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完整後設資料紀錄
DC 欄位 | 值 | 語言 |
---|---|---|
dc.contributor.advisor | 李財坤(Tsai-Kun Li) | |
dc.contributor.author | Han-Wen Chang | en |
dc.contributor.author | 張涵雯 | zh_TW |
dc.date.accessioned | 2021-06-13T06:37:59Z | - |
dc.date.available | 2007-08-03 | |
dc.date.copyright | 2006-08-03 | |
dc.date.issued | 2006 | |
dc.date.submitted | 2005-07-26 | |
dc.identifier.citation | Abraham, R.T. (2001) Cell cycle checkpoint signaling through the ATM and ATR kinases. Genes Dev, 15, 2177-2196.
Aoki, K., Ishida, R. and Kasai, M. (1997) Isolation and characterization of a cDNA encoding a Translin-like protein, TRAX. FEBS Lett, 401, 109-112. Bachrati, C.Z. and Hickson, I.D. (2003) RecQ helicases: suppressors of tumorigenesis and premature aging. Biochem J, 374, 577-606. Bailis, A.M., Arthur, L. and Rothstein, R. (1992) Genome rearrangement in top3 mutants of Saccharomyces cerevisiae requires a functional RAD1 excision repair gene. Mol Cell Biol, 12, 4988-4993. Bennett, R.J., Noirot-Gros, M.F. and Wang, J.C. (2000) Interaction between yeast sgs1 helicase and DNA topoisomerase III. J Biol Chem, 275, 26898-26905. Brachmann, R.K. and Boeke, J.D. (1997) Tag games in yeast: the two-hybrid system and beyond. Curr Opin Biotechnol, 8, 561-568. Chakraverty, R.K., Kearsey, J.M., Oakley, T.J., Grenon, M., de La Torre Ruiz, M.A., Lowndes, N.F. and Hickson, I.D. (2001) Topoisomerase III acts upstream of Rad53p in the S-phase DNA damage checkpoint. Mol Cell Biol, 21, 7150-7162. Champoux, J.J. (2001) DNA topoisomerases: structure, function, and mechanism. Annu Rev Biochem, 70, 369-413. DiGate, R.J. and Marians, K.J. (1992) Escherichia coli topoisomerase III-catalyzed cleavage of RNA. J Biol Chem, 267, 20532-20535. Drolet, M., Bi, X. and Liu, L.F. (1994) Hypernegative supercoiling of the DNA template during transcription elongation in vitro. J Biol Chem, 269, 2068-2074. Drolet, M., Phoenix, P., Menzel, R., Masse, E., Liu, L.F. and Crouch, R.J. (1995) Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I. Proc Natl Acad Sci U S A, 92, 3526-3530. Dulbecco, R. and Vogt, M. (1963) Evidence For A Ring Structure Of Polyoma Virus Dna. Proc Natl Acad Sci U S A, 50, 236-243. Dutertre, S., Ababou, M., Onclercq, R., Delic, J., Chatton, B., Jaulin, C. and Amor-Gueret, M. (2000) Cell cycle regulation of the endogenous wild type Bloom's syndrome DNA helicase. Oncogene, 19, 2731-2738. Ellis, N.A., Groden, J., Ye, T.Z., Straughen, J., Lennon, D.J., Ciocci, S., Proytcheva, M. and German, J. (1995) The Bloom's syndrome gene product is homologous to RecQ helicases. Cell, 83, 655-666. Fabre, F., Chan, A., Heyer, W.D. and Gangloff, S. (2002) Alternate pathways involving Sgs1/Top3, Mus81/ Mms4, and Srs2 prevent formation of toxic recombination intermediates from single-stranded gaps created by DNA replication. Proc Natl Acad Sci U S A, 99, 16887-16892. Frei, C. and Gasser, S.M. (2000) The yeast Sgs1p helicase acts upstream of Rad53p in the DNA replication checkpoint and colocalizes