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  1. NTU Theses and Dissertations Repository
  2. 重點科技研究學院
  3. 積體電路設計與自動化學位學程
請用此 Handle URI 來引用此文件: http://tdr.lib.ntu.edu.tw/jspui/handle/123456789/103303
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dc.contributor.advisor郭斯彥zh_TW
dc.contributor.advisorSy-Yen Kuoen
dc.contributor.author韓家典zh_TW
dc.contributor.authorChia-Tien Hanen
dc.date.accessioned2026-08-10T16:29:52Z-
dc.date.available2026-08-11-
dc.date.copyright2026-08-10-
dc.date.issued2026-
dc.date.submitted2026-07-31 00:00:00-
dc.identifier.citation[1] Y. Zhu, Y. Xu, F. Yu, Q. Liu, S. Wu, and L. Wang, “Deep Graph Contrastive Representation Learning,” arXiv preprint arXiv:2006.04131, 2020.

[2] Y. Zhu, Y. Xu, F. Yu, Q. Liu, S. Wu, and L. Wang, “Graph Contrastive Learning with Adaptive Augmentation,” in Proceedings of the Web Conference 2021, 2021, pp. 2069–2080.

[3] J. Xia, L. Wu, G. Wang, J. Chen, and S. Z. Li, “ProGCL: Rethinking Hard Negative Mining in Graph Contrastive Learning,” in Proceedings of the 39th International Conference on Machine Learning, ser. Proceedings of Machine Learning Research, vol. 162. PMLR, 2022.

[4] W.-Z. Li, C.-D. Wang, H. Xiong, and J.-H. Lai, “HomoGCL: Rethinking Homophily in Graph Contrastive Learning,” in Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023, pp. 1341–1352.

[5] Z. Wang, D. Yu, S. Shen, S. Zhang, H. Liu, S. Yao, and M. Guo, “Select Your Own Counterparts: Self-supervised Graph Contrastive Learning with Positive Sampling,” IEEE Transactions on Neural Networks and Learning Systems, vol. 36, no. 4, pp. 6858–6872, 2025.

[6] J. Zhuo, F. Qin, C. Cui, K. Fu, B. Niu, M. Wang, Y. Guo, C. Wang, Z. Wang, X. Cao, et al., “Improving Graph Contrastive Learning via Adaptive Positive Sampling,” in Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2024, pp. 23179–23187.

[7] B. Perozzi, R. Al-Rfou, and S. Skiena, “DeepWalk: Online Learning of Social Representations,” in Proceedings of the 20th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2014, pp. 701–710.

[8] A. Grover and J. Leskovec, “node2vec: Scalable Feature Learning for Networks,” in Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016, pp. 855–864.

[9] T. N. Kipf and M. Welling, “Semi-supervised Classification with Graph Convolutional Networks,” in International Conference on Learning Representations (ICLR), 2017.

[10] W. Hamilton, Z. Ying, and J. Leskovec, “Inductive Representation Learning on Large Graphs,” in Advances in Neural Information Processing Systems (NIPS), 2017, pp. 1024–1034.

[11] P. Veličković, G. Cucurull, A. Casanova, A. Romero, P. Liò, and Y. Bengio, “Graph Attention Networks,” in International Conference on Learning Representations (ICLR), 2018.

[12] K. Xu, W. Hu, J. Leskovec, and S. Jegelka, “How Powerful Are Graph Neural Networks?” in International Conference on Learning Representations (ICLR), 2019.

[13] P. Veličković, W. Fedus, W. L. Hamilton, P. Liò, Y. Bengio, and R. D. Hjelm, “Deep Graph Infomax,” arXiv preprint arXiv:1809.10341, 2018.

[14] K. Hassani and A. H. Khasahmadi, “Contrastive Multi-View Representation Learning on Graphs,” in International Conference on Machine Learning. PMLR, 2020, pp. 4116–4126.

[15] Y. You, T. Chen, Y. Sui, T. Chen, Z. Wang, and Y. Shen, “GraphCL: Graph Contrastive Learning with Augmentations,” in Advances in Neural Information Processing Systems (NeurIPS), vol. 33, 2020.

[16] A. van den Oord, Y. Li, and O. Vinyals, “Representation Learning with Contrastive Predictive Coding,” arXiv preprint arXiv:1807.03748, 2018.

[17] S. Thakoor, C. Tallec, M. G. Azar, M. Azabou, E. L. Dyer, R. Munos, P. Veličković, and M. Valko, “Large-scale Representation Learning on Graphs via Bootstrapping,” in International Conference on Learning Representations, 2022.

