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  1. NTU Theses and Dissertations Repository
  2. 生命科學院
  3. 生化科學研究所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/26673
完整後設資料紀錄
DC 欄位值語言
dc.contributor.advisor吳世雄
dc.contributor.authorTzu-Chen Liuen
dc.contributor.author劉子晨zh_TW
dc.date.accessioned2021-06-08T07:20:15Z-
dc.date.copyright2008-07-30
dc.date.issued2007
dc.date.submitted2008-07-23
dc.identifier.citation1. Mason W. T. Fluorescent and Luminescent Probes for Biological Activity, 2nd ed., Academic Press, London, 1999
2. Zhang, J.; Campbell, R.E.; Ting, A.; Tsien, R.Y. Nat. Rev. Mol. Bio. 2002, 3, 906-918.
3. Domaille, D. W.; Que, E. L.; Chang C. J. Nat. Chem. Biol. 2008, 3,168-175.
4. Yang, L. C.; McRae, R.; Henary, M. M.; Patel, R.; Lai, B.; Vogt, S.; Fahrni, C. J. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 11179-11184.
5. Grynkiewicz, G.; Poenie, M.; Tsien, R. Y. J. Biol. Chem. 1985, 260, 3440-3450.
6. Tsien, R. Y.; Poenie, M. Trends Biochem. Sci. 1986, 11, 450-455.
7. (a) Lakowicz, J. R. Principles of Fluorescence Spectroscopy, 2nd ed.; Plenum: New York, 1999.
(b) Herman, B. Fluorescence Microscopy. 2nd ed; 1998.
8. Zlokarnik, G.; Negulescu, P. A.; Knapp, T. E.; Mere, L.; Burres, N.; Feng, L. X.; Whitney, M.; Roemer, K.; Tsien, R. Y. Science 1998, 279, 84-88.
9. Takakusa, H.; Kikuchi, K.; Urano, Y.; Sakamoto, S.; Yamaguchi, K.; Nagano, T. J. Am. Chem. Soc. 2002, 124, 1653-1657.
10. Takakusa, H.; Kikuchi, K.; Urano, Y.; Kojima, H.; Nagano, T. Chem. Eur. J. 2003, 9, 1479-1485.
11. Albers, A.E.; Okreglak, V. S.; Chang, C. J. J. Am. Chem. Soc. 2006, 128, 9640–9641
12. Baeyer, A. Ber. Dtsch. Chem. Ges. 1871, 4, 555-558.
13. Guilbault, G. G. In Practical Fluorescence, Marcel Dekker Inc.: New York, 1990.
14. Mineno, T.; Ueno, T.; Urano, Y.; Kojima, H.; Nagano, T. Org. Lett. 2006, 8, 5963-5966.
15. Takakusa, H.; Kikuchi, K.; Urano, Y.; Higuchi, T.; Nagano, T. Anal. Chem. 2001, 73, 939-942.
16. (a) Packard, B. Z.; Komoriya, A.; Toptygin, D. D.; Brand, L. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 11640-11645.
(b) Daugherty, D. L.; Gellman, S. H. J. Am. Chem. Soc. 1999, 121, 4325-4333.
(c) Zych, A. J.; Iverson, B. L. J. Am. Chem. Soc. 2000, 122, 8898-8909.
17. Packard, B. Z.; Toptygin, D. D.; Komoriya, A.; Brand, L. Biophys. Chem. 1997, 67, 167-176.
18. Sun, W.; Gee, K. R.; Klaubert, D. H.; Haugland, R. P. J. Org. Chem. 1997, 62, 6469-6475.
19. Coughtrie, M.W.; Sharp, S.; Maxwell, K.; Innes, N. P. Chem Biol Interact 1998, 109, 3-27.
20. Hanson, S. R.; Best, M. D.; Wong, C. H. Angew. Chem., Int. Ed. 2004, 43, 5736-5763.
21. (a) Schmidt, B.; Selmer, T.; Ingendoh, A.; von Figura, K. Cell 1995, 82, 271-278.
(b) Dierks, T.; Schmidt, B.; von Figura, K. Proc. Natl. Acad. Sci. USA 1997, 94, 11963-11968
22. Harrison, E. Annu. Rev. Nutr. 1998, 18, 259-276.
23. (a) Bensadoun, A. Annu. Rev. Nutr. 1991, 11, 217-237.
(b) Lowe, M. Annu. Rev. Nutr. 1997, 17, 259-276.
(c) Shah, J Annu. Rev. Phytopathol. 2005, 43, 229-260.
24. (a) Derewenda, U.; Derewenda, Z. S. Biochem. Cell. Biol. 1991, 69, 842-851.