with Rad53p in S-phase-specific foci. Genes Dev, 14, 81-96. Fricke, W.M., Kaliraman, V. and Brill, S.J. (2001) Mapping the DNA topoisomerase III binding domain of the Sgs1 DNA helicase. J Biol Chem, 276, 8848-8855. Fritz, E., Elsea, S.H., Patel, P.I. and Meyn, M.S. (1997) Overexpression of a truncated human topoisomerase III partially corrects multiple aspects of the ataxia-telangiectasia phenotype. Proc Natl Acad Sci U S A, 94, 4538-4542. Gangloff, S., McDonald, J.P., Bendixen, C., Arthur, L. and Rothstein, R. (1994) The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol Cell Biol, 14, 8391-8398. Goodwin, A., Wang, S.W., Toda, T., Norbury, C. and Hickson, I.D. (1999) Topoisomerase III is essential for accurate nuclear division in Schizosaccharomyces pombe. Nucleic Acids Res, 27, 4050-4058. Hanai, R., Caron, P.R. and Wang, J.C. (1996) Human TOP3: a single-copy gene encoding DNA topoisomerase III. Proc Natl Acad Sci U S A, 93, 3653-3657. Harmon, F.G., Brockman, J.P. and Kowalczykowski, S.C. (2003) RecQ helicase stimulates both DNA catenation and changes in DNA topology by topoisomerase III. J Biol Chem, 278, 42668-42678. Harmon, F.G., DiGate, R.J. and Kowalczykowski, S.C. (1999) RecQ helicase and topoisomerase III comprise a novel DNA strand passage function: a conserved mechanism for control of DNA recombination. Mol Cell, 3, 611-620. Hiasa, H., DiGate, R.J. and Marians, K.J. (1994) Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro. J Biol Chem, 269, 2093-2099. Hickson, I.D. (2003) RecQ helicases: caretakers of the genome. Nat Rev Cancer, 3, 169-178. Hsiang, Y.H., Wu, H.Y. and Liu, L.F. (1988) Proliferation-dependent regulation of DNA topoisomerase II in cultured human cells. Cancer Res, 48, 3230-3235. James, P., Halladay, J. and Craig, E.A. (1996) Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics, 144, 1425-1436. Kaliraman, V., Mullen, J.R., Fricke, W.M., Bastin-Shanower, S.A. and Brill, S.J. (2001) Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease. Genes Dev, 15, 2730-2740. Kim, R.A., Caron, P.R. and Wang, J.C. (1995) Effects of yeast DNA topoisomerase III on telomere structure. Proc Natl Acad Sci U S A, 92, 2667-2671. Kim, R.A. and Wang, J.C. (1992) Identification of the yeast TOP3 gene product as a single strand-specific DNA topoisomerase. J Biol Chem, 267, 17178-17185. Kitao, S., Shimamoto, A., Goto, M., Miller, R.W., Smithson, W.A., Lindor, N.M. and Furuichi, Y. (1999) Mutations in RECQL4 cause a subset of cases of Rothmund-Thomson syndrome. Nat Genet, 22, 82-84. Kobayashi, M. and Hanai, R. (2001) M phase-specific association of human topoisomerase IIIbeta with chromosomes. Biochem Biophys Res Commun, 287, 282-287. Kwan, K.Y., Moens, P.B. and Wang, J.C. (2003) Infertility and aneuploidy in mice lacking a type IA DNA topoisomerase III beta. Proc Natl Acad Sci U S A, 100, 2526-2531. Kwan, K.Y. and Wang, J.C. (2001) Mice lacking DNA topoisomerase IIIbeta develop to maturity but show a reduced mean lifespan. Proc Natl Acad Sci U S A, 98, 