請用此 Handle URI 來引用此文件:
http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/29108
完整後設資料紀錄
DC 欄位 | 值 | 語言 |
---|---|---|
dc.contributor.advisor | 張鑫(Shin C. Chang) | |
dc.contributor.author | Yi-Hen Kou | en |
dc.contributor.author | 寇怡衡 | zh_TW |
dc.date.accessioned | 2021-06-13T00:40:29Z | - |
dc.date.available | 2012-08-08 | |
dc.date.copyright | 2007-08-08 | |
dc.date.issued | 2007 | |
dc.date.submitted | 2007-07-25 | |
dc.identifier.citation | 1.Adams, N. J., R. W. Chamberlain, L. A. Taylor, F. Davidson, C. K. Lin, R. M. Elliott, and P. Simmonds. 1997. Complete coding sequence of hepatitis C virus genotype 6a. Biochem Biophys Res Commun 234:393-6.
2.Agnello, V., G. Abel, M. Elfahal, G. B. Knight, and Q. X. Zhang. 1999. Hepatitis C virus and other flaviviridae viruses enter cells via low density lipoprotein receptor. Proc Natl Acad Sci U S A 96:12766-71. 3.Arias, C. F., F. Preugschat, and J. H. Strauss. 1993. Dengue 2 virus NS2B and NS3 form a stable complex that can cleave NS3 within the helicase domain. Virology 193:888-99. 4.Baek, K. H., H. Y. Park, C. M. Kang, S. J. Kim, S. J. Jeong, E. K. Hong, J. W. Park, Y. C. Sung, T. Suzuki, C. M. Kim, and C. W. Lee. 2006. Overexpression of hepatitis C virus NS5A protein induces chromosome instability via mitotic cell cycle dysregulation. J Mol Biol 359:22-34. 5.Bartenschlager, R., L. Ahlborn-Laake, J. Mous, and H. Jacobsen. 1994. Kinetic and structural analyses of hepatitis C virus polyprotein processing. J Virol 68:5045-55. 6.Bartenschlager, R., L. Ahlborn-Laake, J. Mous, and H. Jacobsen. 1993. Nonstructural protein 3 of the hepatitis C virus encodes a serine-type proteinase required for cleavage at the NS3/4 and NS4/5 junctions. J Virol 67:3835-44. 7.Bartenschlager, R., V. Lohmann, T. Wilkinson, and J. O. Koch. 1995. Complex formation between the NS3 serine-type proteinase of the hepatitis C virus and NS4A and its importance for polyprotein maturation. J Virol 69:7519-28. 8.Behrens, S. E., L. Tomei, and R. De Francesco. 1996. Identification and properties of the RNA-dependent RNA polymerase of hepatitis C virus. EMBO J 15:12-22. 9.Bera, A. K., R. J. Kuhn, and J. L. Smith. 2007. Functional Characterization of cis and trans Activity of the Flavivirus NS2B-NS3 Protease. J Biol Chem 282:12883-92. 10.Blight, K. J., A. A. Kolykhalov, and C. M. Rice. 2000. Efficient initiation of HCV RNA replication in cell culture. Science 290:1972-4. 11.Bradley, D. W., K. A. McCaustland, E. H. Cook, C. A. Schable, J. W. Ebert, and J. E. Maynard. 1985. Posttransfusion non-A, non-B hepatitis in chimpanzees. Physicochemical evidence that the tubule-forming agent is a small, enveloped virus. Gastroenterology 88:773-9. 12.Branch, A. D., D. D. Stump, J. A. Gutierrez, F. Eng, and J. L. Walewski. 2005. The hepatitis C virus alternate reading frame (ARF) and its family of novel products: the alternate reading frame protein/F-protein, the double-frameshift protein, and others. Semin Liver Dis 25:105-17. 13.Butkiewicz, N. J., M. Wendel, R. Zhang, R. Jubin, J. Pichardo, E. B. Smith, A. M. Hart, R. Ingram, J. Durkin, P. W. Mui, M. G. Murray, L. Ramanathan, and B. Dasmahapatra. 1996. Enhancement of hepatitis C virus NS3 proteinase activity by association with NS4A-specific synthetic peptides: identification of sequence and critical residues of NS4A for the cofactor activity. Virology 225:328-38. 14.Chamberlain, R. W., N. Adams, A. A. Saeed, P. Simmonds, and R. M. Elliott. 1997. Complete nucleotide sequence of a type 4 hepatitis C virus variant, the predominant genotype in the Middle East. J Gen Virol 78:1341-7. 15.Chamberlain, R. W., N. J. Adams, L. A. Taylor, P. Simmonds, and R. M. Elliott. 1997. The complete coding sequence of hepatitis C virus genotype 5a, the predominant genotype in South Africa. Biochem Biophys Res Commun 236:44-9. 16.Chang, S. C., J. C. Cheng, Y. H. Kou, C. H. Kao, C. H. Chiu, H. Y. Wu, and M. F. Chang. 2000. Roles of the AX4GKS and arginine-rich motifs of hepatitis C virus RNA helicase in ATP- and viral RNA-binding activity. J Virol 74:9732-7. 17.Chen, C. H., P. M. Yang, G. T. Huang, H. S. Lee, J. L. Sung, and J. C. Sheu. 2007. Estimation of seroprevalence of hepatitis B virus and hepatitis C virus in Taiwan from a large-scale survey of free hepatitis screening participants. J Formos Med Assoc 106:148-55. 18.Cheng, J. C., M. F. Chang, and S. C. Chang. 1999. Specific interaction between the hepatitis C virus NS5B RNA polymerase and the 3' end of the viral RNA. J Virol 73:7044-9. 19.Choo, Q. L., G. Kuo, A. J. Weiner, L. R. Overby, D. W. Bradley, and M. Houghton. 1989. Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome. Science 244:359-62. 20.Choo, Q. L., K. H. Richman, J. H. Han, K. Berger, C. Lee, C. Dong, C. Gallegos, D. Coit, R. Medina-Selby, P. J. Barr, and et al. 1991. Genetic organization and diversity of the hepatitis C virus. Proc Natl Acad Sci U S A 88:2451-5. 21.Chuang, S. M., L. Chen, D. Lambertson, M. Anand, T. G. Kinzy, and K. Madura. 2005. Proteasome-mediated degradation of cotranslationally damaged proteins involves translation elongation factor 1A. Mol Cell Biol 25:403-13. 22.Cimarelli, A., and J. Luban. 1999. Translation elongation factor 1-alpha interacts specifically with the human immunodeficiency virus type 1 Gag polyprotein. J Virol 73:5388-401. 23.Costa-Mattioli, M., Y. Svitkin, and N. Sonenberg. 2004. La autoantigen is necessary for optimal function of the poliovirus and hepatitis C virus internal ribosome entry site in vivo and in vitro. Mol Cell Biol 24:6861-70. 24.Das, T., M. Mathur, A. K. Gupta, G. M. Janssen, and A. K. Banerjee. 1998. RNA polymerase of vesicular stomatitis virus specifically associates with translation elongation factor-1 alphabetagamma for its activity. Proc Natl Acad Sci U S A 95:1449-54. 25.Deleersnyder, V., A. Pillez, C. Wychowski, K. Blight, J. Xu, Y. S. Hahn, C. M. Rice, and J. Dubuisson. 1997. Formation of native hepatitis C virus glycoprotein complexes. J Virol 71:697-704. 26.Deng, L., M. Nagano-Fujii, M. Tanaka, Y. Nomura-Takigawa, M. Ikeda, N. Kato, K. Sada, and H. Hotta. 2006. NS3 protein of Hepatitis C virus associates with the tumour suppressor p53 and inhibits its function in an NS3 sequence-dependent manner. J Gen Virol 87:1703-13. 27.Dimasi, N., A. Pasquo, F. Martin, S. Di Marco, C. Steinkuhler, R. Cortese, and M. Sollazzo. 1998. Engineering, characterization and phage display of hepatitis C virus NS3 protease and NS4A cofactor peptide as a single-chain protein. Protein Eng 11:1257-65. 28.Domitrovich, A. M., K. W. Diebel, N. Ali, S. Sarker, and A. Siddiqui. 2005. Role of La autoantigen and polypyrimidine tract-binding protein in HCV replication. Virology 335:72-86. 29.Eckart, M. R., M. Selby, F. Masiarz, C. Lee, K. Berger, K. Crawford, C. Kuo, G. Kuo, M. Houghton, and Q. L. Choo. 1993. The hepatitis C virus encodes a serine protease involved in processing of the putative nonstructural proteins from the viral polyprotein precursor. Biochem Biophys Res Commun 192:399-406. 30.Egger, D., B. Wolk, R. Gosert, L. Bianchi, H. E. Blum, D. Moradpour, and K. Bienz. 2002. Expression of hepatitis C virus proteins induces distinct membrane alterations including a candidate viral replication complex. J Virol 76:5974-84. 31.Einav, S., M. Elazar, T. Danieli, and J. S. Glenn. 2004. A nucleotide binding motif in hepatitis C virus (HCV) NS4B mediates HCV RNA replication. J Virol 78:11288-95. 32.Ejiri, S. 2002. Moonlighting functions of polypeptide elongation factor 1: from actin bundling to zinc finger protein R1-associated nuclear localization. Biosci Biotechnol Biochem 66:1-21. 33.Enomoto, N., I. Sakuma, Y. Asahina, M. Kurosaki, T. Murakami, C. Yamamoto, Y. Ogura, N. Izumi, F. Marumo, and C. Sato. 1996. Mutations in the nonstructural protein 5A gene and response to interferon in patients with chronic hepatitis C virus 1b infection. N Engl J Med 334:77-81. 34.Etchison, D., S. C. Milburn, I. Edery, N. Sonenberg, and J. W. Hershey. 1982. Inhibition of HeLa cell protein synthesis following poliovirus infection correlates with the proteolysis of a 220,000-dalton polypeptide associated with eucaryotic initiation factor 3 and a cap binding protein complex. J Biol Chem 257:14806-10. 35.Failla, C., L. Tomei, and R. De Francesco. 1995. An amino-terminal domain of the hepatitis C virus NS3 protease is essential for interaction with NS4A. J Virol 69:1769-77. 36.Failla, C., L. Tomei, and R. De Francesco. 1994. Both NS3 and NS4A are required for proteolytic processing of hepatitis C virus nonstructural proteins. J Virol 68:3753-60. 37.Feinstone, S. M., A. Z. Kapikian, R. H. Purcell, H. J. Alter, and P. V. Holland. 1975. Transfusion-associated hepatitis not due to viral hepatitis type A or B. N Engl J Med 292:767-70. 38.Florese, R. H., M. Nagano-Fujii, Y. Iwanaga, R. Hidajat, and H. Hotta. 2002. Inhibition of protein synthesis by the nonstructural proteins NS4A and NS4B of hepatitis C virus. Virus Res 90:119-31. 39.Foy, E., K. Li, C. Wang, R. Sumpter, Jr., M. Ikeda, S. M. Lemon, and M. Gale, Jr. 2003. Regulation of interferon regulatory factor-3 by the hepatitis C virus serine protease. Science 300:1145-8. 