請用此 Handle URI 來引用此文件:
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| DC 欄位 | 值 | 語言 |
|---|---|---|
| dc.contributor.advisor | 許明仁 | |
| dc.contributor.author | Wei-Zhu Shi | en |
| dc.contributor.author | 施瑋筑 | zh_TW |
| dc.date.accessioned | 2021-06-15T00:16:08Z | - |
| dc.date.available | 2011-06-23 | |
| dc.date.copyright | 2009-06-23 | |
| dc.date.issued | 2009 | |
| dc.date.submitted | 2009-06-08 | |
| dc.identifier.citation | 1. 王淑貞 (2007) 發展並應用高特異性 alcohol dehydrogenase
gene (type III) primer 快速檢測醋酸菌 嘉南藥理科技大學專 題研究計畫成果報告 嘉義 2. 原著:James M. Jay,方繼等編譯 (1999) 現代食品微生物學/第 五版 偉明圖書有限公司 台北 3. 水果及蔬菜汁飲料中可滴定酸度之檢驗方法,經濟部標準檢驗 局,CNS 3736 4. 李福臨 (2003) 綜論產業用微生物分類與鑑定之發展 食品工業 35(7):1-3 5. 李福臨 (2003) 微生物分類與鑑定之發展近況 食品工業 35(7): 4-17 6. 吳昱昇 (2006) 納豆發酵分離菌株之鑑定與其蛋白質分解酵素之 分析 私立輔仁大學生命科學系碩士論文 台北 7. 陳麗鈴 (2003) 醋酸菌菌種分類鑑定之研究 食品工業 35(7): 18-27. 8. 陳富民 (2007) 諾麗(Noni)果汁最佳發酵條件之探討 國立屏東科 技大學機械工程系碩士論文 屏東 9. 黃惠玲、李繼勇、蔣江云 (2003) 諾麗果中脂肪酸成分與含量的 分析 熱帶作物學報 24(1):73-75 10.曾美芳 (2004) 甜味種楊桃醃漬發酵過程中醃漬液菌相及成分變 化之研究 國立台灣大學園藝學研究所碩士論文 台北 11.Ampe, F., N. Ben Omar, C. Moizan, C. Wacher, J. P. Guyot. (1999) Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations. Applied and environmental microbiology. 65:5464-5473. 12.Avrahami, S., W. Liesack, R. Conrad. (2003) Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers. Environmental microbiology. 5:691-705. 13.Best, R. J. (1944) Studies on a fluorescent substance present in plants. 2. Isolation of the substance in a pure state and its identification as 6-methoxy-7-hydroxy 1: 2 benzo-pyrone. The Australian journal of experimental biology and medical science. 22:251-255. 14.Botstein, D., White, R. L., Skolnick, M., Davis, R. W. (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. The American Journal of Human Genetics. 32:314-331. 15.Brosius, J., T. L. Dull, D. D. Sleeter, H. F. Noller. (1981) Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. Journal of Molecular Biology. 148:107-127. 16.Blears, M. J., Grandis, S.D., Lee H., Trevors, J. T. (1998) Amplified fragment length polymorphism(AFLP):a review of the procedure and its applications. Journal of Industrial Microbiology and Biotechnology. 21:99-331. 17.Bano, N., J. T. Hollibaugh. (2002) Phylogenetic composition of bacterioplankton assemblages from the Artic Ocean. Applied and environmental microbiology. 68: 505-518. 18.Crump, B. C., G. W. Kling, M. Bahar, J. E. Hobbie. (2003) Bacter-ioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Applied and environmental microbiology. 69:2253- 2268. 19.Chunhieng, T., L. Hay, D. Montet. (2005) Detailed study of the juice composition of noni (Morinda citrifolia) fruits from Cambodia. Fruits. 60:13-24. 20.Chen, H. C., S. Y. Wang, M. J. Chen. (2008) Microbiological study of lactic acid bacteria in kefir grains by culture-dependent and culture-independent methods. Food Microbiology. 25:492-501. 21.Daniels, L., R. S. Hanson, and J. A. Phillips. (1994) Chemical analysis. Methods for General and Molecular Bacteriology. Washington, D. C. pp. 655-682. 22.David P. Clark and Lonnie D. Russell. (2000) Molecular Biology-made simple and fun 2/e. Cache River Press. U.S. 23.Danilo, E. (2004) PCR-DGGE fingerprinting: novel strategies for detection of microbes in food. Journal of Microbiological Methods. 