5717-5721. Laursen, L.V., Ampatzidou, E., Andersen, A.H. and Murray, J.M. (2003) Role for the fission yeast RecQ helicase in DNA repair in G2. Mol Cell Biol, 23, 3692-3705. Li, T.K. and Liu, L.F. (2001) Tumor cell death induced by topoisomerase-targeting drugs. Annu Rev Pharmacol Toxicol, 41, 53-77. Li, W., Kim, S.M., Lee, J. and Dunphy, W.G. (2004) Absence of BLM leads to accumulation of chromosomal DNA breaks during both unperturbed and disrupted S phases. J Cell Biol, 165, 801-812. Li, W. and Wang, J.C. (1998) Mammalian DNA topoisomerase IIIalpha is essential in early embryogenesis. Proc Natl Acad Sci U S A, 95, 1010-1013. Liu, L.F. and Wang, J.C. (1987) Supercoiling of the DNA template during transcription. Proc Natl Acad Sci U S A, 84, 7024-7027. Liu, Q., Guntuku, S., Cui, X.S., Matsuoka, S., Cortez, D., Tamai, K., Luo, G., Carattini-Rivera, S., DeMayo, F., Bradley, A., Donehower, L.A. and Elledge, S.J. (2000) Chk1 is an essential kinase that is regulated by Atr and required for the G(2)/M DNA damage checkpoint. Genes Dev, 14, 1448-1459. Maftahi, M., Han, C.S., Langston, L.D., Hope, J.C., Zigouras, N. and Freyer, G.A. (1999) The top3(+) gene is essential in Schizosaccharomyces pombe and the lethality associated with its loss is caused by Rad12 helicase activity. Nucleic Acids Res, 27, 4715-4724. Matsuoka, S., Huang, M. and Elledge, S.J. (1998) Linkage of ATM to cell cycle regulation by the Chk2 protein kinase. Science, 282, 1893-1897. Matsuoka, S., Rotman, G., Ogawa, A., Shiloh, Y., Tamai, K. and Elledge, S.J. (2000) Ataxia telangiectasia-mutated phosphorylates Chk2 in vivo and in vitro. Proc Natl Acad Sci U S A, 97, 10389-10394. Meetei, A.R., Sechi, S., Wallisch, M., Yang, D., Young, M.K., Joenje, H., Hoatlin, M.E. and Wang, W. (2003) A multiprotein nuclear complex connects Fanconi anemia and Bloom syndrome. Mol Cell Biol, 23, 3417-3426. Miyajima, A., Seki, M., Onoda, F., Shiratori, M., Odagiri, N., Ohta, K., Kikuchi, Y., Ohno, Y. and Enomoto, T. (2000) Sgs1 helicase activity is required for mitotic but apparently not for meiotic functions. Mol Cell Biol, 20, 6399-6409. Mondragon, A. and DiGate, R. (1999) The structure of Escherichia coli DNA topoisomerase III. Structure Fold Des, 7, 1373-1383. Mullen, J.R., Kaliraman, V. and Brill, S.J. (2000) Bipartite structure of the SGS1 DNA helicase in Saccharomyces cerevisiae. Genetics, 154, 1101-1114. Ng, S.W., Liu, Y., Hasselblatt, K.T., Mok, S.C. and Berkowitz, R.S. (1999) A new human topoisomerase III that interacts with SGS1 protein. Nucleic Acids Res, 27, 993-1000. Oh, M., Choi, I.S. and Park, S.D. (2002) Topoisomerase III is required for accurate DNA replication and chromosome segregation in Schizosaccharomyces pombe. Nucleic Acids Res, 30, 4022-4031. Painter, R.B. and Young, B.R. (1980) Radiosensitivity in ataxia-telangiectasia: a new explanation. Proc Natl Acad Sci U S A, 77, 7315-7317. Plank, J.L., Chu, S.H., Pohlhaus, J.R., Wilson-Sali, T. and Hsieh, T.S. (2005) Drosophila melanogaster topoisomerase IIIalpha preferentially