40.Frelin, L., E. D. Brenndorfer, G. Ahlen, M. Weiland, C. Hultgren, M. Alheim, H. Glaumann, B. Rozell, D. R. Milich, J. G. Bode, and M. Sallberg. 2006. The hepatitis C virus and immune evasion: non-structural 3/4A transgenic mice are resistant to lethal tumour necrosis factor-alpha mediated liver disease. Gut 55:1475-83. 41.Friebe, P., V. Lohmann, N. Krieger, and R. Bartenschlager. 2001. Sequences in the 5' nontranslated region of hepatitis C virus required for RNA replication. J Virol 75:12047-57. 42.Fujita, T., S. Ishido, S. Muramatsu, M. Itoh, and H. Hotta. 1996. Suppression of actinomycin D-induced apoptosis by the NS3 protein of hepatitis C virus. Biochem Biophys Res Commun 229:825-31. 43.Gale, M. J., Jr., M. J. Korth, N. M. Tang, S. L. Tan, D. A. Hopkins, T. E. Dever, S. J. Polyak, D. R. Gretch, and M. G. Katze. 1997. Evidence that hepatitis C virus resistance to interferon is mediated through repression of the PKR protein kinase by the nonstructural 5A protein. Virology 230:217-27. 44.Gosert, R., D. Egger, V. Lohmann, R. Bartenschlager, H. E. Blum, K. Bienz, and D. Moradpour. 2003. Identification of the hepatitis C virus RNA replication complex in Huh-7 cells harboring subgenomic replicons. J Virol 77:5487-92. 45.Grakoui, A., D. W. McCourt, C. Wychowski, S. M. Feinstone, and C. M. Rice. 1993. Characterization of the hepatitis C virus-encoded serine proteinase: determination of proteinase-dependent polyprotein cleavage sites. J Virol 67:2832-43. 46.Grakoui, A., D. W. McCourt, C. Wychowski, S. M. Feinstone, and C. M. Rice. 1993. A second hepatitis C virus-encoded proteinase. Proc Natl Acad Sci U S A 90:10583-7. 47.Grakoui, A., C. Wychowski, C. Lin, S. M. Feinstone, and C. M. Rice. 1993. Expression and identification of hepatitis C virus polyprotein cleavage products. J Virol 67:1385-95. 48.Griffin, S. D., L. P. Beales, D. S. Clarke, O. Worsfold, S. D. Evans, J. Jaeger, M. P. Harris, and D. J. Rowlands. 2003. The p7 protein of hepatitis C virus forms an ion channel that is blocked by the antiviral drug, Amantadine. FEBS Lett 535:34-8. 49.Gross, S. R., and T. G. Kinzy. 2005. Translation elongation factor 1A is essential for regulation of the actin cytoskeleton and cell morphology. Nat Struct Mol Biol 12:772-8. 50.He, Q. Q., R. X. Cheng, Y. Sun, D. Y. Feng, Z. C. Chen, and H. Zheng. 2003. Hepatocyte transformation and tumor development induced by hepatitis C virus NS3 c-terminal deleted protein. World J Gastroenterol 9:474-8. 51.Hijikata, M., H. Mizushima, T. Akagi, S. Mori, N. Kakiuchi, N. Kato, T. Tanaka, K. Kimura, and K. Shimotohno. 1993. Two distinct proteinase activities required for the processing of a putative nonstructural precursor protein of hepatitis C virus. J Virol 67:4665-75. 52.Honda, M., M. R. Beard, L. H. Ping, and S. M. Lemon. 1999. A phylogenetically conserved stem-loop structure at the 5' border of the internal ribosome entry site of hepatitis C virus is required for cap-independent viral translation. J Virol 73:1165-74. 53.Hoofnagle, J. H. 1997. Hepatitis C: the clinical spectrum of disease. Hepatology 26:15S-20S. 54.Hsieh, T. Y., M. Matsumoto, H. C. Chou, R. Schneider, S. B. Hwang, A. S. Lee, and M. M. Lai. 1998. Hepatitis C virus core protein interacts with heterogeneous nuclear ribonucleoprotein K. J Biol Chem 273:17651-9. 55.Ishido, S., T. Fujita, and H. Hotta. 1998. Complex formation of NS5B with NS3 and NS4A proteins of hepatitis C virus. Biochem Biophys Res Commun 244:35-40. 56.Ishido, S., and H. Hotta. 1998. Complex formation of the nonstructural protein 3 of hepatitis C virus with the p53 tumor suppressor. FEBS Lett 438:258-62. 57.Ishido, S., S. Muramatsu, T. Fujita, Y. Iwanaga, W. Y. Tong, Y. Katayama, M. Itoh, and H. Hotta. 1997. Wild-type, but not mutant-type, p53 enhances nuclear accumulation of the NS3 protein of hepatitis C virus. Biochem Biophys Res Commun 230:431-6. 58.Ito, T., and M. M. Lai. 1999. An internal polypyrimidine-tract-binding protein-binding site in the hepatitis C virus RNA attenuates translation, which is relieved by the 3'-untranslated sequence. Virology 254:288-96. 59.Johnson, C. M., D. R. Perez, R. French, W. C. Merrick, and R. O. Donis. 2001. The NS5A protein of bovine viral diarrhoea virus interacts with the alpha subunit of translation elongation factor-1. J Gen Virol 82:2935-43. 60.Jones, C. T., C. L. Murray, D. K. Eastman, J. Tassello, and C. M. Rice. 2007. Hepatitis C virus p7 and NS2 proteins are essential for infectious virus production. J Virol. (in press) 61.Kaneko, T., Y. Tanji, S. Satoh, M. Hijikata, S. Asabe, K. Kimura, and K. Shimotohno. 1994. Production of two phosphoproteins from the NS5A region of the hepatitis C viral genome. Biochem Biophys Res Commun 205:320-6. 