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  1. NTU Theses and Dissertations Repository
  2. 醫學院
  3. 微生物學科所
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/16042
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dc.contributor.advisor鄧述諄(Shu-Chun Teng)
dc.contributor.authorYa-Lan Changen
dc.contributor.author張雅嵐zh_TW
dc.date.accessioned2021-06-07T17:59:01Z-
dc.date.copyright2012-09-19
dc.date.issued2012
dc.date.submitted2012-08-09
dc.identifier.citationAstuti, D., Latif, F., Dallol, A., Dahia, P.L., Douglas, F., George, E., Skoldberg, F., Husebye, E.S., Eng, C., and Maher, E.R. (2001). Gene mutations in the succinate dehydrogenase subunit SDHB cause susceptibility to familial pheochromocytoma and to familial paraganglioma. Am J Hum Genet 69, 49-54.
Barnard, E., McFerran, N.V., Trudgett, A., Nelson, J., and Timson, D.J. (2008). Detection and localisation of protein-protein interactions in Saccharomyces cerevisiae using a split-GFP method. Fungal Genet Biol 45, 597-604.
Bayley, J.P., Devilee, P., and Taschner, P.E. (2005). The SDH mutation database: an online resource for succinate dehydrogenase sequence variants involved in pheochromocytoma, paraganglioma and mitochondrial complex II deficiency. BMC Med Genet 6, 39.
Bayley, J.P., Kunst, H.P., Cascon, A., Sampietro, M.L., Gaal, J., Korpershoek, E., Hinojar-Gutierrez, A., Timmers, H.J., Hoefsloot, L.H., Hermsen, M.A., et al. (2010). SDHAF2 mutations in familial and sporadic paraganglioma and phaeochromocytoma. Lancet Oncol 11, 366-372.
Baysal, B.E., Ferrell, R.E., Willett-Brozick, J.E., Lawrence, E.C., Myssiorek, D., Bosch, A., van der Mey, A., Taschner, P.E., Rubinstein, W.S., Myers, E.N., et al. (2000). Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma. Science 287, 848-851.
Burnichon, N., Briere, J.J., Libe, R., Vescovo, L., Riviere, J., Tissier, F., Jouanno, E., Jeunemaitre, X., Benit, P., Tzagoloff, A., et al. (2010). SDHA is a tumor suppressor gene causing paraganglioma. Hum Mol Genet 19, 3011-3020.
DeRisi, J.L., Iyer, V.R., and Brown, P.O. (1997). Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278, 680-686.
Gebert, N., Gebert, M., Oeljeklaus, S., von der Malsburg, K., Stroud, D.A., Kulawiak, B., Wirth, C., Zahedi, R.P., Dolezal, P., Wiese, S., et al. (2011). Dual Function of Sdh3 in the Respiratory Chain and TIM22 Protein Translocase of the Mitochondrial Inner Membrane. Molecular Cell 44, 811-818.
Gerald, D., Berra, E., Frapart, Y.M., Chan, D.A., Giaccia, A.J., Mansuy, D., Pouyssegur, J., Yaniv, M., and Mechta-Grigoriou, F. (2004). JunD reduces tumor angiogenesis by protecting cells from oxidative stress. Cell 118, 781-794.
Hao, H.X., Khalimonchuk, O., Schraders, M., Dephoure, N., Bayley, J.P., Kunst, H., Devilee, P., Cremers, C.W., Schiffman, J.D., Bentz, B.G., et al. (2009). SDH5, a gene required for flavination of succinate dehydrogenase, is mutated in paraganglioma. Science 325, 1139-1142.
Hensen, E.F., and Bayley, J.P. (2011). Recent advances in the genetics of SDH-related paraganglioma and pheochromocytoma. Fam Cancer 10, 355-363.
Ishii, T., Yasuda, K., Akatsuka, A., Hino, O., Hartman, P.S., and Ishii, N. (2005). A mutation in the SDHC gene of complex II increases oxidative stress, resulting in apoptosis and tumorigenesis. Cancer Res 65, 203-209.
Josse, L., Li, X., Coker, R.D., Gourlay, C.W., and Evans, I.H. (2011). Transcriptomic and phenotypic analysis of the effects of T-2 toxin on Saccharomyces cerevisiae: evidence of mitochondrial involvement. FEMS Yeast Res 11, 133-150.
Kaelin, W.G., Jr., and Ratcliffe, P.J. (2008). Oxygen sensing by metazoans: the central role of the HIF hydroxylase pathway. Mol Cell 30, 393-402.
Koning, A.J., Lum, P.Y., Williams, J.M., and Wright, R. (1993). DiOC6 staining reveals organelle structure and dynamics in living yeast cells. Cell Motil Cytoskeleton 25, 111-128.