relaxes a positively or negatively supercoiled bubble substrate and is essential during development. J Biol Chem, 280, 3564-3573. Sancar, A., Lindsey-Boltz, L.A., Unsal-Kacmaz, K. and Linn, S. (2004) Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints. Annu Rev Biochem, 73, 39-85. Sherr, C.J. (2004) Principles of tumor suppression. Cell, 116, 235-246. Shimamoto, A., Nishikawa, K., Kitao, S. and Furuichi, Y. (2000) Human RecQ5beta, a large isomer of RecQ5 DNA helicase, localizes in the nucleoplasm and interacts with topoisomerases 3alpha and 3beta. Nucleic Acids Res, 28, 1647-1655. Shor, E., Gangloff, S., Wagner, M., Weinstein, J., Price, G. and Rothstein, R. (2002) Mutations in homologous recombination genes rescue top3 slow growth in Saccharomyces cerevisiae. Genetics, 162, 647-662. Spellman, P.T., Sherlock, G., Zhang, M.Q., Iyer, V.R., Anders, K., Eisen, M.B., Brown, P.O., Botstein, D. and Futcher, B. (1998) Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell, 9, 3273-3297. Suzuki, Y., Demoliere, C., Kitamura, D., Takeshita, H., Deuschle, U. and Watanabe, T. (1997) HAX-1, a novel intracellular protein, localized on mitochondria, directly associates with HS1, a substrate of Src family tyrosine kinases. J Immunol, 158, 2736-2744. Tsai, HJ, and Teng, SC. (2004) DNA topoisomerase III involves in telomere-telomere recombination pathway. Institute of Microbiology School of Medicine National Taiwan University Master Thesis Vinograd, J., Lebowitz, J., Radloff, R., Watson, R. and Laipis, P. (1965) The twisted circular form of polyoma viral DNA. Proc Natl Acad Sci U S A, 53, 1104-1111. Wallis, J.W., Chrebet, G., Brodsky, G., Rolfe, M. and Rothstein, R. (1989) A hyper-recombination mutation in S. cerevisiae identifies a novel eukaryotic topoisomerase. Cell, 58, 409-419. Wang, J.C. (1971) Interaction between DNA and an Escherichia coli protein omega. J Mol Biol, 55, 523-533. Wang, J.C. (2002) Cellular roles of DNA topoisomerases: a molecular perspective. Nat Rev Mol Cell Biol, 3, 430-440. Wang, T.F. and Kung, W.M. (2002) Supercomplex formation between Mlh1-Mlh3 and Sgs1-Top3 heterocomplexes in meiotic yeast cells. Biochem Biophys Res Commun, 296, 949-953. Wang, Y., Cortez, D., Yazdi, P., Neff, N., Elledge, S.J. and Qin, J. (2000) BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures. Genes Dev, 14, 927-939. Watson, J.D. and Crick, F.H. (1953) Genetical implications of the structure of deoxyribonucleic acid. Nature, 171, 964-967. Watson, J.D. and Crick, F.H. (1953) Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid. Nature, 171, 737-738. Watt, P.M., Hickson, I.D., Borts, R.H. and Louis, E.J. (1996) SGS1, a homologue of the Bloom's and Werner's syndrome genes, is required for maintenance of genome stability in Saccharomyces cerevisiae. Genetics, 144, 935-945. Watt, P.M., Louis, E.J., Borts, R.H. and Hickson, I.D. (1995) Sgs1: a eukaryotic homolog of E. coli RecQ that interacts with topoisomerase II in vivo and is required for faithful chromosome segregation. Cell, 81, 