(b) Derewenda, Z. S.; Sharp, A. M. Trends Biochem. Sci. 1993, 18, 20-25.
25. Jensen, R. G. Lipids 1983, 18,650-657.
26. Jaeger, K. E.; Dijkstra, B. W.; Reetz, M. T. Annu. Rev. Microbio. 1999, 53, 315-351.
27. Song, A.; Wang, X. B.; Lam, K. S. Tetrahedron Lett. 2003, 44,1755.
28. (a) Haughland, R. P. Biosensors with Fiberoptics, Humana Press, Clifton, NJ, 1991.
(b) Haughland, R. P. Handbook of Fluorescent Probes and Research Chemicals, Molecular Probes, Eugene, OR., 1992.
29. Adamczyk, M.; Fishpaugh, J. R.; Heuser, K. J. Bioconjugate Chem. 1997, 8, 253.
30. (a) Lyttle, M. H.; Carter, T. G.; Cook, R. M. Org. Process Res. Dev. 2001, 5, 45.
(b) Jiao, G. S.; Han, J. W.; Burgess, K. J. Org. Chem. 2003, 68, 8264.
31. Rossi, F. M.; Kao, J. P. Y. Bioconjugate Chem. 1997, 8, 495.
32. Adamczyk, M.; Chan, C. M.; Fino, J. R.; Mattingly, P. G. J. Org. Chem. 2000, 65, 596.
33. Ueno, Y.; Jiao, G. S.; Burgess, K. Synthesis 2004, 15, 2591.
34. Zheng, G.; Guo, Y. M.; Li, W. H. J. Am. Chem. Soc. 2007, 129, 10616-10617
35. Kice, J. L.; Anderson, J. M. J. Am. Chem. Soc. 1966, 88, 5242-5245
36. Liu, Y.; Lien, I. F.; Ruttgaizer, S.; Dove, P.; Taylor, S. D. Org. Lett. 2004, 6, 209– 212.
37. Hedayatullah, M.; Leveque, J. C.; Denivelle, L. Acad. Sci. Paris, Ser. C 1971, 273, 1444-1447.
38. Ram, S.; Ehrenkaufer, R. E. Synthesis 1988, 91-95.
39. (a) Ahmed, V.; Ispahany, M.; Ruttgaizer, S.; Guillemette, G.; Taylor, S. D. Anal. Biochem. 2005, 340, 80-88.
(b) Liu, Y.; Ahmed, V.; Hill, B.; Taylor, S. D. Org. Biomol. Chem. 2005, 3, 3329-3335.
40. Lee, J. C.; Lu, X. A.; Kulkami, S. S.; Wen, Y. S.; Hung, S. C. J. Am. Chem. Soc. 2004, 126, 476-477.
41. (a) Young, T.; Kiessling, L. L. Angew. Chem., Int. Ed. 2002, 41, 3449-3451.
(b) Tully, S. E.; Mabon, R.; Gama, C. I.; Tsai, S. M.; Liu, X.; Hsieh-Wilson,L. C. J. Am. Chem. Soc. 2004, 126, 7736-7737.
(c) Gama, C. I.; Tully, S. E.; Sotogaku, N.; Clark, P. M.; Rawat, M.; Vaidehi, N.; Goddard III, W. A.; Nishi, A.; Hsieh-Wilson, L. C. Nat. Chem. Biol. 2006, 2, 467-473.
