (1897), Cathode rays, Philosophical Magazine, 44, 293 — Discovery of the electron. [32] JJ Thomson (1913), Rays of positive electricity, Proceedings of the Royal Society, A 89, 1-20 — Discovery of neon isotopes. [33] E. Rutherford , 'The Scattering of α and β Particles by Matter and the Structure of the Atom',Philos. Mag., vol 6, pp.21, 1909. [34] Niels Bohr. On the Constitution of Atoms and Molecules. Phil.Mag. 26(1913)1. [35] L. de Broglie, Phil. Mag. 47, 446 (1924). [36] Gaussian 03, Revision D.02, Frisch, M. J. et al.; Gaussian, Inc., Wallingford CT, 2004. [37] A. Szabo, N. S. Ostlund, Modern Quantum Chemistry. Introduction to Advanced Electronic Structure Theory (Dover, New York, 1996). [38] R. Krishnan, J. S. Binkley, R. Seeger, J. A. Pople, J. Chem. Phys. 72, 650 (1980) [39] T. H. Dunning, Jr., J. Chem. Phys. 90, 1007 (1989). [40] S. F. Boys and F. Bernardi, Mol. Phys. 19, 553 (1970). [41] D. Feller, J. Chem. Phys. 96, 6104 (1992). [42] T. Helgaker, W. Klopper, H. Koch, J. Noga, J. Chem. Phys. 106, 9639 (1997). [43] W. H. Press, S. A. Teukolsky, W. T. Vetterling, and B. P. flannery, Numerical Recipe in C (Cambridge University Press, Cambridge, 1996). [44] A. D. Becke, Phys. Rev. A 38, 3098 (1988). [45] A. D. Boese and N. C. Handy, J. Chem. Phys. 114, 5497; see also the supp. material: EPAPS Document No. E-JCPA6-114-301111 (2001). [46] C. Adamo and V. Barone, J. Chem. Phys. 108, 664 (1998). [47] J. Tao, J. P. Perdew, V. N. Staroverov, and G. E. Scuseria, Phys. Rev. Lett. 91, 146401 (2003). [48] J. P. Perdew, K. Burke, and M. Ernzerhof, Phys. Rev. Lett. 77, 3865 (1996). [49] K. Burke, J. P. Perdew, and Y. Wang, in Electronic Density Functional Theory: Recent Progress and New Directions, Ed. J. F. Dobson, G. Vignale, and M. P. Das (Plenum, 1998). [50] W. Kohn and L. J. Sham, Phys. Rev. 140, A1133 (1965). [51] J. C. Slater, Quantum Theory of Molecular and Solids. Vol. 4: The Self-Consistent Field for Molecular and Solids (McGraw-Hill, New York, 1974). [52] S. H. Vosko, L. Wilk, and M. Nusair, Can. J. Phys . 58, 1200 (1980). [53] J. P. Perdew and A. Zunger, Phys. Rev. B 23, 5048 (1981). [54] S. H. Vosko, L. Wilk, and M. Nusair, Can. J. Phys . 58, 1200 (1980). [55] J. P. Perdew, Phys. Rev. B 33, 8822 (1986). [56] C. Lee, W. Yang, and R. G. Parr, Phys. Rev. B 37, 785 (1988). [57] A. H.-T. Li and S. D. Chao, Phys. Rev. A 73, 016701 (2006). [58] A. N. Campbell and R. M. Chatterjee, Can. J. Phys, 47, 3893 (1969). [59] A. H. Narten, J. Chem. Phys. 65, 573 (1976). [60] Chahid, A., Bermejo, F. J., Martinez, J. L., and Enciso, E., J. Condens. Matter, 4, 1213 (1992). [61] S. W. Chao, A. H. -T. Li and S. D. Chao, J. Chem. Phys. (2008). [62] S. Cohen, R. Powers and R. Rudman, Acta Cryst. B35, 1670 (1979). [63] THE ART OF MOLECULAR DYNAMICS SIMULATION, Second Edition, D. C. REPAPORT. | |
| dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/41979 | - |
| dc.description.abstract | 我們使用HF、MP2及DFT三種量子化學計算方法計算四氯化碳分子間作用力，HF主要計算排斥力的部分，MP2計算整體凡得瓦爾力，基底大小對於HF的影響不大，對於MP2卻有相反的結果。並比較基底加入BSSE修正前後的影響，接著使用exchange-correlation functional的80種配對組合來進行DFT的計算，並比較合種配對較為接近MP2之計算結果。