62.Kao, C. F., S. Y. Chen, J. Y. Chen, and Y. H. Wu Lee. 2004. Modulation of p53 transcription regulatory activity and post-translational modification by hepatitis C virus core protein. Oncogene 23:2472-83. 63.Kato, J., N. Kato, H. Yoshida, S. K. Ono-Nita, Y. Shiratori, and M. Omata. 2002. Hepatitis C virus NS4A and NS4B proteins suppress translation in vivo. J Med Virol 66:187-99. 64.Kato, N., K. H. Lan, S. K. Ono-Nita, Y. Shiratori, and M. Omata. 1997. Hepatitis C virus nonstructural region 5A protein is a potent transcriptional activator. J Virol 71:8856-9. 65.Kato, N., H. Sekiya, Y. Ootsuyama, T. Nakazawa, M. Hijikata, S. Ohkoshi, and K. Shimotohno. 1993. Humoral immune response to hypervariable region 1 of the putative envelope glycoprotein (gp70) of hepatitis C virus. J Virol 67:3923-30. 66.Kato, T., T. Date, M. Miyamoto, A. Furusaka, K. Tokushige, M. Mizokami, and T. Wakita. 2003. Efficient replication of the genotype 2a hepatitis C virus subgenomic replicon. Gastroenterology 125:1808-17. 67.Kato, T., T. Date, A. Murayama, K. Morikawa, D. Akazawa, and T. Wakita. 2006. Cell culture and infection system for hepatitis C virus. Nat Protoc 1:2334-9. 68.Kato, T., A. Furusaka, M. Miyamoto, T. Date, K. Yasui, J. Hiramoto, K. Nagayama, T. Tanaka, and T. Wakita. 2001. Sequence analysis of hepatitis C virus isolated from a fulminant hepatitis patient. J Med Virol 64:334-9. 69.Kato, T., T. Matsumura, T. Heller, S. Saito, R. K. Sapp, K. Murthy, T. Wakita, and T. J. Liang. 2007. Production of Infectious Hepatitis C Virus of Various Genotypes in Cell Cultures. J. Virol. 81:4405-4411. 70.Kim, D. W., Y. Gwack, J. H. Han, and J. Choe. 1995. C-terminal domain of the hepatitis C virus NS3 protein contains an RNA helicase activity. Biochem Biophys Res Commun 215:160-6. 71.Kim, J. L., K. A. Morgenstern, C. Lin, T. Fox, M. D. Dwyer, J. A. Landro, S. P. Chambers, W. Markland, C. A. Lepre, E. T. O'Malley, S. L. Harbeson, C. M. Rice, M. A. Murcko, P. R. Caron, and J. A. Thomson. 1996. Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide. Cell 87:343-55. 72.Koch, J. O., and R. Bartenschlager. 1999. Modulation of hepatitis C virus NS5A hyperphosphorylation by nonstructural proteins NS3, NS4A, and NS4B. J Virol 73:7138-46. 73.Kolykhalov, A. A., S. M. Feinstone, and C. M. Rice. 1996. Identification of a highly conserved sequence element at the 3' terminus of hepatitis C virus genome RNA. J Virol 70:3363-71. 74.Krieger, N., V. Lohmann, and R. Bartenschlager. 2001. Enhancement of hepatitis C virus RNA replication by cell culture-adaptive mutations. J Virol 75:4614-24. 75.Kuo, G., Q. L. Choo, H. J. Alter, G. L. Gitnick, A. G. Redeker, R. H. Purcell, T. Miyamura, J. L. Dienstag, M. J. Alter, C. E. Stevens, and et al. 1989. An assay for circulating antibodies to a major etiologic virus of human non-A, non-B hepatitis. Science 244:362-4. 76.Kuyumcu-Martinez, N. M., M. E. Van Eden, P. Younan, and R. E. Lloyd. 2004. Cleavage of poly(A)-binding protein by poliovirus 3C protease inhibits host cell translation: a novel mechanism for host translation shutoff. Mol Cell Biol 24:1779-90. 77.Kwun, H. J., E. Y. Jung, J. Y. Ahn, M. N. Lee, and K. L. Jang. 2001. p53-dependent transcriptional repression of p21(waf1) by hepatitis C virus NS3. J Gen Virol 82:2235-41. 78.Lai, M. Y., J. H. Kao, P. M. Yang, J. T. Wang, P. J. Chen, K. W. Chan, J. S. Chu, and D. S. Chen. 1996. Long-term efficacy of ribavirin plus interferon alfa in the treatment of chronic hepatitis C. Gastroenterology 111:1307-12. 79.Lamberti, A., M. Caraglia, O. Longo, M. Marra, A. Abbruzzese, and P. Arcari. 2004. The translation elongation factor 1A in tumorigenesis, signal transduction and apoptosis: review article. Amino Acids 26:443-8. 80.Li, K., E. Foy, J. C. Ferreon, M. Nakamura, A. C. Ferreon, M. Ikeda, S. C. Ray, M. Gale, Jr., and S. M. Lemon. 2005. Immune evasion by hepatitis C virus NS3/4A protease-mediated cleavage of the Toll-like receptor 3 adaptor protein TRIF. Proc Natl Acad Sci U S A 102:2992-7. 81.Lin, C., B. M. Pragai, A. Grakoui, J. Xu, and C. M. Rice. 1994. Hepatitis C virus NS3 serine proteinase: trans-cleavage requirements and processing kinetics. J Virol 68:8147-57. 82.Lin, C., J. A. Thomson, and C. M. Rice. 1995. A central region in the hepatitis C virus NS4A protein allows formation of an active NS3-NS4A serine proteinase complex in vivo and in vitro. J Virol 69:4373-80. 83.Liu, M. T., Y. R. Chen, S. C. Chen, C. Y. Hu, C. S. Lin, Y. T. Chang, W. B. Wang, and J. Y. Chen. 2004. Epstein-Barr virus latent membrane protein 1 induces micronucleus formation, represses DNA repair and enhances sensitivity to DNA-damaging agents in human epithelial cells. Oncogene 23:2531-9. 