(d) Rawat, M.; Gama, C. I.; Matson, J. B.; Hsieh-Wilson L. C. J. Am. Chem. Soc. 2008, 130, 2959-2961.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/26673-
dc.description.abstract比例測量 (ratiometric measurement) 是一種可以同時偵測兩種波長螢光強度以及計算兩者比例的量測方式,它可提供準確的數據、甚至是定量的偵測。為了要達成這樣的概念,探針 (probe) 必須要在與目標分子反應後,顯示出大的吸收或是放出波長的改變。這樣的策略,根據螢光共振能量傳播 (fluorescence resonance energy transfer),藉由兩個螢光團的架構,由香豆素 (coumarin) 提供者、環己烷連接橋、螢光素 (fluorescein) 接受者所組成。這樣的架構已經在許多螢光感應器被應用。然而,所有的先前成果,雖然有著相似的結構,卻都是冗長且浪費的從第一步合成自最後一步。所以為了開發一個更有效的模型,在這個研究分為兩個部份。首先,致力於開發「快速」合成螢光核心分子的步驟。接著,藉由在酚上面的兩個羥基,去接上不同的官能集團。最後,這個想法證明是有實用價值的,因為羥基具有化學反應活性,可以接脂肪酸、硫酸鹽、硫酸鹽保護基。進一步的螢光光譜亦證實螢光核心分子的放出波長在接上官能基前後有著大約 40 nm 的差異。此份工作的價格在於建立了一個可以偵測不同水解酵素的平台,並在研究的過程中,發現了利用一從未被開發的再結晶分離羧基螢光素 (carboxyfluorescien) 位向異構物 (regioisomers) 的方法,可以得到超過兩位數克數等級的產物。zh_TW
dc.description.abstractA ratiometric measurement, i.e. simultaneously recording of the fluorescence intensities at two wavelengths and calculation of their ratio, is a technique that can provide precise data and even quantitative detection. To carry out this idea, the probe must exhibit a large shift in its emission or excitation spectrum after it reacts with the target molecule. A strategy that is based on fluorescence resonance energy transfer (FRET) by using a two-fluorophore cassette comprised of a coumarin donor, a cyclohexane linker and a fluorescein acceptor has been utilized in many fluorescent sensors. However, with this structural similarity, all of the previous works were done by synthesizing from the first step to the last step, which is wasteful and tedious. Therefore, in order to establish a more efficient model, in this study, our work is separated into two parts. First, we focus on developing a fast procedure of synthesizing fluorescent probe core. Second, we utilize the two hydroxyl groups on the phenols to link with different functional groups. The conclusion shows the results to be practical as the hydroxyl group is chemically reactive and is able to link with fatty acid, sulfate and the protecting group of sulfate. Further fluorescence spectra also confirm that the emission wavelength of the fluorescent probe core differs by around 40 nm before/after the conjugation with functional groups. The value of this work is the establishment of a platform suitable for detecting various hydrolytic enzymes, and during the process of this study, we discovered a method to separate the regioisomers of carboxyfluorescien via fractional recrystallization in a double-digit gram scale.en
dc.description.provenanceMade available in DSpace on 2021-06-08T07:20:15Z (GMT). No. of bitstreams: 1
ntu-96-R95b46024-1.pdf: 8051111 bytes, checksum: fcfc5296f42c11cff03e8ad1567c0be4 (MD5)
Previous issue date: 2007
en
dc.description.tableofcontents口試委員會審定書…………………………………………………………..………Ⅰ
中文摘要…………………………………………………………………..…………Ⅱ
英文摘要………………………………………………………………………..……Ⅲ
Catalog………………………………………………………………………….……Ⅳ
List of Figures………………………………………………………………….…….Ⅵ
List of Tables…………………………………………………….………………..,,,,,Ⅶ
Abbreviations…………………………………………………………...……………Ⅷ
1. Introduction............................................................................................................1
1.1 Fluorescent probes for biological activity……………………………………..1
1.2 Ratiometric measurement……………………………………………………...2
1.3 FRET…………………………………………………………………………..2
1.4 The design of the core…………………………………………………………4
1.5 Research target………………………………………………………………...8
1.5.1 Sulfatase…………………………………...…………………………….8
1.5.2 Lipase……………………………………...…………………………...10
2. Result and Discussion…………………………………………………………...12
2.1 Strategies of synthesizing compound 6............................................................12
2.2 Methods of synthesizing compound 6..............................................................14
2.3 Strategies of conjugating compound 6 to various functional groups...............28
2.3.1 Strategies of synthesizing compound 9.................................................28
2.3.2 Methods of synthesizing compound 9...................................................29
2.4 Fluorescence spectrum……………………………………………………….35
2.5 Conclusion……………………………………………………………………37
3. Experimental section……………………………………………………………38
Reference…………………………………………………………………………….49
Appendix…………………………………………………………………………….52
dc.language.isoen
dc.subject核心分子zh_TW
dc.subject螢光探針zh_TW
dc.subject螢光共振能量傳播zh_TW
dc.subject比例測量zh_TW
dc.subjectcoreen
dc.subjectratiometric measurementen
dc.subjectfluorescence resonance energy transferen
dc.subjectfluorescent probesen
dc.title發展含螢光探針核心結構的水解酵素基質之快速合成方法zh_TW
dc.titleThe rapid synthesis of a fluorescent probe core for hydrolytic enzymesen
dc.typeThesis
dc.date.schoolyear96-2
dc.description.degree碩士
dc.contributor.oralexamcommittee羅禮強,林俊宏
dc.subject.keyword核心分子,螢光探針,螢光共振能量傳播,比例測量,zh_TW
dc.subject.keywordcore,fluorescent probes,fluorescence resonance energy transfer,ratiometric measurement,en
dc.relation.page78
dc.rights.note未授權
dc.date.accepted2008-07-25
dc.contributor.author-college生命科學院zh_TW
dc.contributor.author-dept生化科學研究所zh_TW
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