在完成量子化學計算後，使用4 Sites Lennard-Jones potential Model來進行ab initio計算的擬合，並建構出力場，再將擬合參數帶入分子動力學來進行模擬，模擬四氯化碳流體之結構特性、動態性值以及擴散係數，並與實驗相互比較。而模擬之結果有相當的準確度，說明由以量子力學做為出發點的分子動力學模擬，其在實用性上有一定的可靠度。此外，還針對甲烷分子進行擴散係數的分子動力學模擬，以了解模擬原子數對於擴散係數的影響。最後則討論位勢能間參數的轉換關係，由於擬合參數的好壞在分子動力學的模擬上佔了極大的因素，因此可透過轉換方式來改善擬合的結果。 | zh_TW |
| dc.description.abstract | We have calculated the interaction potentials of Carbon Tetrachloride dimers using the Hatree-Fock (HF) Self-Consistent theory, the correlation-corrected second-order Møller-Plesset (MP2) perturbation theory and the density functional theory (DFT). The main of HF calculations yield repulsive potentials, the MP2 calculations yield totally van der Waals interactions. The basis set number will occur to large influence to the HF calculations but the opposite results to MP2 calculations. Also compare the basis set superposition error (BSSE) corrected and uncorrected results. At last, we use eighty species of exchange-correlation functional to perform DFT calculations and the compare the results of MP2.
After complete the quantum chemistry calculations, we use 4 Sites Lennard-Jones potential Model to curve fitting with ab initio calculations. By the 4 Sites Model, we can get the parameters and construct a force field to pave a way for the next step of molecular dynamics simulations. To simulate the structure properties, the dynamics properties and the diffusion coefficient of liquid carbon tetrachloride, we perform NVT ensemble of molecular dynamics simulations. We compare the results with experiments from several references and the results are acceptable for us. These results demonstrate that quantum chemistry calculated intermolecular interaction is very well which can reproduce the molecular dynamics simulation results with good accurately. Besides, we also simulate the diffusion coefficient of liquid methane to understanding the effect of the number of atoms of diffusion coefficient. Finally, we discuss the relationship of parameter between two different potentials. For the most part, the fitting results control the key point of molecular dynamics simulation results, so we can improve the fitting results by using the way of parameters transformation. | en |
| dc.description.provenance | Made available in DSpace on 2021-06-15T00:40:16Z (GMT). No. of bitstreams: 1 ntu-97-R95543057-1.pdf: 5943635 bytes, checksum: 374371964046e13a3809f517772b0cfd (MD5) Previous issue date: 2008 | en |
| dc.description.tableofcontents | 致謝............ a
摘要........... II Abstract......... III 圖目錄......... VIII 表目錄......... XI 第一章 序論 1 1.1 前言 1 1.2 量子力學發展 5 1.3 量子力學的假設 13 第二章 基本理論介紹 18 2.1 多電子問題與薛丁格方程式 18 2.1.1 與時間無關的單電子薛丁格方程式 18 2.1.2 玻恩-奥本海默近似法(Born-Oppenheimer approximation) 19 2.1.3 軌道近似與斯萊特行列式(Slater determinant) 22 2.2 Ab initio分子軌域理論 24 2.2.1 Hartree-Fock(HF) approximation 24 2.2.2 微擾理論(Møller-Plesset perturbation theory) 29 2.2.3 密度泛函理論 Density functional theory(DFT) 34 2.3 分子動力學理論 38 2.3.1 基本原理 38 2.3.2 