[18] P. Bielak, T. Kajdanowicz, and N. V. Chawla, “Graph Barlow Twins: A Self-supervised Representation Learning Framework for Graphs,” Knowledge-Based Systems, vol. 256, p. 109631, 2022.

[19] C. Niu, G. Pang, and L. Chen, “Affinity Uncertainty-based Hard Negative Mining in Graph Contrastive Learning,” IEEE Transactions on Neural Networks and Learning Systems, vol. 35, no. 9, pp. 11681–11691, 2024.

[20] Y. Ma, M. Chen, and X. Li, “DropMix: Better Graph Contrastive Learning with Harder Negative Samples,” in 2023 IEEE International Conference on Data Mining Workshops (ICDMW). IEEE, 2023, pp. 1105–1112.

[21] M. Liu, Y. Lin, J. Liu, B. Liu, Q. Zheng, and J. S. Dong, “B2-Sampling: Fusing Balanced and Biased Sampling for Graph Contrastive Learning,” in Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023, pp. 1489–1500.

[22] Y. Huang, J. Zhao, D. He, D. Jin, Y. Huang, and Z. Wang, “Does GCL Need a Large Number of Negative Samples? Enhancing Graph Contrastive Learning with Effective and Efficient Negative Sampling,” in Proceedings of the AAAI Conference on Artificial Intelligence, vol. 39, no. 16, 2025, pp. 17511–17518.

[23] Y. Zhao, C. Wu, L. Zhang, and N. Yang, “Negative Metric Learning for Graphs,” arXiv preprint arXiv:2505.10307, 2025.

[24] T. Chen, S. Kornblith, M. Norouzi, and G. Hinton, “A Simple Framework for Contrastive Learning of Visual Representations,” in International Conference on Machine Learning. PMLR, 2020, pp. 1597–1607.

[25] Z. Yang, W. Cohen, and R. Salakhutdinov, “Revisiting Semi-supervised Learning with Graph Embeddings,” in International Conference on Machine Learning. PMLR, 2016, pp. 40–48.

