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完整後設資料紀錄
DC 欄位 | 值 | 語言 |
---|---|---|
dc.contributor.advisor | 鄭石通(Shih-Tong Jeng) | |
dc.contributor.author | Pin-Yang Tu | en |
dc.contributor.author | 凃品揚 | zh_TW |
dc.date.accessioned | 2021-06-08T03:53:39Z | - |
dc.date.copyright | 2018-08-21 | |
dc.date.issued | 2018 | |
dc.date.submitted | 2018-08-16 | |
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dc.identifier.uri | http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/21930 | - |
dc.description.abstract | 面對掠食者與病原菌的危害,植物演化出複雜的防禦機制。其中植物胜肽賀爾蒙參與在植物逆境訊息的傳導以及防禦蛋白的誘導。首個非茄科的HypSys在甘藷品系Ipomoea batatas cv. Georgia Jet中被發現,在本實驗室使用的甘藷品系Ipomoea batatas cv. Tainung 57 (台農57號,TN57)也成功釣取到IbpreproHypSys基因序列。實驗室前人證實傷害會促使成熟IbHypSys被釋放,使jasmonic acid (JA)生合成路徑被啟動,並導致H2O2的累積,進一步誘導防禦基因IPO的表現,影響木質素的生合成,使斜紋夜盜蛾的生長與發育受到抑制。本實驗利用大量表現IbpreproHypSys的甘藷轉植株建立轉錄體 (transcriptome)資料庫,篩選與IbpreproHypSys相關的候選基因,預測有19,710個contigs在傷害後的轉殖型甘藷具有更高的表現量 (fold change > 2 ),我們選擇其中9個候選基因進行後續實驗,當中IbMYB86、IbWRI1、IbSBT1.4、IbSWEET2a、IbUGT75C1會受到傷害以及短胜肽IbHypSysIV處理誘導,而IbSBT1.9、IbSBT5.3、IbPSKR2、 IbLRRAT2G33170則會在IbpreproHypSys大量表現型甘藷中被誘導。而當中多個候選基因被證實與病原菌的抗性相關,推測甘藷中的IbHypSys可能參與病原菌入侵的防禦機制。而依據候選基因在其他物種的研究,推測甘藷的IbHypSys可能具有多種訊息傳遞路徑或是調控不同反應機制的功能。 | zh_TW |
dc.description.abstract | Plants have evolved defense mechanisms for survival against various kinds of predators and pathogens. It is discovered that plant peptide hormones induce defense genes and signal transmission in adversity. In Solanaceae, systemin participates in the defense mechanism of wounding. In Arabidopsis thaliana, AtPEP1 participates in the defense mechanism against pathogen. The hydroxyproline-rich glycopeptides (HypSys) are glycopeptides containing 18-20 amino acids in length, and they are processed from larger precursors. The first non-solanaceous HypSys was found in sweet potato, Ipomoea batatas cv. Georgia Jet, and it was called IbHypSys, whose precursor is IbpreproHypSys. Our groups also found IbpreproHypSys in Ipomoea batatas cv. Tainung 57. IbHypSys induced the production of jasmonic acid (JA), which caused the accumulation of H2O2 and ipomoelin (IPO) expression to protect plants from insect attacks. In this study, the transcriptome databases of sweet potato have been established. The gene expression between wild-type and transgenic sweet potato overexpressing IbpreproHypSys after 2 hr wounding was compared, and IbpreproHypSys-related transcription factors, receptors and proteases, including IbMYB86, IbWRI1, IbSBT1.4, IbSBT1.9, IbSBT5.3, IbSWEET2a, IbUGT75C1, IbPSKR2, IbLRRAT2G33170, were specially identified. Some of these candidate genes were induced upon wounding and synthetic IbHypSysIV treatment. In addition, previous studies indicated that some of these candidate genes were associated with pathogen resistance. In conclusion, IbHypSys may participates in the defense mechanism of pathogen infection. | en |