56:297-314. 24.Gich, F., G. J. Garcia, J. Overmann. (2001) Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes. Archives of microbiology. 177(1):1-10. 25.Gray, N. D., I. P. Miskin, O. Kornilova, T. P. Curtis, I. M. Head. (2002) Occurrence and activity of Archea in aerated activated sludge wastewater treatment plants. Environmental microbiology. 4:158-168. 26.Hillis, D. M. and M. T. Dixon. (1991) Ribosomal DNA: molecular evolution and phylogenetic inference. The Quarterly review of biology. 66:411-453. 27.Krsek, M., E. M. H. Wellington. (1999) Comparison of different methods for the isolation and purificationof total community DNA from soil. Journal of microbiological methods. 39:1–16. 28.Levand, O. and Larson, H. O. (1979) Some chemical constituents of Morinda citrifolia. Planta medica. 36: 186-187. 29.Lise, Ø., L. Forney, F. L. Daae, V. Torsvik. (1997) Distribution of Bacterioplankton in Meromictic Lake Salenvannet, as Determined by Denaturing Gradient Gel Electrophoresis of PCR-Amplified Gene Fragments Coding for 16S rRNA. Applied and Environmental Microbiology. 63 (9):3367-3373. 30.Limyati, D. A., B. L. L. Juniar. (1998) Jamu Gendong, a kind of traditional medicine in Indonesia: the mi crobial contamination of its raw materials and endproduct. Journal of Ethnopharmacology. 63:201-208. 31.Luca C., A. Diez, R. Urso, K. Rantsiou, G. Comi, I. Bergmaier, C. Beimfohr. (2007) Optimization of conditions for profiling bacterial populations in food by culture-independent methods. International Journal of Food Microbiology. 120:100-109. 32.Myers, R. M., S. G. Fisher, L. S. Lerman, T. Maniatis. (1985) Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis. Nucleic Acid Research. 13:3131-3145. 33.Myers. R. M., T. Maniatis, L. S. Lerman. (1987) Detection and localization of single base changes by denaturing gradient gel electrophoresis. Methods in enzymology. 155:501-527. 34.Muyzer, G., De Waal, E. C., Uitterlinden, A. G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA. Applied and environmental microbiology. 59(3):695-700. 35.Muyzer, G., N. B. Ramsing. (1995) Molecular methods to study the organization of microbial communities. Water science and technology : a journal of the International Association on Water Pollution Research. 32(8):1-9 36.Noll, F. (1974) L-(+)-Lactate: determination with LDH, GPT, and NAD. In: H.U. Bergmeyer (Ed). Methods of Enzymatic Analysis. 2nd. pp.1475-1479. Verlag chemic weinheim/Academic Press. Inc., New Yourk, San Francisco, and London. 37.Noll, F. (1974) L-(+)-Lactate: determination with LDH, GPT, and NAD. In: H.U. Bergmeyer (Ed). Methods of Enzymatic Analysis. 2nd. pp.1499-1502. Verlag chemic weinheim/Academic Press. Inc., New Yourk, San Francisco, and London. 38.Noll, F. (1974) L-(+)-Lactate: determination with LDH, GPT, and NAD. In: H.U. Bergmeyer (Ed). Methods of Enzymatic Analysis. 2nd. pp.1528-1532. Verlag chemic weinheim/Academic Press. Inc., New Yourk, San Francisco, and London. 39.Norris, T. B., J. M. Wraith, R. W. Castenholz, T. R. McDermott. (2002) Soil microbial community structure across a thermal gradient following a geothermal heating event. Applied and environmental microbiology. 68:6300- 6309. 