84.Liu, Y., G. Q. Bai, J. Cheng, S. H. Wu, L. Wang, F. M. Yan, L. X. Zhang, and Y. F. Cui. 2005. [Screening and cloning of hepatitis C virus non-structural protein 4A interacting protein gene in hepatocytes]. Zhonghua Gan Zang Bing Za Zhi 13:738-40. 85.Lohmann, V., F. Korner, A. Dobierzewska, and R. Bartenschlager. 2001. Mutations in hepatitis C virus RNAs conferring cell culture adaptation. J Virol 75:1437-49. 86.Lohmann, V., F. Korner, U. Herian, and R. Bartenschlager. 1997. Biochemical properties of hepatitis C virus NS5B RNA-dependent RNA polymerase and identification of amino acid sequence motifs essential for enzymatic activity. J Virol 71:8416-28. 87.Lohmann, V., F. Korner, J. Koch, U. Herian, L. Theilmann, and R. Bartenschlager. 1999. Replication of subgenomic hepatitis C virus RNAs in a hepatoma cell line. Science 285:110-3. 88.Lopez-Labrador, F. X., S. Ampurdanes, X. Forns, A. Castells, J. C. Saiz, J. Costa, J. Bruix, J. M. Sanchez Tapias, M. T. Jimenez de Anta, and J. Rodes. 1997. Hepatitis C virus (HCV) genotypes in Spanish patients with HCV infection: relationship between HCV genotype 1b, cirrhosis and hepatocellular carcinoma. J Hepatol 27:959-65. 89.Mannova, P., and L. Beretta. 2005. Activation of the N-Ras-PI3K-Akt-mTOR pathway by hepatitis C virus: control of cell survival and viral replication. J Virol 79:8742-9. 90.Meylan, E., J. Curran, K. Hofmann, D. Moradpour, M. Binder, R. Bartenschlager, and J. Tschopp. 2005. Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus. Nature 437:1167-72. 91.Moriya, K., H. Fujie, Y. Shintani, H. Yotsuyanagi, T. Tsutsumi, K. Ishibashi, Y. Matsuura, S. Kimura, T. Miyamura, and K. Koike. 1998. The core protein of hepatitis C virus induces hepatocellular carcinoma in transgenic mice. Nat Med 4:1065-7. 92.Munakata, T., M. Nakamura, Y. Liang, K. Li, and S. M. Lemon. 2005. Down-regulation of the retinoblastoma tumor suppressor by the hepatitis C virus NS5B RNA-dependent RNA polymerase. Proc Natl Acad Sci U S A 102:18159-64. 93.Muramatsu, S., S. Ishido, T. Fujita, M. Itoh, and H. Hotta. 1997. Nuclear localization of the NS3 protein of hepatitis C virus and factors affecting the localization. J Virol 71:4954-61. 94.Murphy, D. G., B. Willems, M. Deschenes, N. Hilzenrat, R. Mousseau, and S. Sabbah. 2007. Use of sequence analysis of the NS5B region for routine genotyping of hepatitis C virus with reference to C/E1 and 5' untranslated region sequences. J Clin Microbiol 45:1102-12. 95.Murray, J. W., B. T. Edmonds, G. Liu, and J. Condeelis. 1996. Bundling of actin filaments by elongation factor 1 alpha inhibits polymerization at filament ends. J Cell Biol 135:1309-21. 96.Neddermann, P., A. Clementi, and R. De Francesco. 1999. Hyperphosphorylation of the hepatitis C virus NS5A protein requires an active NS3 protease, NS4A, NS4B, and NS5A encoded on the same polyprotein. J Virol 73:9984-91. 97.Nishida, N., T. Nishimura, T. Ito, T. Komeda, Y. Fukuda, and K. Nakao. 2003. Chromosomal instability and human hepatocarcinogenesis. Histol Histopathol 18:897-909. 98.Nomura-Takigawa, Y., M. Nagano-Fujii, L. Deng, S. Kitazawa, S. Ishido, K. Sada, and H. Hotta. 2006. Non-structural protein 4A of Hepatitis C virus accumulates on mitochondria and renders the cells prone to undergoing mitochondria-mediated apoptosis. J Gen Virol 87:1935-45. 99.Oh, J. W., T. Ito, and M. M. Lai. 1999. A recombinant hepatitis C virus RNA-dependent RNA polymerase capable of copying the full-length viral RNA. J Virol 73:7694-702. 100.Oh, J. W., G. T. Sheu, and M. M. Lai. 2000. Template requirement and initiation site selection by hepatitis C virus polymerase on a minimal viral RNA template. J Biol Chem 275:17710-7. 101.Owsianka, A. M., and A. H. Patel. 1999. Hepatitis C virus core protein interacts with a human DEAD box protein DDX3. Virology 257:330-40. 102.Pallaoro, M., A. Lahm, G. Biasiol, M. Brunetti, C. Nardella, L. Orsatti, F. Bonelli, S. Orru, F. Narjes, and C. Steinkuhler. 2001. Characterization of the hepatitis C virus NS2/3 processing reaction by using a purified precursor protein. J Virol 75:9939-46. 103.Pang, P. S., E. Jankowsky, P. J. Planet, and A. M. Pyle. 2002. The hepatitis C viral NS3 protein is a processive DNA helicase with cofactor enhanced RNA unwinding. EMBO J 21:1168-76. 104.Pencil, S. D., Y. Toh, and G. L. Nicolson. 1993. Candidate metastasis-associated genes of the rat 13762NF mammary adenocarcinoma. Breast Cancer Res Treat 25:165-74. 