Kresnowati, M.T.A.P., van Winden, W.A., Almering, M.J.H., ten Pierick, A., Ras, C., Knijnenburg, T.A., Daran-Lapujade, P., Pronk, J.T., Heijnen, J.J., and Daran, J.M. (2006). When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation. Mol Syst Biol 2.
Kubo, Y., Takagi, H., and Nakamori, S. (2000). Effect of gene disruption of succinate dehydrogenase on succinate production in a sake yeast strain. J Biosci Bioeng 90, 619-624.
Lea, D.E., and Coulson, C.A. (1949). The Distribution of the Numbers of Mutants in Bacterial Populations. J Genet 49, 264-285.
Martin, T.P., Irving, R.M., and Maher, E.R. (2007). The genetics of paragangliomas: a review. Clin Otolaryngol 32, 7-11.
Meisinger, C., Pfanner, N., and Truscott, K.N. (2006). Isolation of yeast mitochondria. Methods Mol Biol 313, 33-39.
Momose, Y., and Iwahashi, H. (2001). Bioassay of cadmium using a DNA microarray: genome-wide expression patterns of Saccharomyces cerevisiae response to cadmium. Environ Toxicol Chem 20, 2353-2360.
Niemann, S., and Muller, U. (2000). Mutations in SDHC cause autosomal dominant paraganglioma, type 3. Nat Genet 26, 268-270.
Oliveira, E.M., Martins, A.S., Carvajal, E., and Bon, E.P. (2003). The role of the GATA factors Gln3p, Nil1p, Dal80p and the Ure2p on ASP3 regulation in Saccharomyces cerevisiae. Yeast 20, 31-37.
Quinlan, C.L., Orr, A.L., Perevoshchikova, I.V., Treberg, J.R., Ackrell, B.A., and Brand, M.D. (2012). Mitochondrial complex II can generate reactive oxygen species at high rates in both the forward and reverse reactions. J Biol Chem.
Rintala, E., Toivari, M., Pitkanen, J.P., Wiebe, M.G., Ruohonen, L., and Penttila, M. (2009). Low oxygen levels as a trigger for enhancement of respiratory metabolism in Saccharomyces cerevisiae. BMC Genomics 10.
Runge, K.W., and Zakian, V.A. (1989). Introduction of Extra Telomeric DNA-Sequences into Saccharomyces-Cerevisiae Results in Telomere Elongation. Mol Cell Biol 9, 1488-1497.
Rutter, J., Winge, D.R., and Schiffman, J.D. (2010). Succinate dehydrogenase - Assembly, regulation and role in human disease. Mitochondrion 10, 393-401.
Scherens, B., Feller, A., Vierendeels, F., Messenguy, F., and Dubois, E. (2006). Identification of direct and indirect targets of the Gln3 and Gat1 activators by transcriptional profiling in response to nitrogen availability in the short and long term. FEMS Yeast Res 6, 777-791.
Selak, M.A., Armour, S.M., MacKenzie, E.D., Boulahbel, H., Watson, D.G., Mansfield, K.D., Pan, Y., Simon, M.C., Thompson, C.B., and Gottlieb, E. (2005). Succinate links TCA cycle dysfunction to oncogenesis by inhibiting HIF-alpha prolyl hydroxylase. Cancer Cell 7, 77-85.
Sickmann, A., Reinders, J., Wagner, Y., Joppich, C., Zahedi, R., Meyer, H.E., Schonfisch, B., Perschil, I., Chacinska, A., Guiard, B., et al. (2003). The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100, 13207-13212.
Slane, B.G., Aykin-Burns, N., Smith, B.J., Kalen, A.L., Goswami, P.C., Domann, F.E., and Spitz, D.R. (2006). Mutation of succinate dehydrogenase subunit C results in increased O2.-, oxidative stress, and genomic instability. Cancer Res 66, 7615-7620.
Walker, D.W., Hajek, P., Muffat, J., Knoepfle, D., Cornelison, S., Attardi, G., and Benzer, S. (2006). Hypersensitivity to oxygen and shortened lifespan in a Drosophila mitochondrial complex II mutant. Proc Natl Acad Sci U S A 103, 16382-16387.
dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/16042-
dc.description.abstractHereditary paraganglioma (PGL) is a rare tumor that is mostly benign and mainly arises in the head, neck and abdomen. The first gene shown to be directly linked to PGL syndrome was SDHD. 87–100% of SDHD mutation carriers develop tumors. However, the exact mechanism for tumorigenesis of PGL is elusive. SDHD encodes a subunit of the mitochondrial tricarboxylic acid cycle enzyme, succinate dehydrogenase (SDH), which is a complex II component of the electron transport chain. In yeast Saccharomyces cerevisiae, Sdh4 is an ortholog of hSDHD, which major performs the succinate dehydrogenase function in the Sdh complex. Here we discovered a yeast mitochondrial novel protein, Shh4/Ylr164w, which displays higher sequence conservation to hSDHD than Sdh4. The protein expression level of Shh4 is increased when cells enter aerobic respiration. In nonfermentable carbon source, deletion of SHH4 further decreases the growth of sdh4△ cells. Deletion of SHH4 further decreases the mitochondrial membrane potential of sdh4△ cells in stationary phase. Deletion of SDH4 upregulates SHH4 expression. Furthermore, SHH4 overexpression rescues the inviable phenotype of sdh4△ upon growth on a nonfermentable carbon source. Shh4 is associated with Sdh3 and deletion of SDH4 increases the interaction between Sdh3 and Shh4. We also investigated the mechanism of PGL tumorigenesis by using S. cerevisiae as a model organism. As our result showed, the level of reactive oxygen species (ROS) and mutation frequency were increased in the SDH4 and SHH4 double-deleted cells. Altogether; these results demonstrate that Shh4 is another subunit of succinate dehydrogenase in yeast. Our data suggest that the deficiency of hSDHD/Sdh4p/Shh4p may result in an increased production of ROS which contributes to an increase in mutation frequency, genome instability, and PGL tumorigenesis.en
dc.description.provenanceMade available in DSpace on 2021-06-07T17:59:01Z (GMT). No. of bitstreams: 1
ntu-101-R99445112-1.pdf: 1542246 bytes, checksum: 00d365108fe452b6b5d2900f28d46660 (MD5)
Previous issue date: 2012
en
dc.description.tableofcontents論文口試委員審定書 I
致謝 II
摘要 III
Abstract IV
Contents VI
Introduction 1
Materials and Methods 5
Yeast strains and Media 5
Plasmid construction 6
Yeast transformation 6
E. coli transformation 7
Yeast mating and tetrad dissection 7
Protein extraction by TCA immunoprecipitation 8
Western blot analysis 8
Spotting assay 9
Co-immunoprecipitation from mitochondrial lysates 9
Analysis of membrane potential 10
Analysis of ROS production 11
Measurement of mutation frequency 11
Results 13
Yeast Shh4 displays stronger sequence conservation to hSDHD than yeast Sdh4 13
Shh4p is upregulated under several stresses 13
Shh4 expression is increased when cells enter aerobic respiration 14
Deletion of SHH4 further decreases the growth and mitochondrial membrane potential of sdh4△ cells 15
Upregulation of SHH4 in sdh4△ cells rescue the inviable phenotype of sdh4△ 17
Deletion of SDH4 increases the interaction between Sdh3 and Shh4 18
Lacking Shh4 in sdh4△ cells can further decrease the stability of Sdh3 19
Double deletions of SDH4 and SHH4 increase ROS generation and contribute to mutator phenotype 20
hSDHD is not expressed in Saccharomyces cerevisiae 21
sdh4 (Y120C) is a loss function mutation, but plasmids bearing shh4 (Y112C) or shh4 (G104D) is poorly expressed in Saccharomyces cerevisiae 22
Discussions 23
Table 27
Figures 29
References 44
Appendix 48
dc.language.isoen
dc.subject突變機率zh_TW
dc.subject遺傳性副神經節瘤zh_TW
dc.subject腫瘤形成zh_TW
dc.subject琥珀酸脫氫&#37238zh_TW
dc.subject複合體zh_TW
dc.subject粒線體zh_TW
dc.subject活性氧化物zh_TW
dc.subjecttumorigenesisen
dc.subjectmutation frequencyen
dc.subjectreactive oxygen speciesen
dc.subjectmitochondriaen
dc.subjectSDH complexen
dc.subjectHereditary Paragangliomaen
dc.title利用酵母菌系統探討人類SDHD(Sdh4/Shh4)參與遺傳性副神經節瘤之機制zh_TW
dc.titleYeast as a Model to Investigate the Mechanism of hSDHD(Sdh4/Shh4)-mediated Hereditary Paragangliomaen
dc.typeThesis
dc.date.schoolyear100-2
dc.description.degree碩士
dc.contributor.oralexamcommittee李立仁,李財坤,黃偉邦,婁培人
dc.subject.keyword遺傳性副神經節瘤,腫瘤形成,琥珀酸脫氫&#37238,複合體,粒線體,活性氧化物,突變機率,zh_TW
dc.subject.keywordHereditary Paraganglioma,tumorigenesis,SDH complex,mitochondria,reactive oxygen species,mutation frequency,en
dc.relation.page48
dc.rights.note未授權
dc.date.accepted2012-08-09
dc.contributor.author-college醫學院zh_TW
dc.contributor.author-dept微生物學研究所zh_TW
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