40.Nicol, G. W., L. A. Glover, J. I. Prosser. (2003) The impact grassland management on archaeal community strcture in upland pasture rhizosphere soil. Environmental microbiology. 5:152-162. 41.Nelson, S. C. and Elevitch C. R. (2006) Noni: The Complete Guide for Consumers and Growers. Permanent Agriculture Resources (PAR). USA. 42.Nelson, D. S., O. D. Teniola, L. Ban-Koffi, M. Owusu, T. S. Andersson, W. H. Holzapfel. (2007) The microbiology of Ghanaian cocoa fermentations analysed using culture- dependent and culture-independent methods. International Journal of Food Microbiology. 114:168-186. 43.Oliver, D. M. and P. Bean (1999) Minireview: principles and application of methods for DNA-based typing of microbial organism. Journal of clinical microbiology. 37:1661-1667. 44.Runkel, M., Bourian, M. and Legrum, W. (1997) Scopolin and skimmin as constituents of citrus fruits. Fruit Processing. 7(6):213-216. 45.Runkel, M., Moeller, A. and Tegtmeier, M. (1997) Detection of scopolin in the grapefruit (Citrus paradisi). Fresenius' journal of analytical chemistry. 359:516-520. 46.Sheffield, V. C., J. S. Beck, E. M. Stone, R. M. Myers. (1989) Attachment of a 40 bp G+C rich sequence (GC- clamp) to genomic DNA fragments by polymerase chain reaction results in improved detection of single-base changes. Proceedings of the National Academy of Sciences of the United States of America. 86:232-236. 47.Simbert, R. M. and N. R. Krieg. (1994) Phenotypic characterization. Methods for General and Molecular Bacteriology. pp. 607-654. 48.Sang, S., Wang, M. and Ho, C. T. (2000) Analysis of chemical compounds in noni fruits (Morinda citrifolia). 220th ACS National Meeting. August 20-24. 49.Seidemann, J. (2001) Noni: questionable magic fruit from the South Seas. Pharmazeutische Zeitung 146(40): 36-40. 50.Szymanski, M., M. Z. Barciszewska, V. A. Erdmann, J. Barciszewski. (2002) 5S Ribosomal RNA Database. Nucleic acids research. 30:176-178. 51.Sekiguchi, H., M. Watanabe, T. Nakahara, B. Xu, H. Uchiyama. (2002) Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis. Applied and environmental microbiology. 68:5142-5150. 52.Stamper, D. M., M. Jacobs, R. N. (2003) Bacterial population changes in a membrane bioreactor for graywater treatment monitored by denaturing gradient gel electrophoresis analysis of 16S rRNA gene fragments. Applied and environmental microbiology. 69:852-860. 53.Stephan Pabinger. (2006) Development of a Web-based application for managing and analyzing real-time PCR experiments. Fachhochschul-Diplomstudiengang Bioinformatik. 4232. Hagenberg, Austria. 54.Smit, S., J. Widmann, R. Knight. (2007) Evolutionary rates vary among rRNA structural elements. Nucleic acids research. 35(10):3339-3354. 55.Tsai, Y. L., B. H. Olson. (1991) Rapid method for direct extraction of DNA from soil and sediments. Applied and environmental microbiology. 57(4):1070-1074. 56.van de Peer, Y., I. van den Broeck, P. de Dijk, R. de Wachter. (1994) Database on the structure of small ribosomal subunit RNA. Nucleic Acid Research. 22(17): 3488-3493. 57.Woese, C. R. (1987) Bacterial evolution. Microbiological reviews. 51:221-271. 58.Williams, J. G. K., Kubelik, A. R., Livak, K. J., Rafalshi, J. A., Tingey, S. V. (1990) DNA polymorphism amplified by arbitrary primer are useful as genetic markers. Nucleic Acids Research. 