105.Piccininni, S., A. Varaklioti, M. Nardelli, B. Dave, K. D. Raney, and J. E. McCarthy. 2002. Modulation of the hepatitis C virus RNA-dependent RNA polymerase activity by the non-structural (NS) 3 helicase and the NS4B membrane protein. J Biol Chem 277:45670-9. 106.Pietschmann, T., V. Lohmann, A. Kaul, N. Krieger, G. Rinck, G. Rutter, D. Strand, and R. Bartenschlager. 2002. Persistent and transient replication of full-length hepatitis C virus genomes in cell culture. J Virol 76:4008-21. 107.Pileri, P., Y. Uematsu, S. Campagnoli, G. Galli, F. Falugi, R. Petracca, A. J. Weiner, M. Houghton, D. Rosa, G. Grandi, and S. Abrignani. 1998. Binding of hepatitis C virus to CD81. Science 282:938-41. 108.Piron, M., P. Vende, J. Cohen, and D. Poncet. 1998. Rotavirus RNA-binding protein NSP3 interacts with eIF4GI and evicts the poly(A) binding protein from eIF4F. EMBO J 17:5811-21. 109.Porter, D. J. 1998. A kinetic analysis of the oligonucleotide-modulated ATPase activity of the helicase domain of the NS3 protein from hepatitis C virus. The first cycle of interaction of ATP with the enzyme is unique. J Biol Chem 273:14247-53. 110.Preugschat, F., D. R. Averett, B. E. Clarke, and D. J. Porter. 1996. A steady-state and pre-steady-state kinetic analysis of the NTPase activity associated with the hepatitis C virus NS3 helicase domain. J Biol Chem 271:24449-57. 111.Pugachev, K. V., N. Nomokonova, O. V. Morozova, and A. G. Pletnev. 1992. A short form of the tick-borne encephalitis virus NS3 protein. FEBS Lett 297:67-9. 112.Sakamuro, D., T. Furukawa, and T. Takegami. 1995. Hepatitis C virus nonstructural protein NS3 transforms NIH 3T3 cells. J Virol 69:3893-6. 113.Satoh, S., Y. Tanji, M. Hijikata, K. Kimura, and K. Shimotohno. 1995. The N-terminal region of hepatitis C virus nonstructural protein 3 (NS3) is essential for stable complex formation with NS4A. J Virol 69:4255-60. 114.Scarselli, E., H. Ansuini, R. Cerino, R. M. Roccasecca, S. Acali, G. Filocamo, C. Traboni, A. Nicosia, R. Cortese, and A. Vitelli. 2002. The human scavenger receptor class B type I is a novel candidate receptor for the hepatitis C virus. EMBO J 21:5017-25. 115.Shi, S. T., K. J. Lee, H. Aizaki, S. B. Hwang, and M. M. Lai. 2003. Hepatitis C virus RNA replication occurs on a detergent-resistant membrane that cofractionates with caveolin-2. J Virol 77:4160-8. 116.Shimizu, Y., K. Yamaji, Y. Masuho, T. Yokota, H. Inoue, K. Sudo, S. Satoh, and K. Shimotohno. 1996. Identification of the sequence on NS4A required for enhanced cleavage of the NS5A/5B site by hepatitis C virus NS3 protease. J Virol 70:127-32. 117.Shirota, Y., H. Luo, W. Qin, S. Kaneko, T. Yamashita, K. Kobayashi, and S. Murakami. 2002. Hepatitis C virus (HCV) NS5A binds RNA-dependent RNA polymerase (RdRP) NS5B and modulates RNA-dependent RNA polymerase activity. J Biol Chem 277:11149-55. 118.Shoji, I., T. Suzuki, M. Sato, H. Aizaki, T. Chiba, Y. Matsuura, and T. Miyamura. 1999. Internal processing of hepatitis C virus NS3 protein. Virology 254:315-23. 119.Smirnova, I. S., N. D. Aksenov, E. V. Kashuba, P. Payakurel, V. V. Grabovetsky, A. D. Zaberezhny, M. S. Vonsky, L. Buchinska, P. Biberfeld, J. Hinkula, and M. G. Isaguliants. 2006. Hepatitis C virus core protein transforms murine fibroblasts by promoting genomic instability. Cell Oncol 28:177-90. 120.Smirnova, I. S., N. D. Aksenov, M. S. Vonsky, and M. G. Isaguliants. 2006. Different transformation pathways of murine fibroblast NIH 3T3 cells by hepatitis C virus core and NS3 proteins. Cell Biol Int 30:915-9. 121.Stankovic-Djordjevic, D., N. Djordjevic, G. Tasic, M. Dinic, A. Karanikolic, and M. Pesic. 2007. Hepatitis C virus genotypes and the development of hepatocellular carcinoma. Chin J Dig Dis 8:42-7. 122.Tai, C. L., W. K. Chi, D. S. Chen, and L. H. Hwang. 1996. The helicase activity associated with hepatitis C virus nonstructural protein 3 (NS3). J Virol 70:8477-84. 123.Tanaka, M., M. Nagano-Fujii, L. Deng, S. Ishido, K. Sada, and H. Hotta. 2006. Single-point mutations of hepatitis C virus NS3 that impair p53 interaction and anti-apoptotic activity of NS3. Biochem Biophys Res Commun 340:792-9. 124.Taniguchi, S., S. Miyamoto, H. Sadano, and H. Kobayashi. 1991. Rat elongation factor 1 alpha: sequence of cDNA from a highly metastatic fos-transferred cell line. Nucleic Acids Res 19:6949. 125.Tanji, Y., M. Hijikata, S. Satoh, T. Kaneko, and K. Shimotohno. 1995. Hepatitis C virus-encoded nonstructural protein NS4A has versatile functions in viral protein processing. J Virol 69:1575-81. 126.Tanji, Y., T. Kaneko, S. Satoh, and K. Shimotohno. 