253-260. Weil, R. and Vinograd, J. (1963) The Cyclic Helix And Cyclic Coil Forms Of Polyoma Viral Dna. Proc Natl Acad Sci U S A, 50, 730-738. Weinert, T.A. and Hartwell, L.H. (1988) The RAD9 gene controls the cell cycle response to DNA damage in Saccharomyces cerevisiae. Science, 241, 317-322. Wilson-Sali, T. and Hsieh, T.S. (2002) Generation of double-stranded breaks in hypernegatively supercoiled DNA by Drosophila topoisomerase IIIbeta, a type IA enzyme. J Biol Chem, 277, 26865-26871. Wilson-Sali, T. and Hsieh, T.S. (2002) Preferential cleavage of plasmid-based R-loops and D-loops by Drosophila topoisomerase IIIbeta. Proc Natl Acad Sci U S A, 99, 7974-7979. Wilson, T.M., Chen, A.D. and Hsieh, T. (2000) Cloning and characterization of Drosophila topoisomerase IIIbeta. Relaxation of hypernegatively supercoiled DNA. J Biol Chem, 275, 1533-1540. Woessner, R.D., Mattern, M.R., Mirabelli, C.K., Johnson, R.K. and Drake, F.H. (1991) Proliferation- and cell cycle-dependent differences in expression of the 170 kilodalton and 180 kilodalton forms of topoisomerase II in NIH-3T3 cells. Cell Growth Differ, 2, 209-214. Wu, L., Davies, S.L., Levitt, N.C. and Hickson, I.D. (2001) Potential role for the BLM helicase in recombinational repair via a conserved interaction with RAD51. J Biol Chem, 276, 19375-19381. Wu, L., Davies, S.L., North, P.S., Goulaouic, H., Riou, J.F., Turley, H., Gatter, K.C. and Hickson, I.D. (2000) The Bloom's syndrome gene product interacts with topoisomerase III. J Biol Chem, 275, 9636-9644. Yigit, H. and Reznikoff, W.S. (1998) Escherichia coli DNA topoisomerase I and suppression of killing by Tn5 transposase overproduction: topoisomerase I modulates Tn5 transposition. J Bacteriol, 180, 5866-5874. Yigit, H. and Reznikoff, W.S. (1999) Escherichia coli DNA topoisomerase I copurifies with Tn5 transposase, and Tn5 transposase inhibits topoisomerase I. J Bacteriol, 181, 3185-3192. Yu, C.E., Oshima, J., Fu, Y.H., Wijsman, E.M., Hisama, F., Alisch, R., Matthews, S., Nakura, J., Miki, T., Ouais, S., Martin, G.M., Mulligan, J. and Schellenberg, G.D. (1996) Positional cloning of the Werner's syndrome gene. Science, 272, 258-262. Zhao, H. and Piwnica-Worms, H. (2001) ATR-mediated checkpoint pathways regulate phosphorylation and activation of human Chk1. Mol Cell Biol, 21, 4129-4139. | |
dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/34976 | - |
dc.description.abstract | 最近的研究發現,哺乳動物具有兩個 DNA 拓樸酶III之同功酶 - TOP3α 和 TOP3β ,致使科學家們感興趣於剖析兩個同功酶各自的酵素活性及功能。在本篇研究中,我們利用酵母菌雙雜交以及 RNA 干擾壓制細胞內基因表現的技術,找出和 hTOP3 同功酶有交互作用的蛋白質候選者且推論 hTOP3 同功酶在細胞內可能的功能;且分別勾勒兩個 hTOP3 同功酶的蛋白質交互作用圖譜亦應可使我們區分兩者分別的細胞功能。依據實驗結果,我們發現與 hTOP3α 同功酶有交互作用的蛋白質候選者在數量上和種類上都跟與 hTOP3β 同功酶有交互作用的蛋白質候選者不同。我們也檢測了兩個 hTOP3 同功酶的基因表現程度,結果顯示: hTOP3α基因表現在 G1/S 時期達到最高,而 hTOP3β則是在 G2/M 時期為高峰;此外, hTOP3α在腫瘤組織的基因表達程度較同來源的正常組織低。令人驚訝的,我們發現了 hTOP3α在細胞週期檢控點的調控上扮演角色,而這樣的調控很有可能是經由轉錄機制調控細胞週期檢控點相關蛋白的表現量。總括以上,我們的實驗結果支持了兩個 hTOP3 同功酶有不同功能的假設,且 hTOP3α在 S 時期檢控點上扮演重要的角色。除此之外,由於 hTOP3α在腫瘤組織的基因表達較低且 hTOP3α在細胞週期檢控點的調控上扮演角色,因此我們推測 hTOP3α可能作為一腫瘤抑制因子。兩個 hTOP3 同功酶在細胞瘤化上是否扮演不同的角色亦在本篇論文中被討論。 | zh_TW |