dc.description.provenance | Made available in DSpace on 2021-06-08T03:53:39Z (GMT). No. of bitstreams: 1 ntu-107-R05b42002-1.pdf: 2633352 bytes, checksum: 5b713493145b583bbe2180ec3e21c405 (MD5) Previous issue date: 2018 | en |
dc.description.tableofcontents | 致謝 I
中文摘要 II Abstract III 第一章 前言 1 一、 植物的傷害防禦機制 1 二、 胜肽賀爾蒙 2 三、 研究動機與方向 4 第二章 材料與方法 5 一、 植物材料與處理 5 1. 甘藷 5 二、 實驗方法 5 1. 甘藷葉片Total RNA之萃取 5 2. 聚合酶連鎖反應 (Polymerase chain reaction, PCR) 及即時定量聚合酶連鎖反應 (Quantitative real-time PCR) 7 3. 轉殖甘藷所用之質體構築 9 4. 農桿菌之轉型 11 5. 甘藷轉殖 12 6. 甘藷轉錄體資料庫建立與RNA sequencing 13 第三章 結果 16 一、 轉錄體建立 16 二、 IbpreproHypSys相關的基因選取 17 三、 候選基因在傷害處理以及IbHypSysIV處理下的表達 19 第四章 討論 20 一、 甘藷的逆境防禦機制 20 二、 IbHypSys在傷害逆境下的調控 20 三、 IbpreproHypSys相關候選基因 21 四、 IbSBT1.4、IbSBT1.9和IbSBT5.3與IbHypSys之間的關係 21 五、 IbMYB86、IbWRI1與IbHypSys之間的關係 22 六、 IbSWEET2a與IbHypSys之間的關係 23 七、 花色苷合成相關基因-IbUGT75C1與IbHypSys之間的關係 24 八、 IbPSKR2和IbLRRAT2G33170與 IbHypSys無直接關係 25 九、 結論 26 第五章 結果圖表 27 第六章 文獻參考 64 圖表目錄 表 一、引子序列表 27 表 二、Contig組裝基本數據 30 圖 一、甘藷在傷害與IbHypSysIV處理下IbMYB86表現量 31 圖 二、甘藷在傷害與IbHypSysIV處理下IbWRI1表現量 33 圖 三、甘藷在傷害與IbHypSysIV處理下IbPSKR2表現量 35 圖 四、甘藷在傷害與IbHypSysIV處理下IbLRRAT2G33170表現量 37 圖 五、甘藷在傷害與IbHypSysIV處理下IbSBT1.4表現量 39 圖 六、甘藷在傷害與IbHypSysIV處理下IbSBT1.9表現量 41 圖 七、甘藷在傷害與IbHypSysIV處理下IbSBT5.3表現量 43 圖 八、甘藷在傷害與IbHypSysIV處理下IbSWEET2a表現量 45 圖 九、甘藷在傷害與IbHypSysIV處理下IbUGT75C1表現量 47 附表 一、檢體的編號和處理 49 附表 二、原始資料基本數據 50 附表 三、原始數據剪切修飾後基本數據 51 附表 四、候選基因的表現差異倍數以及annotation結果 52 附表 五、候選基因的GO分析結果 53 附圖 一、Agilent 2100 Bioanalyzer微流體電泳分析儀檢測樣本品質 57 附圖 二、Library品質檢測 59 附圖 三、定序品質檢測與GC分布情形 62 附圖 四、分群前後contigs長度分布情形 63 | |
dc.language.iso | zh-TW | |
dc.title | 利用 de novo RNA Sequencings 分析甘藷在傷害下受IbHypSys 誘導之基因 | zh_TW |
dc.title | Analysis of IbHypSys-Induced Genes in Sweet Potato (Ipomoea batatas cv. Tainung 57) upon Wounding by de novo RNA Sequencings | en |
dc.type | Thesis | |
dc.date.schoolyear | 106-2 | |
dc.description.degree | 碩士 | |
dc.contributor.oralexamcommittee | 楊淑怡,林振祥,陳玉琪 | |
dc.subject.keyword | 甘藷,傷害,轉錄組,IbHypSys, | zh_TW |
dc.subject.keyword | sweet potato,wound,transcriptome,IbHypSys, | en |
dc.relation.page | 72 | |
dc.identifier.doi | 10.6342/NTU201801959 | |
dc.rights.note | 未授權 | |
dc.date.accepted | 2018-08-16 | |
dc.contributor.author-college | 生命科學院 | zh_TW |
dc.contributor.author-dept | 植物科學研究所 | zh_TW |
顯示於系所單位: | 植物科學研究所 |
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