1995. Phosphorylation of hepatitis C virus-encoded nonstructural protein NS5A. J Virol 69:3980-6. 127.Taremi, S. S., B. Beyer, M. Maher, N. Yao, W. Prosise, P. C. Weber, and B. A. Malcolm. 1998. Construction, expression, and characterization of a novel fully activated recombinant single-chain hepatitis C virus protease. Protein Sci 7:2143-9. 128.Teo, K. F., and P. J. Wright. 1997. Internal proteolysis of the NS3 protein specified by dengue virus 2. J Gen Virol 78:337-41. 129.Tomei, L., C. Failla, E. Santolini, R. De Francesco, and N. La Monica. 1993. NS3 is a serine protease required for processing of hepatitis C virus polyprotein. J Virol 67:4017-26. 130.Tomei, L., C. Failla, R. L. Vitale, E. Bianchi, and R. De Francesco. 1996. A central hydrophobic domain of the hepatitis C virus NS4A protein is necessary and sufficient for the activation of the NS3 protease. J Gen Virol 77:1065-70. 131.Wakita, T., T. Pietschmann, T. Kato, T. Date, M. Miyamoto, Z. Zhao, K. Murthy, A. Habermann, H. G. Krausslich, M. Mizokami, R. Bartenschlager, and T. J. Liang. 2005. Production of infectious hepatitis C virus in tissue culture from a cloned viral genome. Nat Med 11:791-6. 132.Walewski, J. L., T. R. Keller, D. D. Stump, and A. D. Branch. 2001. Evidence for a new hepatitis C virus antigen encoded in an overlapping reading frame. RNA 7:710-21. 133.Wang, C., P. Sarnow, and A. Siddiqui. 1994. A conserved helical element is essential for internal initiation of translation of hepatitis C virus RNA. J Virol 68:7301-7. 134.Wolk, B., D. Sansonno, H. G. Krausslich, F. Dammacco, C. M. Rice, H. E. Blum, and D. Moradpour. 2000. Subcellular localization, stability, and trans-cleavage competence of the hepatitis C virus NS3-NS4A complex expressed in tetracycline-regulated cell lines. J Virol 74:2293-304. 135.Yang, F., M. Demma, V. Warren, S. Dharmawardhane, and J. Condeelis. 1990. Identification of an actin-binding protein from Dictyostelium as elongation factor 1a. Nature 347:494-6. 136.Yang, S. H., C. G. Lee, M. K. Song, and Y. C. Sung. 2000. Internal cleavage of hepatitis C virus NS3 protein is dependent on the activity of NS34A protease. Virology 268:132-40. 137.Yi, M., and S. M. Lemon. 2003. Structure-function analysis of the 3' stem-loop of hepatitis C virus genomic RNA and its role in viral RNA replication. RNA 9:331-45. 138.You, S., D. D. Stump, A. D. Branch, and C. M. Rice. 2004. A cis-Acting Replication Element in the Sequence Encoding the NS5B RNA-Dependent RNA Polymerase Is Required for Hepatitis C Virus RNA Replication. J. Virol. 78:1352-1366. 139.Zein, N. N., and D. H. Persing. 1996. Hepatitis C genotypes: current trends and future implications. Mayo Clin Proc 71:458-62. 140.Zemel, R., S. Gerechet, H. Greif, L. Bachmatove, Y. Birk, A. Golan-Goldhirsh, M. Kunin, Y. Berdichevsky, I. Benhar, and R. Tur-Kaspa. 2001. Cell transformation induced by hepatitis C virus NS3 serine protease. J Viral Hepat 8:96-102. 141.黃少雍,2003,探討與C型肝炎病毒非結構性蛋白質NS4B專一性結合之細胞因子,碩士論文。 142.鄭如茜,2000,非結構性蛋白質NS5B和NS3參與C型肝炎病毒複製之分子機轉,博士論文。 143.張雅姿,2004,I. C型肝炎病毒非結構性蛋白質NS5A對Ras-ERK訊息傳遞路徑及下游分子的影響 II. C型肝炎病毒非結構性蛋白質NS4A與真核細胞轉譯延伸因子的相互作用關係,碩士論文。 144.王怡敏,2005,C型肝炎病毒非結構性蛋白質NS4A抑制轉譯與誘導病毒NS3蛋白質產生內部截切之作用機制,碩士論文。 | |
dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/29108 | - |
dc.description.abstract | C型肝炎病毒帶有一單股正向的RNA基因體,可編碼出一條多蛋白質前驅物,藉由細胞蛋白酶和病毒NS2-3及NS3蛋白酶的切割,產生單一具功能性的結構性及非結構性蛋白質,其中非結構性蛋白質NS4A為NS3蛋白酶的一個共同因子。NS3蛋白質被報導過具有自身內部截切的現象。在本研究中,證明了NS3(基因型1b)在NS4A存在時會進行內部截切,而NS3的蛋白酶活性為內部截切所必需,此蛋白酶活性可藉由自身或另一蛋白酶分子提供。截切後的氨基端產物具有較全長NS3高的細胞轉型能力。IPT402|S為NS3三個內部截切中最主要的切位,而NS3(T402A)點突變的細胞轉型能力明顯下降。另外,NS4A在病毒多蛋白質切割及NS3內部截切上扮演著不同的角色。NS4A的Ile-25、Val-26、Ile-29三個胺基酸殘基對於NS3內部截切和細胞轉型能力都是重要的。然而這些位置的突變對於病毒基因體的複製效率僅有些微的增加。本研究亦針對基因型2a、4a、5a及6a的NS3及NS4A蛋白質進行NS3內部截切的分析。另一方面,NS4A蛋白質已被證實具有抑制蛋白質轉譯的能力。本實驗室先前已利用GST pull-down分析鑑定出與NS4A作用的真核細胞延長因子eEF1A。在本研究中,除了證明NS4A與eEF1A的專一性交互作用,也發現NS4A藉由中央區域21至34個胺基酸殘基與eEF1A產生交互作用。NS4A抑制細胞及病毒的蛋白質轉譯。在轉譯系統中,外加純化的重組eEF1A蛋白質,可部分回復NS4A(21-34)的轉譯抑制作用。NS4A的轉譯抑制作用可能和慢性C型肝炎病人血清中,病毒蛋白質的低表現量有關,此結果也顯示eEF1A在C型肝炎病毒慢性感染中可能參與的角色。本研究證明了NS3及NS4A蛋白質在C型肝炎病毒複製及致病機轉上扮演多重的角色,可成為理想的治療藥物標的。 | zh_TW |