[26] O. Shchur, M. Mumme, A. Bojchevski, and S. Günnemann, “Pitfalls of Graph Neural Network Evaluation,” arXiv preprint arXiv:1811.05868, 2018.
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dc.identifier.urihttp://tdr.lib.ntu.edu.tw/jspui/handle/123456789/103303-
dc.description.abstract圖對比學習 (Graph Contrastive Learning, GCL) 已成為圖資料自監督表示學習的重要方法。在節點層級的 InfoNCE 式圖對比學習中,模型通常將同一節點在不同增強視圖中的表示視為正樣本,並將其他節點視為負樣本。然而,許多被視為負樣本的節點對實際上可能屬於相同類別,形成偽陰性(false negative) 問題。這些錯誤的負樣本會對同類節點施加排斥力,可能影響表示空間與節點分類表現。
現有偽陰性處理方法大多從當前嵌入相似度或靜態資訊來判斷節點對關係。這些方法提供了重要且有效的線索,但較少有研究系統性地比較不同類型的訊號是否能找出不同的偽陰性候選,以及這些訊號在組合後是否具有互補性。本論文因此將偽陰性選擇分成三類無標籤訊號:embedding-based、structural、以及 temporal training dynamics,並比較三者的選擇品質與互補性。
我們設計多種節點對分數,包括 embedding similarity、neighborhood overlap、drawdown、trajectory variance 等。實驗分析每個訊號的偽陰性選擇品質,並進一步比較 Union、Vote 與 Intersect 三種 multi-signal 組合策略在不同選擇數量下的行為。結果顯示 embedding 與 structural 訊號通常能提供較可靠的候選,而 temporal 訊號能提供少量獨特但較不穩定的資訊。三種組合策略呈現不同的 precision、coverage 與 downstream performance 取捨。在合適的選擇數量下,本論文提出的多訊號選擇框架能改善多個 GCL 模型的節點分類表現,並可作為靈活的 plug-and-play 元件。
zh_TW
dc.description.abstractGraph Contrastive Learning (GCL) has become an important method for self-supervised representation learning on graph-structured data. In node-level InfoNCE-based GCL, the same node under two augmented views is treated as a positive pair, while other nodes are treated as negatives. However, some node pairs treated as negatives may actually belong to the same class, causing the false negative problem. These false negatives introduce repulsive force between same-class nodes and may affect the learned representation space and downstream node classification performance.
Most existing false-negative handling methods rely on current embedding similarity or other static information to estimate the relation between node pairs. These signals are useful, but few studies systematically examine whether different types of label-free evidence can identify different false-negative candidates, and whether these signals are complementary when combined. This thesis therefore studies false-negative selection from three families of label-free signals: embedding-based signals, structural signals, and temporal training-dynamics signals.
We design several pair-level scores, including current embedding similarity, neighborhood overlap, drawdown, and trajectory variance. We first analyze the false-negative selection quality of each signal and then compare Union, Vote, and Intersect strategies under different selection budgets. The results show that embedding-based and structural signals usually provide more reliable candidates, while temporal signals provide distinct but less stable information. The three strategies show different trade-offs among precision, coverage, and downstream performance. With suitable budgets, the proposed multi-signal selection framework improves multiple GCL baselines and can be used as a flexible plug-and-play component for graph contrastive learning.
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dc.description.provenanceSubmitted by admin ntu (admin@lib.ntu.edu.tw) on 2026-08-10T16:29:52Z
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dc.description.tableofcontents摘要 i
Abstract iii
Contents v
List of Figures vii
List of Tables ix
Chapter 1 Introduction 1
1.1 Background . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
1.2 The False Negative Problem in GCL . . . . . . . . . . . . . . . . . . 2
1.3 Thesis Scope and Contributions . . . . . . . . . . . . . . . . . . . . 4
Chapter 2 Related Work 5
2.1 Self-supervised Graph Representation Learning . . . . . . . . . . . . 5
2.2 False Negative Problem and Mitigation in Graph Contrastive Learning 6
Chapter 3 Methodology 9
3.1 Preliminaries and Notation . . . . . . . . . . . . . . . . . . . . . . . 9
3.2 Overview of Multi-Signal False Negative Selection . . . . . . . . . . 12
3.3 Embedding-Based Signals . . . . . . . . . . . . . . . . . . . . . . . 15
3.4 Structural Signals . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17
3.5 Temporal Signals . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20
3.6 Multi-Signal Selection . . . . . . . . . . . . . . . . . . . . . . . . . 23
3.7 Handling Selected Pairs . . . . . . . . . . . . . . . . . . . . . . . . 26
3.8 Plug-in Usage and Scalability . . . . . . . . . . . . . . . . . . . . . 28
Chapter 4 Experiments and Results 29
4.1 Experimental Setup . . . . . . . . . . . . . . . . . . . . . . . . . . . 29
4.1.1 Datasets . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29
4.1.2 Evaluation Protocol . . . . . . . . . . . . . . . . . . . . . . . . . . 29
4.1.3 Implementation Details . . . . . . . . . . . . . . . . . . . . . . . . 30
4.1.4 Comparison Methods . . . . . . . . . . . . . . . . . . . . . . . . . 31
4.2 Main Results . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 32
4.3 Selection Strategy and Budget Comparison . . . . . . . . . . . . . . 32
4.4 Signal and Family Analysis . . . . . . . . . . . . . . . . . . . . . . 33
4.4.1 Single-Signal Quality Overview . . . . . . . . . . . . . . . . . . . 34
4.4.2 Family Complementarity Ablation . . . . . . . . . . . . . . . . . . 35
4.5 Selected-Pair Handling Ablation . . . . . . . . . . . . . . . . . . . . 37
4.6 Discussion and Limitations . . . . . . . . . . . . . . . . . . . . . . . 38
Chapter 5 Conclusion 41
References 43
Appendix A — Full Single-Signal Selection Results 47
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dc.language.isoen-
dc.subject圖神經網路-
dc.subject圖對比學習-
dc.subject偽陰性問題-
dc.subject多重訊號選擇-
dc.subjectGraph Neural Network-
dc.subjectGraph Contrastive Learning-
dc.subjectFalse Negative Problem-
dc.subjectMulti-Signal Selection-
dc.title基於多重訊號之圖對比學習偽陰性選擇zh_TW
dc.titleMulti-Signal False Negative Selection in Graph Contrastive Learningen
dc.typeThesis-
dc.date.schoolyear114-2-
dc.description.degree碩士-
dc.contributor.coadvisor張耀文zh_TW
dc.contributor.coadvisorYao-Wen Changen
dc.contributor.oralexamcommittee陳英一;陳俊良zh_TW
dc.contributor.oralexamcommitteeYing-i Chen;Jiann-Liang Chenen
dc.subject.keyword圖神經網路; 圖對比學習; 偽陰性問題; 多重訊號選擇zh_TW
dc.subject.keywordGraph Neural Network; Graph Contrastive Learning; False Negative Problem; Multi-Signal Selectionen
dc.relation.page48-
dc.identifier.doi10.6342/NTU202602733-
dc.rights.note同意授權(限校園內公開)-
dc.date.accepted2026-08-04-
dc.contributor.author-college重點科技研究學院-
dc.contributor.author-dept積體電路設計與自動化學位學程-
dc.date.embargo-lift2026-08-11-
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