徑向分佈函數(Radial distribution function) 40 2.3.3 速度自相關函數(Velocity autocorrelation function)及擴散係數(Diffusion coefficient) 43 第三章 計算方法 47 3.1 四氯化碳雙體位勢能計算方法 47 3.2 4 Sites、5 Sites模型計算方法 50 3.3 勢能函數間之參數轉換方式 53 第四章 計算結果與討論 55 4.1 四氯化碳之ab initio計算結果 55 4.1.1 幾何結構最佳化 55 4.1.2 HF計算結果 55 4.1.3 MP2計算結果 59 4.1.4 Attraction計算結果 75 4.1.5 Basis Set Limit計算結果 75 4.1.6 DFT計算結果 79 4.2 4 Sites、5 Sites模擬結果 111 4.2.1 4 Sites Model模擬結果 111 4.2.2 5 Sites Model模擬結果 114 4.3 分子動力學部分 115 4.3.1 徑向分佈函數模擬之結果 115 4.3.2 速度自相關函數與擴散係數模擬之結果 118 4.3.3 粒子數對於擴散系數的影響 120 4.4 勢能函數間之參數轉換結果 121 4.4.1 Lennard-Jones potential與Morse potential間的轉換 121 4.4.2 Lennard-Jones potential與Buckingham potential間的轉換 123 4.4.3 Morse potential與Buckingham potential間的轉換 126 4.4.4 Morse potential與Lennard-Jones potential間的轉換 127 第五章 結論及未來展望 130 5.1 量子化學計算結論 130 5.2 分子動力學結論 132 5.3 未來展望 133 參考文獻......... 134 附錄A.............. 137 附錄B.............. 139 附錄C.............. 146 | |
| dc.language.iso | zh-TW | |
| dc.subject | 四氯化碳 | zh_TW |
| dc.subject | Gaussian 03套裝軟體 | zh_TW |
| dc.subject | 分子動力學模擬(MD) | zh_TW |
| dc.subject | 擴散係數 | zh_TW |
| dc.subject | 速度自相關函數(VAF) | zh_TW |
| dc.subject | 徑向分佈函數(RDF) | zh_TW |
| dc.subject | 密度泛函理論(DFT) | zh_TW |
| dc.subject | ller-Plesset(MP)微擾理論 | zh_TW |
| dc.subject | Mø | zh_TW |
| dc.subject | Hartree-Fock(HF)近似法 | zh_TW |
| dc.subject | Gaussian 03 package | en |
| dc.subject | Carbon Tetrachloride | en |
| dc.subject | Hatree-Fock (HF) approximation | en |
| dc.subject | Mø | en |
| dc.subject | ller-Plesset (MP) perturbation theory | en |
| dc.subject | Density Function Theory (DFT) | en |
| dc.subject | Radial distribution function (RDF) | en |
| dc.subject | Velocity autocorrelation function (VAF) | en |
| dc.subject | Diffusion coefficient | en |
| dc.subject | Molecular Dynamics Simulations | en |
| dc.title | 基於量子化學方法研究四氯化碳分子間位勢能及四氯化碳流體之分子動力學模擬 | zh_TW |
| dc.title | Based on Quantum Chemistry Method to Calculate Intermolecular Interactions and Molecular Dynamics Simulations of Carbon Tetrachloride Fluids | en |
| dc.type | Thesis | |
| dc.date.schoolyear | 97-1 | |
| dc.description.degree | 碩士 | |
| dc.contributor.coadvisor | 張正憲(Jeng-Shian Chang) | |
| dc.contributor.oralexamcommittee | 吳光鐘,陳俊杉 | |
| dc.subject.keyword | 四氯化碳,Hartree-Fock(HF)近似法,Mø,ller-Plesset(MP)微擾理論,密度泛函理論(DFT),徑向分佈函數(RDF),速度自相關函數(VAF),擴散係數,分子動力學模擬(MD),Gaussian 03套裝軟體, | zh_TW |
| dc.subject.keyword | Carbon Tetrachloride,Hatree-Fock (HF) approximation,Mø,ller-Plesset (MP) perturbation theory,Density Function Theory (DFT),Radial distribution function (RDF),Velocity autocorrelation function (VAF),Diffusion coefficient,Molecular Dynamics Simulations,Gaussian 03 package, | en |
| dc.relation.page | 147 | |
| dc.rights.note | 有償授權 | |
| dc.date.accepted | 2008-10-05 | |
| dc.contributor.author-college | 工學院 | zh_TW |
| dc.contributor.author-dept | 應用力學研究所 | zh_TW |
| 顯示於系所單位： | 應用力學研究所 | |
文件中的檔案：
| 檔案 | 大小 | 格式 | |
|---|---|---|---|
| ntu-97-1.pdf 未授權公開取用 | 5.8 MB | Adobe PDF |
系統中的文件，除了特別指名其著作權條款之外，均受到著作權保護，並且保留所有的權利。