18:6531-6533. 59.Wang, M., Kikuzaki, H., Csiszar, K., Boyd, C. D., Maunakea, A., Fong, S. F.T., Ghai, G., Rosen, R. T., Nakatani, N. and Ho, C. T. (1999) Novel tri- saccharide fatty acid ester identified from the fruits of Morinda citrifolia (noni). Journal of agricultural and food chemistry. 47:4880-4882. 60.Wang, M., Kikuzaki, H., Jin, Y., Nakatani, N., Zhu, N., Csiszar, K., Boyd, C.,Rosen, R. T., Ghai, G., and Ho, C. T. (2000) Novel glycosides from noni (Morinda citrifolia). Journal of natural products. 63:1182-1183. 61.Watanabe, K., K. Watanabe, Y. Kodama, K. Syutsubo, S. Harayma. (2000) Molecular Characterization of Bacterial Populations in Petroleum-Contaminated Groundwater Dischargedfrom Underground Crude Oil Storage Cavities. Applied and environmental microbiology. 66(11):4803- 4809. 62.Wang, M. Y., B. J. West, C. J. Jensen, D. Nowicki, S. U. Chen, A. K. Palu, G. Anderson. (2002) Morinda citrifolia (Noni): A literature review and recent advances in Noni research. Acta pharmacologica Sinica. 23(12):1127-1141. 63.Yanine, C. B., F. Vaillant, A. M. Perez, M. Reynes, J. M. Brillouet, P. Brat. (2006) The noni fruit (Morinda citrifolia L.): A review of agricultural research, nutritional and therapeutic properties. Journal of Food Composition and Analysis. 19:645-654. 64.Yanine, C. B., F. Vaillant, A. M. Pérez, M. P. Belleville, C. Zúñiga and P. Brat. (2007) The ripening and aging of noni fruits (Morinda citrifolia L.): microbiological flora and antioxidant compounds. Journal of the Science of Food and Agriculture. 87:1710-1716. 65.Zhou, J., M. A. Bruns, M. J. Tiedje. (1996) DNA Recovery from Soils of Diverse Composition. Applied and environmental microbiology. 62(2):316-322. 66.Zoetendal, E. G., A. D. L. Akkermans, W.M. De Vos. (1998) Temperature gradient gel electrophoresis analysis of 16S Rrna from human fecal samples reveals stable and host-specific communities of active bacteria. Applied and Environmental Microbiology. 64:3854-3859. 67.Zoetendal, E. G., A. von Wright, T. Vilpponen-Salmela, K. Ben-Amor, A. D. Akkermans. W. M. de Vos. (2002) Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the clone and differ from the community recovered from feces. Applied and environmental microbiology. 68:3401-3407. | |
| dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/41338 | - |
| dc.description.abstract | 檄樹 (Morinda citrifolia L.) 又名諾麗 (noni),其果實之發酵屬於自然發酵,過程中並未額外添加菌酛。然而,對於諾麗果於發酵過程中的菌相變化至今尚未有文獻報告。因此,本篇研究擬同時應用目前可探知最完整菌群結構之方法— PCR-DGGE 分子生物技術及傳統培養技術進行鑑定,以了解諾麗果實於發酵過程中菌群之結構及其變化情況,並比較兩種鑑定方法之間的差異性。此外,亦同時進行一般成分的分析,以期能夠了解菌相和成分變化之間的關聯性。
由結果發現,諾麗果於未發酵時之 pH 值、可溶性固形物含量、可滴定酸含量,分別於 4.67、5.9 °Brix、0.3% 左右;經發酵八週後則分別維持在 3.6-4.0、4.8-5.2 °Brix、1.0-1.3%之間。諾麗果中乳酸、醋酸、酒精皆於發酵第三天時開始產生,分別於第 14、24、21 天時達到最高峰:0.215、1.767、6.290 g/L。發酵八週後則分別維持在:0.1-0.2、1.6、5.0-5.5 g/L 之間。此外,諾麗果於發酵過程中總生菌數、乳酸菌數、總真菌數皆於發酵第一週時達到最高峰,菌數維持在106 CFU/mL 左右。第 2 至 7 週處於恆定期,菌數維持在 105 CFU/mL 左右。在進入第 8 週後,菌數則開始大幅下降至 103 CFU/mL 左右,之後則維持恆定。 由鑑定結果發現,諾麗果發酵期間細菌部份是以醋酸菌為主,可能的菌屬有:Swaminathamia、Acetobacter、Acidomonas、Gluconobacter、Gluconacetobacter、Asaia、Kozakia 共七種,其中又以 Acetobacter 為主導發酵的菌屬。且並不是由單幾株菌主導發酵,而是由許多不同種的 Acetobacter 一起共同進行發酵作用。 關鍵字:諾麗果、菌相、PCR-DGGE、醋酸菌Acetobacter | zh_TW |