dc.description.abstract | Recent identification of two DNA topoisomerase III isoforms, TOP3α and TOP3β , in mammalian cells has promoted great interests to dissect iozyme-specific activities and functions. In this thesis, we took advantage of the well-developed yeast 2-hybrid system and RNA interference gene-knockdown technology to identify potential TOP3-interacting proteins and to determine the potential cellular functions of hTOP3 isozymes. Mapping out different interacting protein of two human TOP3 isozymes should also enable us to differentiate their cellular functions. Indeed, the spectrum of potential hTOP3-interating proteins differs both qualitatively and quantitatively from that of potential hTOP3-interating proteins. We also examined the gene expression profiles of two hTOP3 isoforms, which pointed to the following conclusion: hTOP3α level reaches prime in G1/S phase, while the highest expression of hTOP3β is observed during G2/M stage. Furthermore, the expression levels of hTOP3α has been shown to be lower in tumor tissues compared to the corresponding normal tissues. Most striking, we observed the role of hTOP3α in regulating the activation of cell cycle checkpoint, possibly through controlling on the transcription levels of checkpoint proteins. Taken together, our results suggest that two hTOP3 isozymes exhibit different cellular functions with hTOP3α plays a major role in S-phase checkpoint regulation. In addition, the lower expression level of hTOP3α in cancerous tissues and potential role of hTOP3α in cell cycle checkpoint regulation have led us speculate that hTOP3α might act as a tumor suppressor. The differential roles of TOP3 isozymes in turmogenesis are also discussed. | en |
dc.description.provenance | Made available in DSpace on 2021-06-13T06:37:59Z (GMT). No. of bitstreams: 1 ntu-95-R92445112-1.pdf: 6271736 bytes, checksum: 5915c9e22ef399d23c227022f1deef10 (MD5) Previous issue date: 2006 | en |
dc.description.tableofcontents | 目錄……………………………………………………………………I
英文摘要………………………………………………………………II 中文摘要………………………………………………………………III 緒論……………………………………………………………………1 研究目標………………………………………………………………15 材料與方法……………………………………………………………16 結果……………………………………………………………………26 討論……………………………………………………………………33 參考文獻………………………………………………………………40 圖表……………………………………………………………………46 | |
dc.language.iso | zh-TW | |
dc.title | 人類DNA拓樸異構酶Ⅲ的功能研究 | zh_TW |
dc.title | Functional Study on Human DNA Topoisomerase Ⅲ | en |
dc.type | Thesis | |
dc.date.schoolyear | 94-2 | |
dc.description.degree | 碩士 | |
dc.contributor.oralexamcommittee | 董馨蓮(Shin-Lian Doong),鄧述諄(Shu-Chun Teng) | |
dc.subject.keyword | 拓樸異構酶,細胞週期,蛋白質複合體,拓樸酶,III, | zh_TW |
dc.subject.keyword | topoisomerase III,cell cycle checkpoint,protein complex,top3, | en |
dc.relation.page | 63 | |
dc.rights.note | 有償授權 | |
dc.date.accepted | 2005-07-27 | |
dc.contributor.author-college | 醫學院 | zh_TW |
dc.contributor.author-dept | 微生物學研究所 | zh_TW |
顯示於系所單位: | 微生物學科所 |
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