dc.description.abstract | The genomic RNA of hepatitis C virus (HCV) encodes the viral polyprotein precursor that undergoes proteolytic cleavage into structural and nonstructural proteins by cellular and the viral NS2-3 and NS3 proteases. NS4A is a cofactor of the NS3 protease. The NS3 protein was previously found to be internally cleaved but the mechanism is unclear. In this study, internal cleavages were demonstrated with the NS3 protein of genotype 1b in the presence of NS4A. Three potential cleavage sites were detected in the NS3 protein (genotype 1b) with IPT402|S being the major one. The internal cleavages required the polyprotein processing activity of NS3 protease that can be supplemented in trans. Mutational analysis demonstrated differential requirements of NS4A for the polyprotein processing and the internal cleavages of NS3, indicating that the mechanisms of NS4A involved in these two proteolytic cleavages are different. Furthermore, Ile-25, Val-26, and Ile-29 of the NS4A protein that were demonstrated to be involved in the interaction between NS3 and NS4A in culture cells are also important for the NS4A-dependent internal NS3 cleavages. These residues were also shown to be critical for the transforming activity of NS3, while mutations at these critical residues increased only slightly the efficiency of HCV replication. The internal cleavage-associated enhancement of the transforming activity of NS3 was significantly reduced when T402A substitution at the major internal cleavage site was introduced. Internal cleavage activity of the NS3-4A proteins of HCV genotypes 2a, 4a, 5a, and 6a were also examined. On the other hand, NS4A has been demonstrated to inhibit protein synthesis. In this study, a specific interaction between NS4A and eEF1A was demonstrated. The central domain from residues 21 to 34 of NS4A is the key player involved in the NS4A-mediated translation inhibition of host and the viral proteins. The translation inhibitory effect of NS4A(21-34) was relieved by the addition of purified recombinant eEF1A in an in vitro translation system. The study indicates a possible role of eEF1A in regulating HCV multiplication during a chronic infection. Taken together, the multiple roles of NS3 and NS4A involved in the viral multiplication and pathogenesis make them ideal molecular targets for HCV therapy. | en |
dc.description.provenance | Made available in DSpace on 2021-06-13T00:40:29Z (GMT). No. of bitstreams: 1 ntu-96-F87445110-1.pdf: 3040406 bytes, checksum: 4e34d670188506c651723b853fa46853 (MD5) Previous issue date: 2007 | en |
dc.description.tableofcontents | 口試委員會審定書.....i
中文摘要.....ii Abstract.....iii Contents.....v List of Tables.....vii List of Figures.....viii Chapter 1: Introduction.....1 1.1 General introduction for HCV.....1 1.2 Possible roles of the NS3-4A protease in HCV pathogenesis.....15 Chapter 2: Specific aims.....20 Chapter 3: Materials and Methods.....22 3.1 Kits.....22 3.2 Antibodies.....22 3.3 Cell lines.....23 3.4 Plasmids.....24 3.5 Transformation.....34 3.6 Expression of GST fusion proteins.....35 3.7 Purification of GST fusion proteins.....36 3.8 GST pull-down assay.....37 3.9 In vitro transcription.....37 3.10 Translation inhibition assay.....38 3.11 Restoration of translational inhibition.....38 3.12 DNA transfection.....39 3.13 RNA extraction and reverse transcription.....39 3.14 PCR and real-time PCR.....40 3.15 Luciferase activity assay.....41 3.16 Flotation assay.....41 3.17 Immunoprecipitation.....42 3.18 Western blot analysis.....43 3.19 Soft agar assay.....44 Chapter 4: Results.....45 4.1 Effects of NS4A-dependent internal NS3 cleavage on cell transformation and viral replication.....45 4.2 NS4A-dependent internal NS3 cleavage in various HCV genotypes.....57 4.3 Molcular mechanisms involved in translational inhibition of NS4A.....60 Chapter 5: Discussion.....69 5.1 Differential requirements of NS4A for internal NS3 cleavage and viral polyprotein processing.....69 5.2 Genotype-specific internal NS3 cleavage.....73 5.3 NS4A inhibits cap-dependent and HCV IRES-mediated translation through interacting with eEF1A.....74 Chapter 6: Tables and Figures.....79 Chapter 7: References.....114 Appendix: Curriculum Vitae.....133 | |
dc.language.iso | en | |
dc.title | 非結構性蛋白質NS3和NS4A參與C型肝炎病毒致病之分子機轉 | zh_TW |
dc.title | Molecular mechanisms of NS3 and NS4A proteins involved in the pathogenesis of hepatitis C virus | en |
dc.type | Thesis | |
dc.date.schoolyear | 95-2 | |
dc.description.degree | 博士 | |
dc.contributor.oralexamcommittee | 陳瑞華(Ruey-Hwa Chen),王維恭(Wei-Kung Wang),賴明陽(Ming-Yang Lai),林椒華(Sheng-Wei Lin),董馨蓮(Shin-Lian Doong) | |
dc.subject.keyword | C型肝炎病毒,非結構性蛋白質3,非結構性蛋白質4A,內部截切,轉譯抑制,致病機轉, | zh_TW |
dc.subject.keyword | hepatitis C virus,NS3,NS4A,internal cleavage,translational inhibition,pathogenesis, | en |
dc.relation.page | 132 | |
dc.rights.note | 有償授權 | |
dc.date.accepted | 2007-07-25 | |
dc.contributor.author-college | 醫學院 | zh_TW |
dc.contributor.author-dept | 微生物學研究所 | zh_TW |
顯示於系所單位: | 微生物學科所 |
文件中的檔案:
檔案 | 大小 | 格式 | |
---|---|---|---|
ntu-96-1.pdf 目前未授權公開取用 | 2.97 MB | Adobe PDF |
系統中的文件,除了特別指名其著作權條款之外,均受到著作權保護,並且保留所有的權利。