| dc.description.provenance | Made available in DSpace on 2021-06-15T00:16:08Z (GMT). No. of bitstreams: 1 ntu-98-R96628203-1.pdf: 2367078 bytes, checksum: 3fe0a49f47a0fb93a14616fd38e49e44 (MD5) Previous issue date: 2009 | en |
| dc.description.tableofcontents | 誌謝………………………………………………………………………I
中文摘要…………………………………………………………………II 英文摘要………………………………………………………………III 目錄……………………………………………………………………IV 圖次……………………………………………………………………VII 表次……………………………………………………………………IX 壹、前言…………………………………………………………………1 貳、文獻回顧……………………………………………………………3 一、諾麗果……………………………………………………………3 (一) 諾麗果簡介……………………………………………………3 (二) 諾麗果加工製品………………………………………………3 (三) 諾麗果汁之營養成分…………………………………………4 (四) 諾麗果汁之發酵………………………………………………9 二、傳統微生物分類與鑑定…………………………………………13 (一) 發展背景………………………………………………………13 (二) 傳統細菌分類與鑑定系統……………………………………13 (三) 限制與瓶頸……………………………………………………15 三、分子生物技術於微生物分類與鑑定之發展……………………16 (一) 發展背景………………………………………………………16 (二) 發展現況簡介…………………………………………………16 四、利用 PCR-DGGE 技術應用於食品微生物菌群結構的探討……17 (一) 16S rDNA 在細菌分類與鑑定上的獨特性及應用……………17 (二) 聚合酶連鎖反應………………………………………………19 (三) 變性梯度膠體電泳……………………………………………22 參、材料與方法………………………………………………………29 一、實驗架構…………………………………………………………29 二、實驗材料…………………………………………………………30 (一) 諾麗果原料……………………………………………………30 (二) 藥品……………………………………………………………30 (三) 儀器設備………………………………………………………32 三、實驗方法…………………………………………………………33 (一) 原料前處理……………………………………………………33 (二) 八週發酵………………………………………………………33 (三) 分析樣品製備…………………………………………………34 (四) 傳統培養菌相分析……………………………………………34 (五) PCR-DGGE菌相分析……………………………………………35 (六) 一般成分分析…………………………………………………47 肆、結果與討論………………………………………………………54 一、傳統培養菌相分析………………………………………………54 二、一般成分分析……………………………………………………57 (一) pH 值之變化…………………………………………………57 (二) 可溶性固形物之變化…………………………………………60 (三) 可滴定酸之變化………………………………………………63 (四) 乳酸含量之變化………………………………………………67 (五) 醋酸含量之變化………………………………………………69 (六) 酒精含量之變化………………………………………………72 三、PCR-DGGE菌相分析………………………………………………75 (一) 微生物 genomic DNA 萃取結果……………………………75 (二) 16S rDNA 之 PCR 條件確立及反應結果……………………78 (三) 垂直 DGGE 電泳圖譜結果……………………………………85 (四) 水平 DGGE 電泳圖譜結果……………………………………88 (五) 16S rDNA V3 region 序列比對與分析結果………………96 (六) 綜合討論……………………………………………………110 伍、結論………………………………………………………………115 陸、參考文獻…………………………………………………………116 柒、附錄………………………………………………………………124 | |
| dc.language.iso | zh-TW | |
| dc.subject | 醋酸菌Acetobacter | zh_TW |
| dc.subject | 諾麗果 | zh_TW |
| dc.subject | 菌相 | zh_TW |
| dc.subject | PCR-DGGE | zh_TW |
| dc.subject | Microflora | en |
| dc.subject | Morinda citrifolia | en |
| dc.subject | Acetobacter | en |
| dc.subject | PCR-DGGE | en |
| dc.title | 檄樹果實自然發酵過程中菌相與果汁成分變化之研究 | zh_TW |
| dc.title | Studies on the Changes of Microflora and Chemical Constituents in the Noni (Morinda citrifolia L.) Fruit Juices during Natural Fruit Fermentation. | en |
| dc.type | Thesis | |
| dc.date.schoolyear | 97-2 | |
| dc.description.degree | 碩士 | |
| dc.contributor.coadvisor | 曾文聖 | |
| dc.contributor.oralexamcommittee | 徐源泰 | |
| dc.subject.keyword | 諾麗果,菌相,PCR-DGGE,醋酸菌Acetobacter, | zh_TW |
| dc.subject.keyword | Morinda citrifolia,Microflora,PCR-DGGE,Acetobacter, | en |
| dc.relation.page | 129 | |
| dc.rights.note | 有償授權 | |
| dc.date.accepted | 2009-06-10 | |
| dc.contributor.author-college | 生物資源暨農學院 | zh_TW |
| dc.contributor.author-dept | 園藝學研究所 | zh_TW |
| 顯示於系所單位: | 園藝暨景觀學系 | |
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